RNA–Protein interactions for RNA: ENST00000532145.1

LRRK1-209, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-209ENST00000532145 ZSCAN23Q3MJ62 389 aa17.29■□□□□ 0.36
LRRK1-209ENST00000532145 NAP1L5Q96NT1 182 aaPredicted RBP17.29■□□□□ 0.36
LRRK1-209ENST00000532145 LRRCC1Q9C099 1032 aa17.29■□□□□ 0.36
LRRK1-209ENST00000532145 EXOC6BQ9Y2D4 811 aa17.29■□□□□ 0.36
LRRK1-209ENST00000532145 RIMS1Q86UR5 1692 aaKnown RBP17.29■□□□□ 0.36
LRRK1-209ENST00000532145 FLIIQ13045 1269 aa17.29■□□□□ 0.36
LRRK1-209ENST00000532145 LRRC37A3O60309 1634 aa17.29■□□□□ 0.36
LRRK1-209ENST00000532145 MCM2P49736 904 aa17.28■□□□□ 0.36
LRRK1-209ENST00000532145 CAVIN1Q6NZI2 390 aaKnown RBP17.28■□□□□ 0.36
LRRK1-209ENST00000532145 ESYT1Q9BSJ8 1104 aa17.28■□□□□ 0.36
LRRK1-209ENST00000532145 SOS1Q07889 1333 aaPredicted RBP17.28■□□□□ 0.36
LRRK1-209ENST00000532145 CCDC30Q5VVM6 783 aa17.28■□□□□ 0.36
LRRK1-209ENST00000532145 ANP32BQ92688 251 aaKnown RBP17.28■□□□□ 0.36
LRRK1-209ENST00000532145 MX1P20591 662 aa17.28■□□□□ 0.36
LRRK1-209ENST00000532145 ATP8B2P98198 1209 aa17.28■□□□□ 0.36
LRRK1-209ENST00000532145 TUBGCP6Q96RT7 1819 aa17.27■□□□□ 0.36
LRRK1-209ENST00000532145 IL17RAQ96F46 866 aa17.27■□□□□ 0.36
LRRK1-209ENST00000532145 NEK4P51957 841 aa17.27■□□□□ 0.35
LRRK1-209ENST00000532145 ANAPC15P60006 121 aa17.27■□□□□ 0.35
LRRK1-209ENST00000532145 TMX3Q96JJ7 454 aa17.27■□□□□ 0.35
LRRK1-209ENST00000532145 STAP2Q9UGK3 403 aa17.27■□□□□ 0.35
LRRK1-209ENST00000532145 PNMA6EA0A0J9YXQ4 647 aa17.26■□□□□ 0.35
LRRK1-209ENST00000532145 AMPHP49418 695 aa17.26■□□□□ 0.35
LRRK1-209ENST00000532145 FKBP5Q13451 457 aaPredicted RBP17.26■□□□□ 0.35
LRRK1-209ENST00000532145 PRPF40AO75400 957 aaKnown RBP17.26■□□□□ 0.35
LRRK1-209ENST00000532145 GPT2Q8TD30 523 aa17.26■□□□□ 0.35
LRRK1-209ENST00000532145 XRN1Q8IZH2 1706 aaKnown RBP17.26■□□□□ 0.35
LRRK1-209ENST00000532145 CUL4AQ13619 759 aa17.25■□□□□ 0.35
LRRK1-209ENST00000532145 TSHZ3Q63HK5 1081 aa17.25■□□□□ 0.35
LRRK1-209ENST00000532145 SLC26A8Q96RN1 970 aa17.25■□□□□ 0.35
LRRK1-209ENST00000532145 SRCIN1Q9C0H9 1055 aa17.25■□□□□ 0.35
LRRK1-209ENST00000532145 FAM208AQ9UK61 1670 aaKnown RBP17.25■□□□□ 0.35
LRRK1-209ENST00000532145 GNAT3A8MTJ3 354 aa17.25■□□□□ 0.35
LRRK1-209ENST00000532145 BABAM1Q9NWV8 329 aa17.25■□□□□ 0.35
LRRK1-209ENST00000532145 NCLP19338 710 aaKnown RBP17.24■□□□□ 0.35
LRRK1-209ENST00000532145 CHMLP26374 656 aa17.24■□□□□ 0.35
LRRK1-209ENST00000532145 AMOTL2Q9Y2J4 779 aa17.24■□□□□ 0.35
LRRK1-209ENST00000532145 PXDNLA1KZ92 1463 aa17.24■□□□□ 0.35
LRRK1-209ENST00000532145 MCCP23508 829 aa17.24■□□□□ 0.35
LRRK1-209ENST00000532145 ZSCAN30Q86W11 494 aa17.24■□□□□ 0.35
LRRK1-209ENST00000532145 NGDNQ8NEJ9 315 aaKnown RBP17.23■□□□□ 0.35
LRRK1-209ENST00000532145 INTS4Q96HW7 963 aaKnown RBP17.23■□□□□ 0.35
LRRK1-209ENST00000532145 PIK3C2AO00443 1686 aa17.23■□□□□ 0.35
LRRK1-209ENST00000532145 EPB41L2O43491 1005 aaKnown RBP17.23■□□□□ 0.35
LRRK1-209ENST00000532145 AOX1Q06278 1338 aa17.23■□□□□ 0.35
LRRK1-209ENST00000532145 PALD1Q9ULE6 856 aa17.23■□□□□ 0.35
LRRK1-209ENST00000532145 N4BP2Q86UW6 1770 aaPredicted RBP17.22■□□□□ 0.35
LRRK1-209ENST00000532145 BRD1O95696 1058 aa17.22■□□□□ 0.35
LRRK1-209ENST00000532145 HS1BP3Q53T59 392 aa17.22■□□□□ 0.35
LRRK1-209ENST00000532145 RBSNQ9H1K0 784 aa17.22■□□□□ 0.35
LRRK1-209ENST00000532145 TBX22Q9Y458 520 aa17.22■□□□□ 0.35
LRRK1-209ENST00000532145 DIP2AQ14689 1571 aa17.22■□□□□ 0.35
LRRK1-209ENST00000532145 PRIM1P49642 420 aaKnown RBP17.22■□□□□ 0.35
LRRK1-209ENST00000532145 IL17REQ8NFR9 667 aa17.22■□□□□ 0.35
LRRK1-209ENST00000532145 PDLIM2Q96JY6 352 aa17.22■□□□□ 0.35
LRRK1-209ENST00000532145 USP44Q9H0E7 712 aa17.22■□□□□ 0.35
LRRK1-209ENST00000532145 LRRFIP2Q9Y608 721 aaKnown RBP17.22■□□□□ 0.35
LRRK1-209ENST00000532145 EID1Q9Y6B2 187 aa17.22■□□□□ 0.35
LRRK1-209ENST00000532145 CACNA1FO60840 1977 aa17.22■□□□□ 0.35
LRRK1-209ENST00000532145 NWD1Q149M9 1564 aa17.21■□□□□ 0.35
LRRK1-209ENST00000532145 MAP3K5Q99683 1374 aa17.21■□□□□ 0.35
LRRK1-209ENST00000532145 ANO2Q9NQ90 1003 aa17.21■□□□□ 0.35
LRRK1-209ENST00000532145 HOXC9P31274 260 aa17.2■□□□□ 0.34
LRRK1-209ENST00000532145 TAF7Q15545 349 aaPredicted RBP17.2■□□□□ 0.34
LRRK1-209ENST00000532145 UBE2Q2Q8WVN8 375 aa17.2■□□□□ 0.34
LRRK1-209ENST00000532145 SLIT1O75093 1534 aa17.2■□□□□ 0.34
LRRK1-209ENST00000532145 TRIM6-TRIM34B2RNG4 842 aa17.2■□□□□ 0.34
LRRK1-209ENST00000532145 SSH3Q8TE77 659 aa17.2■□□□□ 0.34
LRRK1-209ENST00000532145 RILPL2Q969X0 211 aa17.2■□□□□ 0.34
LRRK1-209ENST00000532145 TMEM63CQ9P1W3 806 aa17.2■□□□□ 0.34
LRRK1-209ENST00000532145 ARHGAP23Q9P227 1491 aa17.19■□□□□ 0.34
LRRK1-209ENST00000532145 MBD3O95983 291 aa17.19■□□□□ 0.34
LRRK1-209ENST00000532145 RBM27Q9P2N5 1060 aaKnown RBP17.19■□□□□ 0.34
LRRK1-209ENST00000532145 NLRP6P59044 892 aa17.19■□□□□ 0.34
LRRK1-209ENST00000532145 LRSAM1Q6UWE0 723 aa17.19■□□□□ 0.34
LRRK1-209ENST00000532145 UBTFL1P0CB47 393 aaPredicted RBP17.18■□□□□ 0.34
LRRK1-209ENST00000532145 UNC5CLQ8IV45 518 aa17.18■□□□□ 0.34
LRRK1-209ENST00000532145 NECTIN2Q92692 538 aa17.18■□□□□ 0.34
LRRK1-209ENST00000532145 CHAMP1Q96JM3 812 aa17.18■□□□□ 0.34
LRRK1-209ENST00000532145 KIF13AQ9H1H9 1805 aa17.18■□□□□ 0.34
LRRK1-209ENST00000532145 NSFL1CQ9UNZ2 370 aaKnown RBP17.17■□□□□ 0.34
LRRK1-209ENST00000532145 RGPD8O14715 1765 aaPredicted RBP17.17■□□□□ 0.34
LRRK1-209ENST00000532145 ANKARQ7Z5J8 1434 aa17.17■□□□□ 0.34
LRRK1-209ENST00000532145 RAB11FIP3O75154 756 aa17.17■□□□□ 0.34
LRRK1-209ENST00000532145 HSPA4P34932 840 aa17.16■□□□□ 0.34
LRRK1-209ENST00000532145 POLA2Q14181 598 aa17.16■□□□□ 0.34
LRRK1-209ENST00000532145 USP54Q70EL1 1684 aa17.16■□□□□ 0.34
LRRK1-209ENST00000532145 MSNP26038 577 aaKnown RBP17.16■□□□□ 0.34
LRRK1-209ENST00000532145 MARF1Q9Y4F3 1742 aaKnown RBP17.15■□□□□ 0.34
LRRK1-209ENST00000532145 HDGFL1Q5TGJ6 251 aa17.15■□□□□ 0.34
LRRK1-209ENST00000532145 NOL7Q9UMY1 257 aaKnown RBP17.15■□□□□ 0.34
LRRK1-209ENST00000532145 SYCE3A1L190 88 aa17.15■□□□□ 0.34
LRRK1-209ENST00000532145 IL25Q9H293 177 aa17.15■□□□□ 0.34
LRRK1-209ENST00000532145 FOXD4L5Q5VV16 416 aaPredicted RBP17.14■□□□□ 0.33
LRRK1-209ENST00000532145 FOXD4L4Q8WXT5 416 aaPredicted RBP17.14■□□□□ 0.33
LRRK1-209ENST00000532145 IL1RAPL2Q9NP60 686 aa17.14■□□□□ 0.33
LRRK1-209ENST00000532145 CEMIPQ8WUJ3 1361 aa17.14■□□□□ 0.33
LRRK1-209ENST00000532145 OFD1O75665 1012 aa17.14■□□□□ 0.33
LRRK1-209ENST00000532145 PLEKHG5O94827 1062 aa17.14■□□□□ 0.33
LRRK1-209ENST00000532145 TPM2P07951 284 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms