RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 MED1Q15648 1581 aaPredicted RBP20.77■□□□□ 0.92
VPS26B-206ENST00000531741 PDE1AP54750 535 aa20.77■□□□□ 0.92
VPS26B-206ENST00000531741 CEMIPQ8WUJ3 1361 aa20.77■□□□□ 0.92
VPS26B-206ENST00000531741 SALL3Q9BXA9 1300 aa20.77■□□□□ 0.91
VPS26B-206ENST00000531741 PHF8Q9UPP1 1060 aa20.76■□□□□ 0.91
VPS26B-206ENST00000531741 FKBP5Q13451 457 aaPredicted RBP20.76■□□□□ 0.91
VPS26B-206ENST00000531741 ATP8B2P98198 1209 aa20.75■□□□□ 0.91
VPS26B-206ENST00000531741 SKOR2Q2VWA4 1001 aaPredicted RBP20.75■□□□□ 0.91
VPS26B-206ENST00000531741 IP6K1Q92551 441 aa20.75■□□□□ 0.91
VPS26B-206ENST00000531741 ZNF142P52746 1687 aaPredicted RBP20.75■□□□□ 0.91
VPS26B-206ENST00000531741 PLPPR3Q6T4P5 718 aa20.74■□□□□ 0.91
VPS26B-206ENST00000531741 ERC2O15083 957 aa20.74■□□□□ 0.91
VPS26B-206ENST00000531741 NUTM2GQ5VZR2 741 aa20.74■□□□□ 0.91
VPS26B-206ENST00000531741 APBB1O00213 710 aa20.73■□□□□ 0.91
VPS26B-206ENST00000531741 FAM43AQ8N2R8 423 aa20.73■□□□□ 0.91
VPS26B-206ENST00000531741 RTN4Q9NQC3 1192 aaKnown RBP20.73■□□□□ 0.91
VPS26B-206ENST00000531741 IBTKQ9P2D0 1353 aaPredicted RBP20.73■□□□□ 0.91
VPS26B-206ENST00000531741 LRRCC1Q9C099 1032 aa20.73■□□□□ 0.91
VPS26B-206ENST00000531741 HOXB7P09629 217 aa20.72■□□□□ 0.91
VPS26B-206ENST00000531741 CHMP4AQ9BY43 222 aa20.72■□□□□ 0.91
VPS26B-206ENST00000531741 ADGRL3Q9HAR2 1447 aa20.71■□□□□ 0.91
VPS26B-206ENST00000531741 KDM3BQ7LBC6 1761 aa20.71■□□□□ 0.91
VPS26B-206ENST00000531741 XRCC6P12956 609 aaKnown RBP eCLIP20.71■□□□□ 0.91
VPS26B-206ENST00000531741 ANKLE2Q86XL3 938 aa20.71■□□□□ 0.91
VPS26B-206ENST00000531741 ST18O60284 1047 aa20.7■□□□□ 0.9
VPS26B-206ENST00000531741 SRCIN1Q9C0H9 1055 aa20.7■□□□□ 0.9
VPS26B-206ENST00000531741 GZF1Q9H116 711 aaPredicted RBP20.7■□□□□ 0.9
VPS26B-206ENST00000531741 STAP2Q9UGK3 403 aa20.7■□□□□ 0.9
VPS26B-206ENST00000531741 LMO7Q8WWI1 1683 aa20.7■□□□□ 0.9
VPS26B-206ENST00000531741 MRE11P49959 708 aa20.69■□□□□ 0.9
VPS26B-206ENST00000531741 KCNH5Q8NCM2 988 aa20.69■□□□□ 0.9
VPS26B-206ENST00000531741 EXOC6BQ9Y2D4 811 aa20.69■□□□□ 0.9
VPS26B-206ENST00000531741 AOX1Q06278 1338 aa20.69■□□□□ 0.9
VPS26B-206ENST00000531741 PNMA6EA0A0J9YXQ4 647 aa20.69■□□□□ 0.9
VPS26B-206ENST00000531741 LTV1Q96GA3 475 aaPredicted RBP20.69■□□□□ 0.9
VPS26B-206ENST00000531741 USP44Q9H0E7 712 aa20.69■□□□□ 0.9
VPS26B-206ENST00000531741 CWC22Q9HCG8 908 aaKnown RBP20.69■□□□□ 0.9
VPS26B-206ENST00000531741 MX1P20591 662 aa20.68■□□□□ 0.9
VPS26B-206ENST00000531741 NUCB2P80303 420 aa20.68■□□□□ 0.9
VPS26B-206ENST00000531741 HDGFL1Q5TGJ6 251 aa20.68■□□□□ 0.9
VPS26B-206ENST00000531741 NCAPD2Q15021 1401 aa20.67■□□□□ 0.9
VPS26B-206ENST00000531741 FOXD4L1Q9NU39 408 aa20.67■□□□□ 0.9
VPS26B-206ENST00000531741 GOLGA6L22H0YM25 854 aa20.66■□□□□ 0.9
VPS26B-206ENST00000531741 SSH3Q8TE77 659 aa20.66■□□□□ 0.9
VPS26B-206ENST00000531741 LRRFIP2Q9Y608 721 aaKnown RBP20.66■□□□□ 0.9
VPS26B-206ENST00000531741 CYP2E1P05181 493 aaPredicted RBP20.66■□□□□ 0.9
VPS26B-206ENST00000531741 UBTFL1P0CB47 393 aaPredicted RBP20.66■□□□□ 0.9
VPS26B-206ENST00000531741 SSFA2P28290 1259 aa20.66■□□□□ 0.9
VPS26B-206ENST00000531741 EIF4A1P60842 406 aaKnown RBP20.65■□□□□ 0.9
VPS26B-206ENST00000531741 NBPF6Q5VWK0 638 aa20.65■□□□□ 0.9
VPS26B-206ENST00000531741 C14orf37Q86TY3 774 aa20.65■□□□□ 0.9
VPS26B-206ENST00000531741 NECTIN2Q92692 538 aa20.65■□□□□ 0.9
VPS26B-206ENST00000531741 NBPF4Q96M43 638 aa20.65■□□□□ 0.9
VPS26B-206ENST00000531741 OVOS2A0A0G2JMS6 1433 aa20.65■□□□□ 0.9
VPS26B-206ENST00000531741 EPB41L2O43491 1005 aaKnown RBP20.65■□□□□ 0.9
VPS26B-206ENST00000531741 USHBP1Q8N6Y0 703 aa20.65■□□□□ 0.9
VPS26B-206ENST00000531741 IL17RAQ96F46 866 aa20.65■□□□□ 0.9
VPS26B-206ENST00000531741 RAB11FIP3O75154 756 aa20.64■□□□□ 0.89
VPS26B-206ENST00000531741 ESYT1Q9BSJ8 1104 aa20.64■□□□□ 0.89
VPS26B-206ENST00000531741 SLIT3O75094 1523 aa20.64■□□□□ 0.89
VPS26B-206ENST00000531741 POLA2Q14181 598 aa20.63■□□□□ 0.89
VPS26B-206ENST00000531741 BAG4O95429 457 aaKnown RBP20.63■□□□□ 0.89
VPS26B-206ENST00000531741 ANAPC15P60006 121 aa20.63■□□□□ 0.89
VPS26B-206ENST00000531741 AKAP4Q5JQC9 854 aa20.63■□□□□ 0.89
VPS26B-206ENST00000531741 PSME1Q06323 249 aa20.62■□□□□ 0.89
VPS26B-206ENST00000531741 GRPEL1Q9HAV7 217 aa20.62■□□□□ 0.89
VPS26B-206ENST00000531741 MCM2P49736 904 aa20.62■□□□□ 0.89
VPS26B-206ENST00000531741 PHAXQ9H814 394 aaKnown RBP20.62■□□□□ 0.89
VPS26B-206ENST00000531741 LMTK3Q96Q04 1460 aa20.61■□□□□ 0.89
VPS26B-206ENST00000531741 RGPD2P0DJD1 1756 aa20.61■□□□□ 0.89
VPS26B-206ENST00000531741 CHMLP26374 656 aa20.61■□□□□ 0.89
VPS26B-206ENST00000531741 AMOTQ4VCS5 1084 aa20.61■□□□□ 0.89
VPS26B-206ENST00000531741 CAMTA1Q9Y6Y1 1673 aa20.61■□□□□ 0.89
VPS26B-206ENST00000531741 KLHL40Q2TBA0 621 aa20.6■□□□□ 0.89
VPS26B-206ENST00000531741 MCCP23508 829 aa20.6■□□□□ 0.89
VPS26B-206ENST00000531741 PLEKHO1Q53GL0 409 aaPredicted RBP20.6■□□□□ 0.89
VPS26B-206ENST00000531741 ESCO1Q5FWF5 840 aa20.6■□□□□ 0.89
VPS26B-206ENST00000531741 LGR6Q9HBX8 967 aa20.6■□□□□ 0.89
VPS26B-206ENST00000531741 BEND3Q5T5X7 828 aa20.58■□□□□ 0.89
VPS26B-206ENST00000531741 SETD1BQ9UPS6 1966 aaKnown RBP20.58■□□□□ 0.89
VPS26B-206ENST00000531741 TSHZ3Q63HK5 1081 aa20.58■□□□□ 0.88
VPS26B-206ENST00000531741 ARHGEF25Q86VW2 580 aa20.58■□□□□ 0.88
VPS26B-206ENST00000531741 DNAAF4Q8WXU2 420 aa20.58■□□□□ 0.88
VPS26B-206ENST00000531741 PANK2Q9BZ23 570 aa20.58■□□□□ 0.88
VPS26B-206ENST00000531741 PPP1R42Q7Z4L9 355 aa20.57■□□□□ 0.88
VPS26B-206ENST00000531741 TEFQ10587 303 aa20.57■□□□□ 0.88
VPS26B-206ENST00000531741 ZNF530Q6P9A1 599 aaPredicted RBP20.57■□□□□ 0.88
VPS26B-206ENST00000531741 CHPF2Q9P2E5 772 aa20.57■□□□□ 0.88
VPS26B-206ENST00000531741 AK9Q5TCS8 1911 aa20.56■□□□□ 0.88
VPS26B-206ENST00000531741 HEG1Q9ULI3 1381 aa20.56■□□□□ 0.88
VPS26B-206ENST00000531741 ADAMTSL3P82987 1691 aa20.56■□□□□ 0.88
VPS26B-206ENST00000531741 BTBD11A6QL63 1104 aa20.55■□□□□ 0.88
VPS26B-206ENST00000531741 TRIM6-TRIM34B2RNG4 842 aa20.55■□□□□ 0.88
VPS26B-206ENST00000531741 GCP02774 474 aa20.55■□□□□ 0.88
VPS26B-206ENST00000531741 EIF2S2P20042 333 aaKnown RBP20.55■□□□□ 0.88
VPS26B-206ENST00000531741 KIF1BPQ96EK5 621 aa20.55■□□□□ 0.88
VPS26B-206ENST00000531741 HSP90AB4PQ58FF6 505 aa20.55■□□□□ 0.88
VPS26B-206ENST00000531741 RHPN1Q8TCX5 695 aa20.55■□□□□ 0.88
VPS26B-206ENST00000531741 RILPL2Q969X0 211 aa20.55■□□□□ 0.88
VPS26B-206ENST00000531741 ADAMTS7Q9UKP4 1686 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms