RNA–Protein interactions for RNA: ENST00000531598.6

NPIPA3-202, Transcript of nuclear pore complex interacting protein family member A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NPIPA3, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3-202ENST00000531598 BTBD11A6QL63 1104 aa12.15□□□□□ -0.46
NPIPA3-202ENST00000531598 HMMRO75330 724 aa12.15□□□□□ -0.46
NPIPA3-202ENST00000531598 DDRGK1Q96HY6 314 aa12.15□□□□□ -0.46
NPIPA3-202ENST00000531598 PRDM11Q9NQV5 511 aa12.15□□□□□ -0.46
NPIPA3-202ENST00000531598 TNNQ9UQP3 1299 aa12.15□□□□□ -0.46
NPIPA3-202ENST00000531598 AXIN2Q9Y2T1 843 aa12.15□□□□□ -0.46
NPIPA3-202ENST00000531598 XIRP1Q702N8 1843 aaKnown RBP12.15□□□□□ -0.46
NPIPA3-202ENST00000531598 GNAI3P08754 354 aa12.14□□□□□ -0.47
NPIPA3-202ENST00000531598 HDGFL1Q5TGJ6 251 aa12.14□□□□□ -0.47
NPIPA3-202ENST00000531598 DCAF5Q96JK2 942 aa12.14□□□□□ -0.47
NPIPA3-202ENST00000531598 ZBTB47Q9UFB7 747 aaPredicted RBP12.14□□□□□ -0.47
NPIPA3-202ENST00000531598 WDR17Q8IZU2 1322 aa12.13□□□□□ -0.47
NPIPA3-202ENST00000531598 EIF4A1P60842 406 aaKnown RBP12.13□□□□□ -0.47
NPIPA3-202ENST00000531598 PDZRN3Q9UPQ7 1066 aa12.13□□□□□ -0.47
NPIPA3-202ENST00000531598 CRYBG1Q9Y4K1 1723 aa12.13□□□□□ -0.47
NPIPA3-202ENST00000531598 ADAMTS7Q9UKP4 1686 aa12.13□□□□□ -0.47
NPIPA3-202ENST00000531598 COL18A1P39060 1754 aa12.13□□□□□ -0.47
NPIPA3-202ENST00000531598 NHSL1Q5SYE7 1610 aa12.12□□□□□ -0.47
NPIPA3-202ENST00000531598 RGS3P49796 1198 aa12.12□□□□□ -0.47
NPIPA3-202ENST00000531598 FLIIQ13045 1269 aa12.12□□□□□ -0.47
NPIPA3-202ENST00000531598 CARD10Q9BWT7 1032 aa12.12□□□□□ -0.47
NPIPA3-202ENST00000531598 UPF2Q9HAU5 1272 aaKnown RBP12.12□□□□□ -0.47
NPIPA3-202ENST00000531598 IBTKQ9P2D0 1353 aaPredicted RBP12.12□□□□□ -0.47
NPIPA3-202ENST00000531598 RGS12O14924 1447 aa12.11□□□□□ -0.47
NPIPA3-202ENST00000531598 PHKG2P15735 406 aa12.11□□□□□ -0.47
NPIPA3-202ENST00000531598 NUCB1Q02818 461 aa12.11□□□□□ -0.47
NPIPA3-202ENST00000531598 MIS18AQ9NYP9 233 aa12.11□□□□□ -0.47
NPIPA3-202ENST00000531598 DBF4Q9UBU7 674 aaPredicted RBP12.11□□□□□ -0.47
NPIPA3-202ENST00000531598 PCDH11XQ9BZA7 1347 aa12.11□□□□□ -0.47
NPIPA3-202ENST00000531598 PCDH11YQ9BZA8 1340 aa12.11□□□□□ -0.47
NPIPA3-202ENST00000531598 HEG1Q9ULI3 1381 aa12.1□□□□□ -0.47
NPIPA3-202ENST00000531598 FKBP5Q13451 457 aaPredicted RBP12.1□□□□□ -0.47
NPIPA3-202ENST00000531598 MPRIPQ6WCQ1 1025 aa12.1□□□□□ -0.47
NPIPA3-202ENST00000531598 ANKRD44Q8N8A2 993 aa12.1□□□□□ -0.47
NPIPA3-202ENST00000531598 DDX17Q92841 729 aaKnown RBP12.1□□□□□ -0.47
NPIPA3-202ENST00000531598 SLC52A2Q9HAB3 445 aa12.1□□□□□ -0.47
NPIPA3-202ENST00000531598 HYPKQ9NX55 129 aa12.1□□□□□ -0.47
NPIPA3-202ENST00000531598 MRC1P22897 1456 aa12.09□□□□□ -0.47
NPIPA3-202ENST00000531598 AHDC1Q5TGY3 1603 aaPredicted RBP12.09□□□□□ -0.47
NPIPA3-202ENST00000531598 DDX58O95786 925 aaKnown RBP12.09□□□□□ -0.47
NPIPA3-202ENST00000531598 GNAI2P04899 355 aa12.09□□□□□ -0.47
NPIPA3-202ENST00000531598 KRT24Q2M2I5 525 aa12.09□□□□□ -0.47
NPIPA3-202ENST00000531598 CHD1LQ86WJ1 897 aa12.09□□□□□ -0.47
NPIPA3-202ENST00000531598 LGR6Q9HBX8 967 aa12.09□□□□□ -0.47
NPIPA3-202ENST00000531598 KDM3BQ7LBC6 1761 aa12.09□□□□□ -0.47
NPIPA3-202ENST00000531598 COL5A2P05997 1499 aaPredicted RBP12.08□□□□□ -0.47
NPIPA3-202ENST00000531598 TOM1L2Q6ZVM7 507 aa12.08□□□□□ -0.48
NPIPA3-202ENST00000531598 ERICH6Q7L0X2 663 aa12.08□□□□□ -0.48
NPIPA3-202ENST00000531598 CABLES1Q8TDN4 633 aa12.08□□□□□ -0.48
NPIPA3-202ENST00000531598 IPO9Q96P70 1041 aaKnown RBP12.08□□□□□ -0.48
NPIPA3-202ENST00000531598 CACNA1FO60840 1977 aa12.08□□□□□ -0.48
NPIPA3-202ENST00000531598 ERBB4Q15303 1308 aa12.08□□□□□ -0.48
NPIPA3-202ENST00000531598 ERVV-2B6SEH9 535 aa12.07□□□□□ -0.48
NPIPA3-202ENST00000531598 GIGYF1O75420 1035 aaPredicted RBP12.07□□□□□ -0.48
NPIPA3-202ENST00000531598 IL2RBP14784 551 aa12.07□□□□□ -0.48
NPIPA3-202ENST00000531598 EVA1CP58658 441 aa12.07□□□□□ -0.48
NPIPA3-202ENST00000531598 C8orf34Q49A92 452 aa12.07□□□□□ -0.48
NPIPA3-202ENST00000531598 PKD1L3Q7Z443 1732 aa12.07□□□□□ -0.48
NPIPA3-202ENST00000531598 TTC5Q8N0Z6 440 aa12.07□□□□□ -0.48
NPIPA3-202ENST00000531598 DCTPP1Q9H773 170 aa12.07□□□□□ -0.48
NPIPA3-202ENST00000531598 ATP10DQ9P241 1426 aa12.07□□□□□ -0.48
NPIPA3-202ENST00000531598 MEGF6O75095 1541 aa12.06□□□□□ -0.48
NPIPA3-202ENST00000531598 PARP4Q9UKK3 1724 aaKnown RBP12.06□□□□□ -0.48
NPIPA3-202ENST00000531598 NKX1-1Q15270 411 aaPredicted RBP12.06□□□□□ -0.48
NPIPA3-202ENST00000531598 CHRNA2Q15822 529 aa12.06□□□□□ -0.48
NPIPA3-202ENST00000531598 ZNF790Q6PG37 636 aa12.06□□□□□ -0.48
NPIPA3-202ENST00000531598 ZCRB1Q8TBF4 217 aaKnown RBP12.06□□□□□ -0.48
NPIPA3-202ENST00000531598 CDCA7Q9BWT1 371 aaPredicted RBP12.06□□□□□ -0.48
NPIPA3-202ENST00000531598 SRCIN1Q9C0H9 1055 aa12.06□□□□□ -0.48
NPIPA3-202ENST00000531598 ALDH1L1O75891 902 aa12.05□□□□□ -0.48
NPIPA3-202ENST00000531598 PLEKHG5O94827 1062 aa12.05□□□□□ -0.48
NPIPA3-202ENST00000531598 CEP85Q6P2H3 762 aa12.05□□□□□ -0.48
NPIPA3-202ENST00000531598 SLC4A10Q6U841 1118 aa12.05□□□□□ -0.48
NPIPA3-202ENST00000531598 FMNL2Q96PY5 1086 aa12.05□□□□□ -0.48
NPIPA3-202ENST00000531598 DDX21Q9NR30 783 aaKnown RBP eCLIP12.05□□□□□ -0.48
NPIPA3-202ENST00000531598 SNRPA1P09661 255 aaKnown RBP12.04□□□□□ -0.48
NPIPA3-202ENST00000531598 CABP4P57796 275 aa12.04□□□□□ -0.48
NPIPA3-202ENST00000531598 BMP2KLQ5H9B9 411 aa12.04□□□□□ -0.48
NPIPA3-202ENST00000531598 ANKRD45Q5TZF3 282 aa12.04□□□□□ -0.48
NPIPA3-202ENST00000531598 G2E3Q7L622 706 aa12.04□□□□□ -0.48
NPIPA3-202ENST00000531598 DNAAF4Q8WXU2 420 aa12.04□□□□□ -0.48
NPIPA3-202ENST00000531598 COL22A1Q8NFW1 1626 aaPredicted RBP12.04□□□□□ -0.48
NPIPA3-202ENST00000531598 KDM6AO15550 1401 aaPredicted RBP12.03□□□□□ -0.48
NPIPA3-202ENST00000531598 RGPD2P0DJD1 1756 aa12.03□□□□□ -0.48
NPIPA3-202ENST00000531598 TOM1O60784 492 aa12.03□□□□□ -0.48
NPIPA3-202ENST00000531598 UBTFL1P0CB47 393 aaPredicted RBP12.03□□□□□ -0.48
NPIPA3-202ENST00000531598 EIF2S2P20042 333 aaKnown RBP12.03□□□□□ -0.48
NPIPA3-202ENST00000531598 HSP90AB4PQ58FF6 505 aa12.03□□□□□ -0.48
NPIPA3-202ENST00000531598 LTBP4Q8N2S1 1624 aa12.03□□□□□ -0.48
NPIPA3-202ENST00000531598 ABCA3Q99758 1704 aa12.03□□□□□ -0.48
NPIPA3-202ENST00000531598 COL14A1Q05707 1796 aaKnown RBP12.02□□□□□ -0.48
NPIPA3-202ENST00000531598 CYP27B1O15528 508 aa12.02□□□□□ -0.49
NPIPA3-202ENST00000531598 KSR2Q6VAB6 950 aa12.02□□□□□ -0.49
NPIPA3-202ENST00000531598 MEIS3Q99687 375 aa12.02□□□□□ -0.49
NPIPA3-202ENST00000531598 CHPF2Q9P2E5 772 aa12.02□□□□□ -0.49
NPIPA3-202ENST00000531598 DAXXQ9UER7 740 aaPredicted RBP12.02□□□□□ -0.49
NPIPA3-202ENST00000531598 NOP58Q9Y2X3 529 aaKnown RBP12.02□□□□□ -0.49
NPIPA3-202ENST00000531598 SIPA1L3O60292 1781 aaPredicted RBP12.02□□□□□ -0.49
NPIPA3-202ENST00000531598 N4BP2Q86UW6 1770 aaPredicted RBP12.02□□□□□ -0.49
NPIPA3-202ENST00000531598 RAB11FIP3O75154 756 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms