RNA–Protein interactions for RNA: ENST00000531346.1

TMEM136-205, Transcript of transmembrane protein 136, humanhuman

TSL 2

Gene TMEM136, Length 3,776 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM136-205ENST00000531346 COL3A1P02461 1466 aaPredicted RBP13.1□□□□□ -0.31
TMEM136-205ENST00000531346 WDR63Q8IWG1 891 aa13.1□□□□□ -0.31
TMEM136-205ENST00000531346 DCTN1Q14203 1278 aa13.09□□□□□ -0.31
TMEM136-205ENST00000531346 FLAD1Q8NFF5 587 aa13.09□□□□□ -0.31
TMEM136-205ENST00000531346 LGR6Q9HBX8 967 aa13.09□□□□□ -0.31
TMEM136-205ENST00000531346 NPHP1O15259 732 aa13.09□□□□□ -0.31
TMEM136-205ENST00000531346 SOCS7O14512 581 aa13.08□□□□□ -0.31
TMEM136-205ENST00000531346 IFT57Q9NWB7 429 aa13.08□□□□□ -0.31
TMEM136-205ENST00000531346 E9PSI1 815 aa13.08□□□□□ -0.32
TMEM136-205ENST00000531346 PLSCR1O15162 318 aa13.08□□□□□ -0.32
TMEM136-205ENST00000531346 SNRPA1P09661 255 aaKnown RBP13.08□□□□□ -0.32
TMEM136-205ENST00000531346 EN1Q05925 392 aaPredicted RBP13.08□□□□□ -0.32
TMEM136-205ENST00000531346 CCDC27Q2M243 656 aa13.08□□□□□ -0.32
TMEM136-205ENST00000531346 PIGBQ92521 554 aa13.08□□□□□ -0.32
TMEM136-205ENST00000531346 PALLDQ8WX93 1383 aa13.08□□□□□ -0.32
TMEM136-205ENST00000531346 PLEKHF1Q96S99 279 aa13.08□□□□□ -0.32
TMEM136-205ENST00000531346 KCNQ2O43526 872 aa13.07□□□□□ -0.32
TMEM136-205ENST00000531346 TXNRD1Q16881 649 aa13.07□□□□□ -0.32
TMEM136-205ENST00000531346 UPF1Q92900 1129 aaKnown RBP eCLIP13.07□□□□□ -0.32
TMEM136-205ENST00000531346 LOC102724428A0A0B4J2F2 783 aa13.07□□□□□ -0.32
TMEM136-205ENST00000531346 SIK1P57059 783 aa13.07□□□□□ -0.32
TMEM136-205ENST00000531346 IL17REQ8NFR9 667 aa13.07□□□□□ -0.32
TMEM136-205ENST00000531346 SENP3-EIF4A1A0A087X0R7 540 aa13.07□□□□□ -0.32
TMEM136-205ENST00000531346 ZNF790Q6PG37 636 aa13.07□□□□□ -0.32
TMEM136-205ENST00000531346 TFCP2L1Q9NZI6 479 aa13.07□□□□□ -0.32
TMEM136-205ENST00000531346 IL16Q14005 1332 aa13.07□□□□□ -0.32
TMEM136-205ENST00000531346 A0A087WZG4 1122 aa13.06□□□□□ -0.32
TMEM136-205ENST00000531346 CFAP44Q96MT7 982 aa13.06□□□□□ -0.32
TMEM136-205ENST00000531346 EIF2S2P20042 333 aaKnown RBP13.06□□□□□ -0.32
TMEM136-205ENST00000531346 CANXP27824 592 aaKnown RBP13.06□□□□□ -0.32
TMEM136-205ENST00000531346 SLC39A6Q13433 755 aa13.06□□□□□ -0.32
TMEM136-205ENST00000531346 THUMPD2Q9BTF0 503 aaKnown RBP13.06□□□□□ -0.32
TMEM136-205ENST00000531346 RTCBQ9Y3I0 505 aaKnown RBP13.05□□□□□ -0.32
TMEM136-205ENST00000531346 ILDR2Q71H61 639 aa13.05□□□□□ -0.32
TMEM136-205ENST00000531346 BCL9O00512 1426 aa13.05□□□□□ -0.32
TMEM136-205ENST00000531346 DEFB132Q7Z7B7 95 aa13.05□□□□□ -0.32
TMEM136-205ENST00000531346 WWC1Q8IX03 1113 aa13.05□□□□□ -0.32
TMEM136-205ENST00000531346 ASAP1Q9ULH1 1129 aa13.04□□□□□ -0.32
TMEM136-205ENST00000531346 VSIG10Q8N0Z9 540 aa13.04□□□□□ -0.32
TMEM136-205ENST00000531346 DDX58O95786 925 aaKnown RBP13.03□□□□□ -0.32
TMEM136-205ENST00000531346 CCDC30Q5VVM6 783 aa13.03□□□□□ -0.32
TMEM136-205ENST00000531346 ZPR1O75312 459 aa13.03□□□□□ -0.32
TMEM136-205ENST00000531346 HDGFL1Q5TGJ6 251 aa13.03□□□□□ -0.32
TMEM136-205ENST00000531346 ATG3Q9NT62 314 aa13.03□□□□□ -0.32
TMEM136-205ENST00000531346 SOS1Q07889 1333 aaPredicted RBP13.03□□□□□ -0.32
TMEM136-205ENST00000531346 KIF6Q6ZMV9 814 aa13.02□□□□□ -0.32
TMEM136-205ENST00000531346 EZH2Q15910 746 aaKnown RBP13.02□□□□□ -0.33
TMEM136-205ENST00000531346 RFC4P35249 363 aa13.02□□□□□ -0.33
TMEM136-205ENST00000531346 MIS18AQ9NYP9 233 aa13.02□□□□□ -0.33
TMEM136-205ENST00000531346 ZNF652Q9Y2D9 606 aa13.02□□□□□ -0.33
TMEM136-205ENST00000531346 GNPATO15228 680 aa13.01□□□□□ -0.33
TMEM136-205ENST00000531346 THSD7AQ9UPZ6 1657 aa13.01□□□□□ -0.33
TMEM136-205ENST00000531346 ELL2O00472 640 aaPredicted RBP13.01□□□□□ -0.33
TMEM136-205ENST00000531346 POLD1P28340 1107 aa13.01□□□□□ -0.33
TMEM136-205ENST00000531346 TRAPPC3LQ5T215 181 aa13.01□□□□□ -0.33
TMEM136-205ENST00000531346 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.01□□□□□ -0.33
TMEM136-205ENST00000531346 CCDC87Q9NVE4 849 aa13.01□□□□□ -0.33
TMEM136-205ENST00000531346 DCAF8L1A6NGE4 600 aa13□□□□□ -0.33
TMEM136-205ENST00000531346 HOXB7P09629 217 aa13□□□□□ -0.33
TMEM136-205ENST00000531346 ZNF496Q96IT1 587 aaPredicted RBP13□□□□□ -0.33
TMEM136-205ENST00000531346 DNAJC10Q8IXB1 793 aa13□□□□□ -0.33
TMEM136-205ENST00000531346 CENPBP07199 599 aaPredicted RBP13□□□□□ -0.33
TMEM136-205ENST00000531346 GTF2E1P29083 439 aaPredicted RBP13□□□□□ -0.33
TMEM136-205ENST00000531346 RGPD2P0DJD1 1756 aa13□□□□□ -0.33
TMEM136-205ENST00000531346 LRRC37A3O60309 1634 aa12.99□□□□□ -0.33
TMEM136-205ENST00000531346 CHL1O00533 1208 aa12.99□□□□□ -0.33
TMEM136-205ENST00000531346 TWISTNBQ3B726 338 aaPredicted RBP12.99□□□□□ -0.33
TMEM136-205ENST00000531346 DUSP27Q5VZP5 1158 aa12.99□□□□□ -0.33
TMEM136-205ENST00000531346 PPP1R1BQ9UD71 204 aaPredicted RBP12.99□□□□□ -0.33
TMEM136-205ENST00000531346 TRIM35Q9UPQ4 493 aa12.99□□□□□ -0.33
TMEM136-205ENST00000531346 ZNF428Q96B54 188 aa12.99□□□□□ -0.33
TMEM136-205ENST00000531346 ERBB4Q15303 1308 aa12.98□□□□□ -0.33
TMEM136-205ENST00000531346 CEMIPQ8WUJ3 1361 aa12.98□□□□□ -0.33
TMEM136-205ENST00000531346 HEG1Q9ULI3 1381 aa12.98□□□□□ -0.33
TMEM136-205ENST00000531346 ZBED9Q6R2W3 1325 aa12.98□□□□□ -0.33
TMEM136-205ENST00000531346 PHF14O94880 888 aa12.98□□□□□ -0.33
TMEM136-205ENST00000531346 CT47B1P0C2W7 299 aaPredicted RBP12.98□□□□□ -0.33
TMEM136-205ENST00000531346 KDM6AO15550 1401 aaPredicted RBP12.98□□□□□ -0.33
TMEM136-205ENST00000531346 ADRA2BP18089 450 aa12.98□□□□□ -0.33
TMEM136-205ENST00000531346 NEXNQ0ZGT2 675 aa12.97□□□□□ -0.33
TMEM136-205ENST00000531346 RC3H1Q5TC82 1133 aaKnown RBP12.97□□□□□ -0.33
TMEM136-205ENST00000531346 MBIPQ9NS73 344 aa12.97□□□□□ -0.33
TMEM136-205ENST00000531346 DBF4Q9UBU7 674 aaPredicted RBP12.97□□□□□ -0.33
TMEM136-205ENST00000531346 IPO8O15397 1037 aaKnown RBP12.97□□□□□ -0.33
TMEM136-205ENST00000531346 NECTIN2Q92692 538 aa12.97□□□□□ -0.33
TMEM136-205ENST00000531346 MS4A1P11836 297 aa12.97□□□□□ -0.33
TMEM136-205ENST00000531346 EIF4A1P60842 406 aaKnown RBP12.97□□□□□ -0.33
TMEM136-205ENST00000531346 HSP90AB3PQ58FF7 597 aa12.96□□□□□ -0.33
TMEM136-205ENST00000531346 HYPKQ9NX55 129 aa12.96□□□□□ -0.33
TMEM136-205ENST00000531346 HSP90B1P14625 803 aaKnown RBP12.96□□□□□ -0.33
TMEM136-205ENST00000531346 SLC15A2Q16348 729 aa12.96□□□□□ -0.33
TMEM136-205ENST00000531346 CAMKK2Q96RR4 588 aa12.96□□□□□ -0.33
TMEM136-205ENST00000531346 EXOSC9Q06265 439 aaKnown RBP12.96□□□□□ -0.34
TMEM136-205ENST00000531346 SLC16A10Q8TF71 515 aa12.96□□□□□ -0.34
TMEM136-205ENST00000531346 TSR2Q969E8 191 aaKnown RBP12.96□□□□□ -0.34
TMEM136-205ENST00000531346 RPS6KA4O75676 772 aa12.95□□□□□ -0.34
TMEM136-205ENST00000531346 RGPD1P0DJD0 1748 aa12.95□□□□□ -0.34
TMEM136-205ENST00000531346 SSFA2P28290 1259 aa12.95□□□□□ -0.34
TMEM136-205ENST00000531346 CRKLP46109 303 aaKnown RBP12.95□□□□□ -0.34
TMEM136-205ENST00000531346 MYL6BP14649 208 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms