RNA–Protein interactions for RNA: ENST00000531238.1

RELA-216, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-216ENST00000531238 AMIGO3Q86WK7 504 aa21.69■■□□□ 1.06
RELA-216ENST00000531238 LINC00116Q8NCU8 138 aa21.69■■□□□ 1.06
RELA-216ENST00000531238 GAS2L2Q8NHY3 880 aa21.69■■□□□ 1.06
RELA-216ENST00000531238 PNPLA7Q6ZV29 1317 aa21.69■■□□□ 1.06
RELA-216ENST00000531238 GNAT3A8MTJ3 354 aa21.68■■□□□ 1.06
RELA-216ENST00000531238 SMIM5Q71RC9 77 aa21.68■■□□□ 1.06
RELA-216ENST00000531238 PLEKHF1Q96S99 279 aa21.68■■□□□ 1.06
RELA-216ENST00000531238 TFCP2L1Q9NZI6 479 aa21.68■■□□□ 1.06
RELA-216ENST00000531238 CASZ1Q86V15 1759 aa21.68■■□□□ 1.06
RELA-216ENST00000531238 ATP6V1AP38606 617 aa21.67■■□□□ 1.06
RELA-216ENST00000531238 ATF5Q9Y2D1 282 aaPredicted RBP21.67■■□□□ 1.06
RELA-216ENST00000531238 RBM42Q9BTD8 480 aaKnown RBP21.66■■□□□ 1.06
RELA-216ENST00000531238 SCN11AQ9UI33 1791 aa21.66■■□□□ 1.06
RELA-216ENST00000531238 MAP3K5Q99683 1374 aa21.65■■□□□ 1.06
RELA-216ENST00000531238 SLC39A6Q13433 755 aa21.65■■□□□ 1.06
RELA-216ENST00000531238 COL23A1Q86Y22 540 aaPredicted RBP21.65■■□□□ 1.06
RELA-216ENST00000531238 SPON1Q9HCB6 807 aa21.65■■□□□ 1.06
RELA-216ENST00000531238 ADAMTS7Q9UKP4 1686 aa21.64■■□□□ 1.05
RELA-216ENST00000531238 PTCD1O75127 700 aaKnown RBP21.64■■□□□ 1.05
RELA-216ENST00000531238 PTGER2P43116 358 aa21.64■■□□□ 1.05
RELA-216ENST00000531238 LRP5O75197 1615 aa21.63■■□□□ 1.05
RELA-216ENST00000531238 SGIP1Q9BQI5 828 aa21.62■■□□□ 1.05
RELA-216ENST00000531238 TAF1LQ8IZX4 1826 aa21.62■■□□□ 1.05
RELA-216ENST00000531238 MRC1P22897 1456 aa21.61■■□□□ 1.05
RELA-216ENST00000531238 DCTN1Q14203 1278 aa21.61■■□□□ 1.05
RELA-216ENST00000531238 MTFR1LQ9H019 292 aa21.61■■□□□ 1.05
RELA-216ENST00000531238 C5P01031 1676 aa21.6■■□□□ 1.05
RELA-216ENST00000531238 MCM10Q7L590 875 aa21.6■■□□□ 1.05
RELA-216ENST00000531238 CEMIPQ8WUJ3 1361 aa21.6■■□□□ 1.05
RELA-216ENST00000531238 TUBGCP6Q96RT7 1819 aa21.59■■□□□ 1.05
RELA-216ENST00000531238 CCDC184Q52MB2 194 aa21.59■■□□□ 1.05
RELA-216ENST00000531238 C4BP0C0L5 1744 aa21.58■■□□□ 1.05
RELA-216ENST00000531238 AK7Q96M32 723 aa21.58■■□□□ 1.05
RELA-216ENST00000531238 KCNQ3O43525 872 aa21.57■■□□□ 1.04
RELA-216ENST00000531238 TEFQ10587 303 aa21.57■■□□□ 1.04
RELA-216ENST00000531238 SLC16A10Q8TF71 515 aa21.57■■□□□ 1.04
RELA-216ENST00000531238 ADAMTS8Q9UP79 889 aa21.57■■□□□ 1.04
RELA-216ENST00000531238 VIRMAQ69YN4 1812 aaKnown RBP21.57■■□□□ 1.04
RELA-216ENST00000531238 QSER1Q2KHR3 1735 aa21.56■■□□□ 1.04
RELA-216ENST00000531238 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.55■■□□□ 1.04
RELA-216ENST00000531238 MSH5O43196 834 aa21.55■■□□□ 1.04
RELA-216ENST00000531238 HTATSF1O43719 755 aaKnown RBP21.55■■□□□ 1.04
RELA-216ENST00000531238 PHF14O94880 888 aa21.55■■□□□ 1.04
RELA-216ENST00000531238 HMGB2P26583 209 aaKnown RBP21.55■■□□□ 1.04
RELA-216ENST00000531238 NFE2L2Q16236 605 aa21.55■■□□□ 1.04
RELA-216ENST00000531238 RC3H1Q5TC82 1133 aaKnown RBP21.55■■□□□ 1.04
RELA-216ENST00000531238 DNAJC10Q8IXB1 793 aa21.55■■□□□ 1.04
RELA-216ENST00000531238 GNPATO15228 680 aa21.54■■□□□ 1.04
RELA-216ENST00000531238 ZNF790Q6PG37 636 aa21.54■■□□□ 1.04
RELA-216ENST00000531238 RTF1Q92541 710 aaKnown RBP21.54■■□□□ 1.04
RELA-216ENST00000531238 KCPQ6ZWJ8 1503 aa21.54■■□□□ 1.04
RELA-216ENST00000531238 INTS5Q6P9B9 1019 aaKnown RBP21.53■■□□□ 1.04
RELA-216ENST00000531238 CCDC146Q8IYE0 955 aa21.53■■□□□ 1.04
RELA-216ENST00000531238 FLAD1Q8NFF5 587 aa21.53■■□□□ 1.04
RELA-216ENST00000531238 ZNF496Q96IT1 587 aaPredicted RBP21.53■■□□□ 1.04
RELA-216ENST00000531238 PNNQ9H307 717 aaKnown RBP21.53■■□□□ 1.04
RELA-216ENST00000531238 ZNF831Q5JPB2 1677 aa21.53■■□□□ 1.04
RELA-216ENST00000531238 BTBD11A6QL63 1104 aa21.52■■□□□ 1.04
RELA-216ENST00000531238 SSFA2P28290 1259 aa21.52■■□□□ 1.04
RELA-216ENST00000531238 CRKLP46109 303 aaKnown RBP21.52■■□□□ 1.04
RELA-216ENST00000531238 CNTNAP4Q9C0A0 1308 aa21.52■■□□□ 1.03
RELA-216ENST00000531238 RPS6KA4O75676 772 aa21.51■■□□□ 1.03
RELA-216ENST00000531238 CYP19A1P11511 503 aaPredicted RBP21.51■■□□□ 1.03
RELA-216ENST00000531238 MSL1Q68DK7 614 aa21.51■■□□□ 1.03
RELA-216ENST00000531238 THUMPD2Q9BTF0 503 aaKnown RBP21.51■■□□□ 1.03
RELA-216ENST00000531238 MIS18AQ9NYP9 233 aa21.51■■□□□ 1.03
RELA-216ENST00000531238 PPP1R1BQ9UD71 204 aaPredicted RBP21.51■■□□□ 1.03
RELA-216ENST00000531238 UBR3Q6ZT12 1888 aa21.51■■□□□ 1.03
RELA-216ENST00000531238 MYH14Q7Z406 1995 aaKnown RBP21.5■■□□□ 1.03
RELA-216ENST00000531238 NEFMP07197 916 aa21.5■■□□□ 1.03
RELA-216ENST00000531238 ARHGEF1Q92888 912 aaKnown RBP21.5■■□□□ 1.03
RELA-216ENST00000531238 SIPA1L3O60292 1781 aaPredicted RBP21.5■■□□□ 1.03
RELA-216ENST00000531238 TMPOP42166 694 aaKnown RBP21.49■■□□□ 1.03
RELA-216ENST00000531238 WDR43Q15061 677 aaKnown RBP eCLIP21.49■■□□□ 1.03
RELA-216ENST00000531238 VSIG10Q8N0Z9 540 aa21.49■■□□□ 1.03
RELA-216ENST00000531238 ARXQ96QS3 562 aa21.49■■□□□ 1.03
RELA-216ENST00000531238 RTCBQ9Y3I0 505 aaKnown RBP21.49■■□□□ 1.03
RELA-216ENST00000531238 MAPK8IP3Q9UPT6 1336 aa21.49■■□□□ 1.03
RELA-216ENST00000531238 COL5A3P25940 1745 aaPredicted RBP21.49■■□□□ 1.03
RELA-216ENST00000531238 TJP1Q07157 1748 aa21.49■■□□□ 1.03
RELA-216ENST00000531238 RIPK4P57078 832 aa21.48■■□□□ 1.03
RELA-216ENST00000531238 TAF7Q15545 349 aaPredicted RBP21.48■■□□□ 1.03
RELA-216ENST00000531238 TRAPPC3LQ5T215 181 aa21.48■■□□□ 1.03
RELA-216ENST00000531238 TTC5Q8N0Z6 440 aa21.48■■□□□ 1.03
RELA-216ENST00000531238 RRP7AQ9Y3A4 280 aaKnown RBP21.48■■□□□ 1.03
RELA-216ENST00000531238 RUNDC1Q96C34 613 aa21.47■■□□□ 1.03
RELA-216ENST00000531238 ANP32CO43423 234 aa21.46■■□□□ 1.03
RELA-216ENST00000531238 FHDC1Q9C0D6 1143 aaPredicted RBP21.46■■□□□ 1.03
RELA-216ENST00000531238 HEG1Q9ULI3 1381 aa21.46■■□□□ 1.03
RELA-216ENST00000531238 COL24A1Q17RW2 1714 aa21.46■■□□□ 1.03
RELA-216ENST00000531238 DLG5Q8TDM6 1919 aa21.45■■□□□ 1.02
RELA-216ENST00000531238 PRAMEF22A3QJZ6 481 aa21.45■■□□□ 1.02
RELA-216ENST00000531238 CCDC87Q9NVE4 849 aa21.45■■□□□ 1.02
RELA-216ENST00000531238 UBR2Q8IWV8 1755 aa21.45■■□□□ 1.02
RELA-216ENST00000531238 NEUROD2Q15784 382 aa21.44■■□□□ 1.02
RELA-216ENST00000531238 FMNL2Q96PY5 1086 aa21.44■■□□□ 1.02
RELA-216ENST00000531238 SYT17Q9BSW7 474 aa21.44■■□□□ 1.02
RELA-216ENST00000531238 TRIM35Q9UPQ4 493 aa21.44■■□□□ 1.02
RELA-216ENST00000531238 ZBTB1Q9Y2K1 713 aa21.44■■□□□ 1.02
RELA-216ENST00000531238 CICQ96RK0 1608 aaPredicted RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms