RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 UBR3Q6ZT12 1888 aa25.49■■□□□ 1.67
UBXN1-211ENST00000531056 HMGB2P26583 209 aaKnown RBP25.48■■□□□ 1.67
UBXN1-211ENST00000531056 RSPH6AQ9H0K4 717 aa25.48■■□□□ 1.67
UBXN1-211ENST00000531056 ATF5Q9Y2D1 282 aaPredicted RBP25.48■■□□□ 1.67
UBXN1-211ENST00000531056 COL5A3P25940 1745 aaPredicted RBP25.48■■□□□ 1.67
UBXN1-211ENST00000531056 SGIP1Q9BQI5 828 aa25.47■■□□□ 1.67
UBXN1-211ENST00000531056 NUDCQ9Y266 331 aa25.47■■□□□ 1.67
UBXN1-211ENST00000531056 CICQ96RK0 1608 aaPredicted RBP25.47■■□□□ 1.67
UBXN1-211ENST00000531056 LINC00116Q8NCU8 138 aa25.46■■□□□ 1.67
UBXN1-211ENST00000531056 LGR6Q9HBX8 967 aa25.46■■□□□ 1.67
UBXN1-211ENST00000531056 RNMTO43148 476 aaKnown RBP25.45■■□□□ 1.66
UBXN1-211ENST00000531056 ITPK1Q13572 414 aa25.45■■□□□ 1.66
UBXN1-211ENST00000531056 NFATC2IPQ8NCF5 419 aa25.45■■□□□ 1.66
UBXN1-211ENST00000531056 SLC16A10Q8TF71 515 aa25.45■■□□□ 1.66
UBXN1-211ENST00000531056 SLC4A9Q96Q91 983 aa25.44■■□□□ 1.66
UBXN1-211ENST00000531056 PPP1R1BQ9UD71 204 aaPredicted RBP25.44■■□□□ 1.66
UBXN1-211ENST00000531056 PRKAR2BP31323 418 aa25.43■■□□□ 1.66
UBXN1-211ENST00000531056 ATP6V1AP38606 617 aa25.43■■□□□ 1.66
UBXN1-211ENST00000531056 SLC52A2Q9HAB3 445 aa25.43■■□□□ 1.66
UBXN1-211ENST00000531056 TJP1Q07157 1748 aa25.43■■□□□ 1.66
UBXN1-211ENST00000531056 MAP3K5Q99683 1374 aa25.43■■□□□ 1.66
UBXN1-211ENST00000531056 SIPA1L3O60292 1781 aaPredicted RBP25.42■■□□□ 1.66
UBXN1-211ENST00000531056 U2AF1L5P0DN76 240 aaPredicted RBP25.42■■□□□ 1.66
UBXN1-211ENST00000531056 U2AF1Q01081 240 aaKnown RBP eCLIP25.42■■□□□ 1.66
UBXN1-211ENST00000531056 RALBP1Q15311 655 aa25.42■■□□□ 1.66
UBXN1-211ENST00000531056 COL23A1Q86Y22 540 aaPredicted RBP25.42■■□□□ 1.66
UBXN1-211ENST00000531056 GAS2L2Q8NHY3 880 aa25.42■■□□□ 1.66
UBXN1-211ENST00000531056 AMIGO3Q86WK7 504 aa25.41■■□□□ 1.66
UBXN1-211ENST00000531056 PHACTR3Q96KR7 559 aa25.41■■□□□ 1.66
UBXN1-211ENST00000531056 AK7Q96M32 723 aa25.41■■□□□ 1.66
UBXN1-211ENST00000531056 RBM42Q9BTD8 480 aaKnown RBP25.4■■□□□ 1.66
UBXN1-211ENST00000531056 UBR2Q8IWV8 1755 aa25.39■■□□□ 1.66
UBXN1-211ENST00000531056 FCHSD2O94868 740 aa25.39■■□□□ 1.66
UBXN1-211ENST00000531056 FLAD1Q8NFF5 587 aa25.38■■□□□ 1.65
UBXN1-211ENST00000531056 KCPQ6ZWJ8 1503 aa25.37■■□□□ 1.65
UBXN1-211ENST00000531056 GNAT3A8MTJ3 354 aa25.37■■□□□ 1.65
UBXN1-211ENST00000531056 CEMIPQ8WUJ3 1361 aa25.35■■□□□ 1.65
UBXN1-211ENST00000531056 MYH14Q7Z406 1995 aaKnown RBP25.35■■□□□ 1.65
UBXN1-211ENST00000531056 PTCD1O75127 700 aaKnown RBP25.35■■□□□ 1.65
UBXN1-211ENST00000531056 SSFA2P28290 1259 aa25.35■■□□□ 1.65
UBXN1-211ENST00000531056 IL17REQ8NFR9 667 aa25.35■■□□□ 1.65
UBXN1-211ENST00000531056 MSH5O43196 834 aa25.34■■□□□ 1.65
UBXN1-211ENST00000531056 SMIM5Q71RC9 77 aa25.34■■□□□ 1.65
UBXN1-211ENST00000531056 MYBBP1AQ9BQG0 1328 aaKnown RBP25.34■■□□□ 1.65
UBXN1-211ENST00000531056 CNTNAP4Q9C0A0 1308 aa25.34■■□□□ 1.65
UBXN1-211ENST00000531056 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.33■■□□□ 1.65
UBXN1-211ENST00000531056 GNPATO15228 680 aa25.33■■□□□ 1.65
UBXN1-211ENST00000531056 PHF14O94880 888 aa25.33■■□□□ 1.65
UBXN1-211ENST00000531056 ARXQ96QS3 562 aa25.33■■□□□ 1.65
UBXN1-211ENST00000531056 SLC39A6Q13433 755 aa25.32■■□□□ 1.64
UBXN1-211ENST00000531056 RC3H1Q5TC82 1133 aaKnown RBP25.32■■□□□ 1.64
UBXN1-211ENST00000531056 FHDC1Q9C0D6 1143 aaPredicted RBP25.31■■□□□ 1.64
UBXN1-211ENST00000531056 DLG5Q8TDM6 1919 aa25.31■■□□□ 1.64
UBXN1-211ENST00000531056 C4AP0C0L4 1744 aa25.31■■□□□ 1.64
UBXN1-211ENST00000531056 POLD1P28340 1107 aa25.3■■□□□ 1.64
UBXN1-211ENST00000531056 MSL1Q68DK7 614 aa25.29■■□□□ 1.64
UBXN1-211ENST00000531056 PLEKHF1Q96S99 279 aa25.29■■□□□ 1.64
UBXN1-211ENST00000531056 TEFQ10587 303 aa25.28■■□□□ 1.64
UBXN1-211ENST00000531056 SYT17Q9BSW7 474 aa25.27■■□□□ 1.64
UBXN1-211ENST00000531056 CRKLP46109 303 aaKnown RBP25.26■■□□□ 1.63
UBXN1-211ENST00000531056 PRKRIP1Q9H875 184 aaPredicted RBP25.26■■□□□ 1.63
UBXN1-211ENST00000531056 RTCBQ9Y3I0 505 aaKnown RBP25.26■■□□□ 1.63
UBXN1-211ENST00000531056 RPS6KA4O75676 772 aa25.25■■□□□ 1.63
UBXN1-211ENST00000531056 DNAJC10Q8IXB1 793 aa25.25■■□□□ 1.63
UBXN1-211ENST00000531056 ADRA2BP18089 450 aa25.24■■□□□ 1.63
UBXN1-211ENST00000531056 VSIG10Q8N0Z9 540 aa25.24■■□□□ 1.63
UBXN1-211ENST00000531056 HTATSF1O43719 755 aaKnown RBP25.23■■□□□ 1.63
UBXN1-211ENST00000531056 ZNF790Q6PG37 636 aa25.23■■□□□ 1.63
UBXN1-211ENST00000531056 TRAPPC3LQ5T215 181 aa25.22■■□□□ 1.63
UBXN1-211ENST00000531056 INTS5Q6P9B9 1019 aaKnown RBP25.22■■□□□ 1.63
UBXN1-211ENST00000531056 MCM10Q7L590 875 aa25.22■■□□□ 1.63
UBXN1-211ENST00000531056 TTC5Q8N0Z6 440 aa25.22■■□□□ 1.63
UBXN1-211ENST00000531056 RTF1Q92541 710 aaKnown RBP25.22■■□□□ 1.63
UBXN1-211ENST00000531056 ARHGEF1Q92888 912 aaKnown RBP25.21■■□□□ 1.63
UBXN1-211ENST00000531056 NEFMP07197 916 aa25.2■■□□□ 1.62
UBXN1-211ENST00000531056 CYP19A1P11511 503 aaPredicted RBP25.2■■□□□ 1.62
UBXN1-211ENST00000531056 DCTN1Q14203 1278 aa25.2■■□□□ 1.62
UBXN1-211ENST00000531056 PNNQ9H307 717 aaKnown RBP25.2■■□□□ 1.62
UBXN1-211ENST00000531056 HEG1Q9ULI3 1381 aa25.19■■□□□ 1.62
UBXN1-211ENST00000531056 ZNF316A6NFI3 1004 aaPredicted RBP25.19■■□□□ 1.62
UBXN1-211ENST00000531056 ZNF496Q96IT1 587 aaPredicted RBP25.19■■□□□ 1.62
UBXN1-211ENST00000531056 CCDC87Q9NVE4 849 aa25.19■■□□□ 1.62
UBXN1-211ENST00000531056 BTBD11A6QL63 1104 aa25.18■■□□□ 1.62
UBXN1-211ENST00000531056 NFE2L2Q16236 605 aa25.18■■□□□ 1.62
UBXN1-211ENST00000531056 MAPK8IP3Q9UPT6 1336 aa25.17■■□□□ 1.62
UBXN1-211ENST00000531056 SOS1Q07889 1333 aaPredicted RBP25.16■■□□□ 1.62
UBXN1-211ENST00000531056 KDM3BQ7LBC6 1761 aa25.16■■□□□ 1.62
UBXN1-211ENST00000531056 KCNQ3O43525 872 aa25.16■■□□□ 1.62
UBXN1-211ENST00000531056 KLHL34Q8N239 644 aa25.16■■□□□ 1.62
UBXN1-211ENST00000531056 RFC4P35249 363 aa25.15■■□□□ 1.62
UBXN1-211ENST00000531056 FMNL2Q96PY5 1086 aa25.15■■□□□ 1.62
UBXN1-211ENST00000531056 GYS1P13807 737 aa25.14■■□□□ 1.62
UBXN1-211ENST00000531056 NLGN2Q8NFZ4 835 aa25.14■■□□□ 1.62
UBXN1-211ENST00000531056 ZBTB1Q9Y2K1 713 aa25.14■■□□□ 1.62
UBXN1-211ENST00000531056 USP42Q9H9J4 1324 aaKnown RBP25.13■■□□□ 1.61
UBXN1-211ENST00000531056 COL15A1P39059 1388 aa25.12■■□□□ 1.61
UBXN1-211ENST00000531056 KIF13BQ9NQT8 1826 aa25.12■■□□□ 1.61
UBXN1-211ENST00000531056 NLGN1Q8N2Q7 840 aa25.11■■□□□ 1.61
UBXN1-211ENST00000531056 TEX13AQ9BXU3 409 aaPredicted RBP25.11■■□□□ 1.61
UBXN1-211ENST00000531056 SRP68Q9UHB9 627 aaKnown RBP25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms