RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 LOC102724428A0A0B4J2F2 783 aa25.03■■□□□ 1.6
GMDS-208ENST00000530927 SIK1P57059 783 aa25.03■■□□□ 1.6
GMDS-208ENST00000530927 SMIM5Q71RC9 77 aa25.03■■□□□ 1.6
GMDS-208ENST00000530927 SLC4A9Q96Q91 983 aa25.03■■□□□ 1.6
GMDS-208ENST00000530927 ITPK1Q13572 414 aa25.02■■□□□ 1.6
GMDS-208ENST00000530927 PRKRIP1Q9H875 184 aaPredicted RBP25.02■■□□□ 1.6
GMDS-208ENST00000530927 AMIGO3Q86WK7 504 aa25.01■■□□□ 1.59
GMDS-208ENST00000530927 LINC00116Q8NCU8 138 aa25.01■■□□□ 1.59
GMDS-208ENST00000530927 TFCP2L1Q9NZI6 479 aa25.01■■□□□ 1.59
GMDS-208ENST00000530927 MAP3K5Q99683 1374 aa25.01■■□□□ 1.59
GMDS-208ENST00000530927 C4BP0C0L5 1744 aa25■■□□□ 1.59
GMDS-208ENST00000530927 MRC1P22897 1456 aa25■■□□□ 1.59
GMDS-208ENST00000530927 PNPLA7Q6ZV29 1317 aa25■■□□□ 1.59
GMDS-208ENST00000530927 SLC52A2Q9HAB3 445 aa25■■□□□ 1.59
GMDS-208ENST00000530927 FCHSD2O94868 740 aa24.99■■□□□ 1.59
GMDS-208ENST00000530927 GAS2L2Q8NHY3 880 aa24.99■■□□□ 1.59
GMDS-208ENST00000530927 RBM42Q9BTD8 480 aaKnown RBP24.99■■□□□ 1.59
GMDS-208ENST00000530927 ATF5Q9Y2D1 282 aaPredicted RBP24.99■■□□□ 1.59
GMDS-208ENST00000530927 QSER1Q2KHR3 1735 aa24.98■■□□□ 1.59
GMDS-208ENST00000530927 ATP6V1AP38606 617 aa24.98■■□□□ 1.59
GMDS-208ENST00000530927 IL17REQ8NFR9 667 aa24.98■■□□□ 1.59
GMDS-208ENST00000530927 GNAT3A8MTJ3 354 aa24.97■■□□□ 1.59
GMDS-208ENST00000530927 PTCD1O75127 700 aaKnown RBP24.97■■□□□ 1.59
GMDS-208ENST00000530927 SLC39A6Q13433 755 aa24.97■■□□□ 1.59
GMDS-208ENST00000530927 SPON1Q9HCB6 807 aa24.95■■□□□ 1.59
GMDS-208ENST00000530927 PLEKHF1Q96S99 279 aa24.95■■□□□ 1.58
GMDS-208ENST00000530927 COL23A1Q86Y22 540 aaPredicted RBP24.94■■□□□ 1.58
GMDS-208ENST00000530927 DCTN1Q14203 1278 aa24.93■■□□□ 1.58
GMDS-208ENST00000530927 SIPA1L3O60292 1781 aaPredicted RBP24.92■■□□□ 1.58
GMDS-208ENST00000530927 UBR3Q6ZT12 1888 aa24.92■■□□□ 1.58
GMDS-208ENST00000530927 COL5A3P25940 1745 aaPredicted RBP24.92■■□□□ 1.58
GMDS-208ENST00000530927 TJP1Q07157 1748 aa24.92■■□□□ 1.58
GMDS-208ENST00000530927 PTGER2P43116 358 aa24.92■■□□□ 1.58
GMDS-208ENST00000530927 MCM10Q7L590 875 aa24.92■■□□□ 1.58
GMDS-208ENST00000530927 KCPQ6ZWJ8 1503 aa24.91■■□□□ 1.58
GMDS-208ENST00000530927 PHF14O94880 888 aa24.91■■□□□ 1.58
GMDS-208ENST00000530927 AK7Q96M32 723 aa24.91■■□□□ 1.58
GMDS-208ENST00000530927 MSH5O43196 834 aa24.9■■□□□ 1.58
GMDS-208ENST00000530927 MTFR1LQ9H019 292 aa24.9■■□□□ 1.58
GMDS-208ENST00000530927 ZNF831Q5JPB2 1677 aa24.9■■□□□ 1.58
GMDS-208ENST00000530927 CEMIPQ8WUJ3 1361 aa24.9■■□□□ 1.58
GMDS-208ENST00000530927 DLG5Q8TDM6 1919 aa24.9■■□□□ 1.58
GMDS-208ENST00000530927 CCDC184Q52MB2 194 aa24.88■■□□□ 1.57
GMDS-208ENST00000530927 GNPATO15228 680 aa24.87■■□□□ 1.57
GMDS-208ENST00000530927 TEFQ10587 303 aa24.87■■□□□ 1.57
GMDS-208ENST00000530927 CCDC146Q8IYE0 955 aa24.87■■□□□ 1.57
GMDS-208ENST00000530927 SGIP1Q9BQI5 828 aa24.87■■□□□ 1.57
GMDS-208ENST00000530927 UBR2Q8IWV8 1755 aa24.87■■□□□ 1.57
GMDS-208ENST00000530927 MSL1Q68DK7 614 aa24.86■■□□□ 1.57
GMDS-208ENST00000530927 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.86■■□□□ 1.57
GMDS-208ENST00000530927 KCNQ3O43525 872 aa24.86■■□□□ 1.57
GMDS-208ENST00000530927 PPP1R1BQ9UD71 204 aaPredicted RBP24.86■■□□□ 1.57
GMDS-208ENST00000530927 MYH14Q7Z406 1995 aaKnown RBP24.85■■□□□ 1.57
GMDS-208ENST00000530927 DNAJC10Q8IXB1 793 aa24.85■■□□□ 1.57
GMDS-208ENST00000530927 CICQ96RK0 1608 aaPredicted RBP24.83■■□□□ 1.57
GMDS-208ENST00000530927 MAPK8IP3Q9UPT6 1336 aa24.83■■□□□ 1.57
GMDS-208ENST00000530927 NFE2L2Q16236 605 aa24.83■■□□□ 1.57
GMDS-208ENST00000530927 RTF1Q92541 710 aaKnown RBP24.83■■□□□ 1.57
GMDS-208ENST00000530927 THUMPD2Q9BTF0 503 aaKnown RBP24.83■■□□□ 1.57
GMDS-208ENST00000530927 ADAMTS8Q9UP79 889 aa24.83■■□□□ 1.57
GMDS-208ENST00000530927 COL24A1Q17RW2 1714 aa24.82■■□□□ 1.56
GMDS-208ENST00000530927 NEFMP07197 916 aa24.81■■□□□ 1.56
GMDS-208ENST00000530927 CRKLP46109 303 aaKnown RBP24.81■■□□□ 1.56
GMDS-208ENST00000530927 WDR43Q15061 677 aaKnown RBP eCLIP24.81■■□□□ 1.56
GMDS-208ENST00000530927 SLC16A10Q8TF71 515 aa24.81■■□□□ 1.56
GMDS-208ENST00000530927 ZNF496Q96IT1 587 aaPredicted RBP24.81■■□□□ 1.56
GMDS-208ENST00000530927 CNTNAP4Q9C0A0 1308 aa24.8■■□□□ 1.56
GMDS-208ENST00000530927 ZNF790Q6PG37 636 aa24.8■■□□□ 1.56
GMDS-208ENST00000530927 RRP7AQ9Y3A4 280 aaKnown RBP24.8■■□□□ 1.56
GMDS-208ENST00000530927 BTBD11A6QL63 1104 aa24.79■■□□□ 1.56
GMDS-208ENST00000530927 SSFA2P28290 1259 aa24.79■■□□□ 1.56
GMDS-208ENST00000530927 TTC5Q8N0Z6 440 aa24.79■■□□□ 1.56
GMDS-208ENST00000530927 MIS18AQ9NYP9 233 aa24.79■■□□□ 1.56
GMDS-208ENST00000530927 INTS5Q6P9B9 1019 aaKnown RBP24.78■■□□□ 1.56
GMDS-208ENST00000530927 RC3H1Q5TC82 1133 aaKnown RBP24.78■■□□□ 1.56
GMDS-208ENST00000530927 PNNQ9H307 717 aaKnown RBP24.78■■□□□ 1.56
GMDS-208ENST00000530927 RTCBQ9Y3I0 505 aaKnown RBP24.78■■□□□ 1.56
GMDS-208ENST00000530927 HTATSF1O43719 755 aaKnown RBP24.77■■□□□ 1.56
GMDS-208ENST00000530927 CYP19A1P11511 503 aaPredicted RBP24.77■■□□□ 1.56
GMDS-208ENST00000530927 FLAD1Q8NFF5 587 aa24.77■■□□□ 1.56
GMDS-208ENST00000530927 ARXQ96QS3 562 aa24.77■■□□□ 1.56
GMDS-208ENST00000530927 C4AP0C0L4 1744 aa24.76■■□□□ 1.55
GMDS-208ENST00000530927 HEG1Q9ULI3 1381 aa24.75■■□□□ 1.55
GMDS-208ENST00000530927 RPS6KA4O75676 772 aa24.75■■□□□ 1.55
GMDS-208ENST00000530927 HMGB2P26583 209 aaKnown RBP24.75■■□□□ 1.55
GMDS-208ENST00000530927 TMPOP42166 694 aaKnown RBP24.75■■□□□ 1.55
GMDS-208ENST00000530927 RIPK4P57078 832 aa24.75■■□□□ 1.55
GMDS-208ENST00000530927 NEUROD2Q15784 382 aa24.75■■□□□ 1.55
GMDS-208ENST00000530927 ARHGEF1Q92888 912 aaKnown RBP24.75■■□□□ 1.55
GMDS-208ENST00000530927 FHDC1Q9C0D6 1143 aaPredicted RBP24.75■■□□□ 1.55
GMDS-208ENST00000530927 PRAMEF22A3QJZ6 481 aa24.74■■□□□ 1.55
GMDS-208ENST00000530927 ANP32CO43423 234 aa24.74■■□□□ 1.55
GMDS-208ENST00000530927 TRAPPC3LQ5T215 181 aa24.73■■□□□ 1.55
GMDS-208ENST00000530927 CCDC87Q9NVE4 849 aa24.73■■□□□ 1.55
GMDS-208ENST00000530927 ZBTB1Q9Y2K1 713 aa24.73■■□□□ 1.55
GMDS-208ENST00000530927 POLD1P28340 1107 aa24.72■■□□□ 1.55
GMDS-208ENST00000530927 VSIG10Q8N0Z9 540 aa24.72■■□□□ 1.55
GMDS-208ENST00000530927 KLHL34Q8N239 644 aa24.72■■□□□ 1.55
GMDS-208ENST00000530927 RUNDC1Q96C34 613 aa24.72■■□□□ 1.55
GMDS-208ENST00000530927 TAF7Q15545 349 aaPredicted RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms