RNA–Protein interactions for RNA: ENST00000530919.5

TRIM29-216, Transcript of tripartite motif containing 29, humanhuman

TSL 3

Gene TRIM29, Length 1,227 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-216ENST00000530919 SIK1P57059 783 aa18.85■□□□□ 0.61
TRIM29-216ENST00000530919 U2SURPO15042 1029 aaKnown RBP18.84■□□□□ 0.61
TRIM29-216ENST00000530919 PELP1Q8IZL8 1130 aaKnown RBP18.84■□□□□ 0.61
TRIM29-216ENST00000530919 CFAP53Q96M91 514 aa18.84■□□□□ 0.61
TRIM29-216ENST00000530919 ASAP1Q9ULH1 1129 aa18.84■□□□□ 0.61
TRIM29-216ENST00000530919 CABP4P57796 275 aa18.83■□□□□ 0.6
TRIM29-216ENST00000530919 GPR162Q16538 588 aa18.83■□□□□ 0.6
TRIM29-216ENST00000530919 COL24A1Q17RW2 1714 aa18.83■□□□□ 0.6
TRIM29-216ENST00000530919 PPP2R1AP30153 589 aa18.82■□□□□ 0.6
TRIM29-216ENST00000530919 ATP6V1AP38606 617 aa18.82■□□□□ 0.6
TRIM29-216ENST00000530919 RBM42Q9BTD8 480 aaKnown RBP18.81■□□□□ 0.6
TRIM29-216ENST00000530919 ATG3Q9NT62 314 aa18.81■□□□□ 0.6
TRIM29-216ENST00000530919 COL3A1P02461 1466 aaPredicted RBP18.81■□□□□ 0.6
TRIM29-216ENST00000530919 KDM6AO15550 1401 aaPredicted RBP18.81■□□□□ 0.6
TRIM29-216ENST00000530919 AKAP4Q5JQC9 854 aa18.8■□□□□ 0.6
TRIM29-216ENST00000530919 UBR3Q6ZT12 1888 aa18.8■□□□□ 0.6
TRIM29-216ENST00000530919 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.79■□□□□ 0.6
TRIM29-216ENST00000530919 GNPATO15228 680 aa18.79■□□□□ 0.6
TRIM29-216ENST00000530919 LINC00116Q8NCU8 138 aa18.79■□□□□ 0.6
TRIM29-216ENST00000530919 SSFA2P28290 1259 aa18.78■□□□□ 0.6
TRIM29-216ENST00000530919 NUDCQ9Y266 331 aa18.78■□□□□ 0.6
TRIM29-216ENST00000530919 MTHFSDQ2M296 383 aaKnown RBP18.77■□□□□ 0.6
TRIM29-216ENST00000530919 NFATC2IPQ8NCF5 419 aa18.77■□□□□ 0.6
TRIM29-216ENST00000530919 ITPK1Q13572 414 aa18.76■□□□□ 0.59
TRIM29-216ENST00000530919 NLGN2Q8NFZ4 835 aa18.76■□□□□ 0.59
TRIM29-216ENST00000530919 UTRNP46939 3433 aa18.76■□□□□ 0.59
TRIM29-216ENST00000530919 CHD4Q14839 1912 aa18.75■□□□□ 0.59
TRIM29-216ENST00000530919 RNMTO43148 476 aaKnown RBP18.74■□□□□ 0.59
TRIM29-216ENST00000530919 DDX10Q13206 875 aaKnown RBP18.74■□□□□ 0.59
TRIM29-216ENST00000530919 SMIM5Q71RC9 77 aa18.74■□□□□ 0.59
TRIM29-216ENST00000530919 LGR6Q9HBX8 967 aa18.74■□□□□ 0.59
TRIM29-216ENST00000530919 PTCD1O75127 700 aaKnown RBP18.73■□□□□ 0.59
TRIM29-216ENST00000530919 U2AF1L5P0DN76 240 aaPredicted RBP18.73■□□□□ 0.59
TRIM29-216ENST00000530919 U2AF1Q01081 240 aaKnown RBP eCLIP18.73■□□□□ 0.59
TRIM29-216ENST00000530919 AMIGO3Q86WK7 504 aa18.73■□□□□ 0.59
TRIM29-216ENST00000530919 GAS2L2Q8NHY3 880 aa18.73■□□□□ 0.59
TRIM29-216ENST00000530919 SLC52A2Q9HAB3 445 aa18.73■□□□□ 0.59
TRIM29-216ENST00000530919 RTCBQ9Y3I0 505 aaKnown RBP18.73■□□□□ 0.59
TRIM29-216ENST00000530919 ZNF831Q5JPB2 1677 aa18.73■□□□□ 0.59
TRIM29-216ENST00000530919 PRKAR2BP31323 418 aa18.72■□□□□ 0.59
TRIM29-216ENST00000530919 SCN11AQ9UI33 1791 aa18.71■□□□□ 0.59
TRIM29-216ENST00000530919 ZEB1P37275 1124 aaPredicted RBP18.71■□□□□ 0.59
TRIM29-216ENST00000530919 SLC4A9Q96Q91 983 aa18.71■□□□□ 0.59
TRIM29-216ENST00000530919 RSPH6AQ9H0K4 717 aa18.71■□□□□ 0.59
TRIM29-216ENST00000530919 CD2APQ9Y5K6 639 aa18.71■□□□□ 0.59
TRIM29-216ENST00000530919 COL5A3P25940 1745 aaPredicted RBP18.7■□□□□ 0.58
TRIM29-216ENST00000530919 TRAPPC3LQ5T215 181 aa18.7■□□□□ 0.58
TRIM29-216ENST00000530919 GOLGB1Q14789 3259 aaKnown RBP18.7■□□□□ 0.58
TRIM29-216ENST00000530919 GNAT3A8MTJ3 354 aa18.69■□□□□ 0.58
TRIM29-216ENST00000530919 CNTNAP4Q9C0A0 1308 aa18.69■□□□□ 0.58
TRIM29-216ENST00000530919 GRIN3BO60391 1043 aa18.68■□□□□ 0.58
TRIM29-216ENST00000530919 FCHSD2O94868 740 aa18.68■□□□□ 0.58
TRIM29-216ENST00000530919 RFC4P35249 363 aa18.68■□□□□ 0.58
TRIM29-216ENST00000530919 RALBP1Q15311 655 aa18.68■□□□□ 0.58
TRIM29-216ENST00000530919 PHACTR3Q96KR7 559 aa18.68■□□□□ 0.58
TRIM29-216ENST00000530919 ADRA2BP18089 450 aa18.67■□□□□ 0.58
TRIM29-216ENST00000530919 RC3H1Q5TC82 1133 aaKnown RBP18.67■□□□□ 0.58
TRIM29-216ENST00000530919 ZNF784Q8NCA9 323 aaPredicted RBP18.67■□□□□ 0.58
TRIM29-216ENST00000530919 MMP10P09238 476 aa18.66■□□□□ 0.58
TRIM29-216ENST00000530919 SLC39A6Q13433 755 aa18.66■□□□□ 0.58
TRIM29-216ENST00000530919 MRC1P22897 1456 aa18.65■□□□□ 0.58
TRIM29-216ENST00000530919 VIRMAQ69YN4 1812 aaKnown RBP18.65■□□□□ 0.58
TRIM29-216ENST00000530919 YBX3P16989 372 aaKnown RBP eCLIP18.65■□□□□ 0.58
TRIM29-216ENST00000530919 CRKLP46109 303 aaKnown RBP18.65■□□□□ 0.58
TRIM29-216ENST00000530919 TEFQ10587 303 aa18.65■□□□□ 0.58
TRIM29-216ENST00000530919 IL17REQ8NFR9 667 aa18.65■□□□□ 0.58
TRIM29-216ENST00000530919 RPS6KA4O75676 772 aa18.64■□□□□ 0.57
TRIM29-216ENST00000530919 NLGN1Q8N2Q7 840 aa18.64■□□□□ 0.57
TRIM29-216ENST00000530919 TJP1Q07157 1748 aa18.63■□□□□ 0.57
TRIM29-216ENST00000530919 NEFMP07197 916 aa18.63■□□□□ 0.57
TRIM29-216ENST00000530919 TTC5Q8N0Z6 440 aa18.63■□□□□ 0.57
TRIM29-216ENST00000530919 ARHGEF1Q92888 912 aaKnown RBP18.63■□□□□ 0.57
TRIM29-216ENST00000530919 WWC3Q9ULE0 1092 aa18.63■□□□□ 0.57
TRIM29-216ENST00000530919 CICQ96RK0 1608 aaPredicted RBP18.63■□□□□ 0.57
TRIM29-216ENST00000530919 ADAMTS7Q9UKP4 1686 aa18.63■□□□□ 0.57
TRIM29-216ENST00000530919 C4AP0C0L4 1744 aa18.63■□□□□ 0.57
TRIM29-216ENST00000530919 DNAJC10Q8IXB1 793 aa18.61■□□□□ 0.57
TRIM29-216ENST00000530919 RTF1Q92541 710 aaKnown RBP18.61■□□□□ 0.57
TRIM29-216ENST00000530919 PARP3Q9Y6F1 533 aa18.6■□□□□ 0.57
TRIM29-216ENST00000530919 MYH14Q7Z406 1995 aaKnown RBP18.6■□□□□ 0.57
TRIM29-216ENST00000530919 GYS1P13807 737 aa18.59■□□□□ 0.57
TRIM29-216ENST00000530919 CCDC87Q9NVE4 849 aa18.59■□□□□ 0.57
TRIM29-216ENST00000530919 CEMIPQ8WUJ3 1361 aa18.58■□□□□ 0.57
TRIM29-216ENST00000530919 MYBBP1AQ9BQG0 1328 aaKnown RBP18.58■□□□□ 0.57
TRIM29-216ENST00000530919 VSIG10Q8N0Z9 540 aa18.58■□□□□ 0.56
TRIM29-216ENST00000530919 PNNQ9H307 717 aaKnown RBP18.58■□□□□ 0.56
TRIM29-216ENST00000530919 ZPR1O75312 459 aa18.57■□□□□ 0.56
TRIM29-216ENST00000530919 INTS5Q6P9B9 1019 aaKnown RBP18.57■□□□□ 0.56
TRIM29-216ENST00000530919 ZNF790Q6PG37 636 aa18.57■□□□□ 0.56
TRIM29-216ENST00000530919 MCM10Q7L590 875 aa18.57■□□□□ 0.56
TRIM29-216ENST00000530919 KCPQ6ZWJ8 1503 aa18.57■□□□□ 0.56
TRIM29-216ENST00000530919 USP42Q9H9J4 1324 aaKnown RBP18.56■□□□□ 0.56
TRIM29-216ENST00000530919 BTBD11A6QL63 1104 aa18.56■□□□□ 0.56
TRIM29-216ENST00000530919 HTATSF1O43719 755 aaKnown RBP18.56■□□□□ 0.56
TRIM29-216ENST00000530919 CYP19A1P11511 503 aaPredicted RBP18.56■□□□□ 0.56
TRIM29-216ENST00000530919 SRP68Q9UHB9 627 aaKnown RBP18.56■□□□□ 0.56
TRIM29-216ENST00000530919 MAPK8IP3Q9UPT6 1336 aa18.55■□□□□ 0.56
TRIM29-216ENST00000530919 DCTN1Q14203 1278 aa18.55■□□□□ 0.56
TRIM29-216ENST00000530919 ZNF496Q96IT1 587 aaPredicted RBP18.55■□□□□ 0.56
TRIM29-216ENST00000530919 C10orf71Q711Q0 1435 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms