RNA–Protein interactions for RNA: ENST00000530809.2

VPS11-204, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-204ENST00000530809 CENPBP07199 599 aaPredicted RBP7.48□□□□□ -1.21
VPS11-204ENST00000530809 TGFB2P61812 414 aa7.48□□□□□ -1.21
VPS11-204ENST00000530809 FSTL1Q12841 308 aa7.48□□□□□ -1.21
VPS11-204ENST00000530809 C10orf71Q711Q0 1435 aa7.48□□□□□ -1.21
VPS11-204ENST00000530809 C16orf71Q8IYS4 520 aaPredicted RBP7.48□□□□□ -1.21
VPS11-204ENST00000530809 JMYQ8N9B5 988 aa7.48□□□□□ -1.21
VPS11-204ENST00000530809 KLRG1Q96E93 195 aa7.48□□□□□ -1.21
VPS11-204ENST00000530809 ZNF219Q9P2Y4 722 aaPredicted RBP7.48□□□□□ -1.21
VPS11-204ENST00000530809 PHF14O94880 888 aa7.47□□□□□ -1.21
VPS11-204ENST00000530809 NBPF6Q5VWK0 638 aa7.47□□□□□ -1.21
VPS11-204ENST00000530809 MPRIPQ6WCQ1 1025 aa7.47□□□□□ -1.21
VPS11-204ENST00000530809 POTEDQ86YR6 584 aa7.47□□□□□ -1.21
VPS11-204ENST00000530809 NBPF4Q96M43 638 aa7.47□□□□□ -1.21
VPS11-204ENST00000530809 INSRP06213 1382 aa7.46□□□□□ -1.21
VPS11-204ENST00000530809 CARD11Q9BXL7 1154 aa7.46□□□□□ -1.22
VPS11-204ENST00000530809 WWC3Q9ULE0 1092 aa7.46□□□□□ -1.22
VPS11-204ENST00000530809 BCS1LQ9Y276 419 aa7.46□□□□□ -1.22
VPS11-204ENST00000530809 CCDC88AQ3V6T2 1871 aa7.46□□□□□ -1.22
VPS11-204ENST00000530809 KDM2BQ8NHM5 1336 aa7.46□□□□□ -1.22
VPS11-204ENST00000530809 FLT4P35916 1363 aa7.46□□□□□ -1.22
VPS11-204ENST00000530809 NCAPD2Q15021 1401 aa7.45□□□□□ -1.22
VPS11-204ENST00000530809 LOC102724428A0A0B4J2F2 783 aa7.45□□□□□ -1.22
VPS11-204ENST00000530809 PRELPP51888 382 aa7.45□□□□□ -1.22
VPS11-204ENST00000530809 SIK1P57059 783 aa7.45□□□□□ -1.22
VPS11-204ENST00000530809 COL13A1Q5TAT6 717 aaPredicted RBP7.45□□□□□ -1.22
VPS11-204ENST00000530809 TNS4Q8IZW8 715 aa7.45□□□□□ -1.22
VPS11-204ENST00000530809 NMRK2Q9NPI5 230 aa7.45□□□□□ -1.22
VPS11-204ENST00000530809 DLEC1Q9Y238 1755 aa7.45□□□□□ -1.22
VPS11-204ENST00000530809 TIAM2Q8IVF5 1701 aa7.44□□□□□ -1.22
VPS11-204ENST00000530809 GNPATO15228 680 aa7.44□□□□□ -1.22
VPS11-204ENST00000530809 CYP27B1O15528 508 aa7.44□□□□□ -1.22
VPS11-204ENST00000530809 MMP10P09238 476 aa7.44□□□□□ -1.22
VPS11-204ENST00000530809 NKX1-1Q15270 411 aaPredicted RBP7.44□□□□□ -1.22
VPS11-204ENST00000530809 ARHGAP27Q6ZUM4 889 aa7.44□□□□□ -1.22
VPS11-204ENST00000530809 AMIGO3Q86WK7 504 aa7.44□□□□□ -1.22
VPS11-204ENST00000530809 NLGN1Q8N2Q7 840 aa7.44□□□□□ -1.22
VPS11-204ENST00000530809 USHBP1Q8N6Y0 703 aa7.44□□□□□ -1.22
VPS11-204ENST00000530809 RNF39Q9H2S5 420 aa7.44□□□□□ -1.22
VPS11-204ENST00000530809 CCDC87Q9NVE4 849 aa7.44□□□□□ -1.22
VPS11-204ENST00000530809 SPG7Q9UQ90 795 aa7.44□□□□□ -1.22
VPS11-204ENST00000530809 KCPQ6ZWJ8 1503 aa7.43□□□□□ -1.22
VPS11-204ENST00000530809 MYH14Q7Z406 1995 aaKnown RBP7.43□□□□□ -1.22
VPS11-204ENST00000530809 FCHSD2O94868 740 aa7.43□□□□□ -1.22
VPS11-204ENST00000530809 RRS1Q15050 365 aaKnown RBP7.43□□□□□ -1.22
VPS11-204ENST00000530809 LINC00116Q8NCU8 138 aa7.43□□□□□ -1.22
VPS11-204ENST00000530809 SMC1BQ8NDV3 1235 aa7.43□□□□□ -1.22
VPS11-204ENST00000530809 PIGBQ92521 554 aa7.43□□□□□ -1.22
VPS11-204ENST00000530809 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.43□□□□□ -1.22
VPS11-204ENST00000530809 TMOD3Q9NYL9 352 aa7.43□□□□□ -1.22
VPS11-204ENST00000530809 RTCBQ9Y3I0 505 aaKnown RBP7.43□□□□□ -1.22
VPS11-204ENST00000530809 ZC3H4Q9UPT8 1303 aaKnown RBP7.43□□□□□ -1.22
VPS11-204ENST00000530809 DICER1Q9UPY3 1922 aaKnown RBP7.42□□□□□ -1.22
VPS11-204ENST00000530809 A0A0G2JLW4 131 aa7.42□□□□□ -1.22
VPS11-204ENST00000530809 CAPN15O75808 1086 aa7.42□□□□□ -1.22
VPS11-204ENST00000530809 FBLN1P23142 703 aa7.42□□□□□ -1.22
VPS11-204ENST00000530809 ATP6V1AP38606 617 aa7.42□□□□□ -1.22
VPS11-204ENST00000530809 TMF1P82094 1093 aa7.42□□□□□ -1.22
VPS11-204ENST00000530809 TRAPPC3LQ5T215 181 aa7.42□□□□□ -1.22
VPS11-204ENST00000530809 C9orf131Q5VYM1 1079 aa7.42□□□□□ -1.22
VPS11-204ENST00000530809 SIN3AQ96ST3 1273 aa7.42□□□□□ -1.22
VPS11-204ENST00000530809 PARP3Q9Y6F1 533 aa7.42□□□□□ -1.22
VPS11-204ENST00000530809 KDRP35968 1356 aa7.42□□□□□ -1.22
VPS11-204ENST00000530809 AFDNP55196 1824 aaKnown RBP7.41□□□□□ -1.22
VPS11-204ENST00000530809 FYB1O15117 783 aa7.41□□□□□ -1.22
VPS11-204ENST00000530809 DPEP1P16444 411 aa7.41□□□□□ -1.22
VPS11-204ENST00000530809 NEUROD1Q13562 356 aa7.41□□□□□ -1.22
VPS11-204ENST00000530809 HSP90AB2PQ58FF8 381 aa7.41□□□□□ -1.22
VPS11-204ENST00000530809 RC3H1Q5TC82 1133 aaKnown RBP7.41□□□□□ -1.22
VPS11-204ENST00000530809 PIM2Q9P1W9 311 aa7.41□□□□□ -1.22
VPS11-204ENST00000530809 VIRMAQ69YN4 1812 aaKnown RBP7.41□□□□□ -1.22
VPS11-204ENST00000530809 RFC4P35249 363 aa7.4□□□□□ -1.22
VPS11-204ENST00000530809 ITPK1Q13572 414 aa7.4□□□□□ -1.22
VPS11-204ENST00000530809 SMIM5Q71RC9 77 aa7.4□□□□□ -1.22
VPS11-204ENST00000530809 IFNL2Q8IZJ0 200 aa7.4□□□□□ -1.22
VPS11-204ENST00000530809 DCAF5Q96JK2 942 aa7.4□□□□□ -1.22
VPS11-204ENST00000530809 TESK2Q96S53 571 aa7.4□□□□□ -1.22
VPS11-204ENST00000530809 GGNBP2Q9H3C7 697 aa7.4□□□□□ -1.22
VPS11-204ENST00000530809 RNF181Q9P0P0 153 aa7.4□□□□□ -1.22
VPS11-204ENST00000530809 ASAP1Q9ULH1 1129 aa7.4□□□□□ -1.22
VPS11-204ENST00000530809 CNTNAP4Q9C0A0 1308 aa7.4□□□□□ -1.22
VPS11-204ENST00000530809 TJP1Q07157 1748 aa7.4□□□□□ -1.23
VPS11-204ENST00000530809 NRXN2Q9P2S2 1712 aa7.4□□□□□ -1.23
VPS11-204ENST00000530809 ADAMTS7Q9UKP4 1686 aa7.39□□□□□ -1.23
VPS11-204ENST00000530809 RPS6KA4O75676 772 aa7.39□□□□□ -1.23
VPS11-204ENST00000530809 HSPA1AP0DMV8 641 aaKnown RBP7.39□□□□□ -1.23
VPS11-204ENST00000530809 HSPA1BP0DMV9 641 aaKnown RBP7.39□□□□□ -1.23
VPS11-204ENST00000530809 GYS1P13807 737 aa7.39□□□□□ -1.23
VPS11-204ENST00000530809 HTRA3P83110 453 aa7.39□□□□□ -1.23
VPS11-204ENST00000530809 C1QBPQ07021 282 aaKnown RBP7.39□□□□□ -1.23
VPS11-204ENST00000530809 DALRD3Q5D0E6 543 aaKnown RBP7.39□□□□□ -1.23
VPS11-204ENST00000530809 RRAGCQ9HB90 399 aa7.39□□□□□ -1.23
VPS11-204ENST00000530809 SPINK5Q9NQ38 1064 aaPredicted RBP7.39□□□□□ -1.23
VPS11-204ENST00000530809 SCN11AQ9UI33 1791 aa7.38□□□□□ -1.23
VPS11-204ENST00000530809 KDM6AO15550 1401 aaPredicted RBP7.38□□□□□ -1.23
VPS11-204ENST00000530809 VEGFAP15692 232 aaPredicted RBP7.38□□□□□ -1.23
VPS11-204ENST00000530809 PHKG2P15735 406 aa7.38□□□□□ -1.23
VPS11-204ENST00000530809 KCNA3P22001 575 aa7.38□□□□□ -1.23
VPS11-204ENST00000530809 ARHGEF1Q92888 912 aaKnown RBP7.38□□□□□ -1.23
VPS11-204ENST00000530809 ATG3Q9NT62 314 aa7.38□□□□□ -1.23
VPS11-204ENST00000530809 FER1L6Q2WGJ9 1857 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms