RNA–Protein interactions for RNA: ENST00000530720.1

CTNND1-226, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 832 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-226ENST00000530720 EYA1Q99502 592 aa6.77□□□□□ -1.33
CTNND1-226ENST00000530720 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.77□□□□□ -1.33
CTNND1-226ENST00000530720 MLLT3P42568 568 aaPredicted RBP6.76□□□□□ -1.33
CTNND1-226ENST00000530720 CFAP70Q5T0N1 1121 aa6.76□□□□□ -1.33
CTNND1-226ENST00000530720 V9GY48 417 aaPredicted RBP6.76□□□□□ -1.33
CTNND1-226ENST00000530720 SBNO1A3KN83 1393 aa6.75□□□□□ -1.33
CTNND1-226ENST00000530720 KRT28Q7Z3Y7 464 aa6.75□□□□□ -1.33
CTNND1-226ENST00000530720 UNC5CLQ8IV45 518 aa6.75□□□□□ -1.33
CTNND1-226ENST00000530720 NKX2-3Q8TAU0 364 aa6.75□□□□□ -1.33
CTNND1-226ENST00000530720 CABLES1Q8TDN4 633 aa6.75□□□□□ -1.33
CTNND1-226ENST00000530720 ARHGEF28Q8N1W1 1705 aaKnown RBP6.75□□□□□ -1.33
CTNND1-226ENST00000530720 BLMP54132 1417 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-226ENST00000530720 ANKARQ7Z5J8 1434 aa6.75□□□□□ -1.33
CTNND1-226ENST00000530720 PRR36Q9H6K5 1346 aa6.75□□□□□ -1.33
CTNND1-226ENST00000530720 RAB3GAP2Q9H2M9 1393 aa6.74□□□□□ -1.33
CTNND1-226ENST00000530720 SLC4A3P48751 1232 aa6.74□□□□□ -1.33
CTNND1-226ENST00000530720 COPS2P61201 443 aa6.74□□□□□ -1.33
CTNND1-226ENST00000530720 PRAM1Q96QH2 718 aa6.74□□□□□ -1.33
CTNND1-226ENST00000530720 TSHZ2Q9NRE2 1034 aa6.74□□□□□ -1.33
CTNND1-226ENST00000530720 TULP4Q9NRJ4 1543 aa6.74□□□□□ -1.33
CTNND1-226ENST00000530720 THSD7AQ9UPZ6 1657 aa6.74□□□□□ -1.33
CTNND1-226ENST00000530720 DHX57Q6P158 1386 aaKnown RBP6.73□□□□□ -1.33
CTNND1-226ENST00000530720 COL14A1Q05707 1796 aaKnown RBP6.73□□□□□ -1.33
CTNND1-226ENST00000530720 NRG2O14511 850 aaPredicted RBP6.73□□□□□ -1.33
CTNND1-226ENST00000530720 LCE2BO14633 110 aa6.73□□□□□ -1.33
CTNND1-226ENST00000530720 PTGDRQ13258 359 aa6.73□□□□□ -1.33
CTNND1-226ENST00000530720 VPS72Q15906 364 aa6.73□□□□□ -1.33
CTNND1-226ENST00000530720 TRAF7Q6Q0C0 670 aa6.73□□□□□ -1.33
CTNND1-226ENST00000530720 CCDC125Q86Z20 511 aa6.73□□□□□ -1.33
CTNND1-226ENST00000530720 KCNV2Q8TDN2 545 aa6.73□□□□□ -1.33
CTNND1-226ENST00000530720 TOPAZ1Q8N9V7 1692 aa6.73□□□□□ -1.33
CTNND1-226ENST00000530720 ATP7BP35670 1465 aa6.73□□□□□ -1.33
CTNND1-226ENST00000530720 LRP5O75197 1615 aa6.72□□□□□ -1.33
CTNND1-226ENST00000530720 PHRF1Q9P1Y6 1649 aaKnown RBP6.72□□□□□ -1.33
CTNND1-226ENST00000530720 FAM83GA6ND36 823 aa6.72□□□□□ -1.33
CTNND1-226ENST00000530720 ZPR1O75312 459 aa6.72□□□□□ -1.33
CTNND1-226ENST00000530720 GGCXP38435 758 aa6.72□□□□□ -1.33
CTNND1-226ENST00000530720 SAFB2Q14151 953 aaKnown RBP eCLIP6.72□□□□□ -1.33
CTNND1-226ENST00000530720 PRR14Q9BWN1 585 aa6.72□□□□□ -1.33
CTNND1-226ENST00000530720 TNS1Q9HBL0 1735 aaKnown RBP6.72□□□□□ -1.33
CTNND1-226ENST00000530720 ARHGEF10O15013 1369 aa6.71□□□□□ -1.33
CTNND1-226ENST00000530720 DNAJB2P25686 324 aa6.71□□□□□ -1.34
CTNND1-226ENST00000530720 DEFB132Q7Z7B7 95 aa6.71□□□□□ -1.34
CTNND1-226ENST00000530720 SEPT12Q8IYM1 358 aa6.71□□□□□ -1.34
CTNND1-226ENST00000530720 PMFBP1Q8TBY8 1022 aa6.71□□□□□ -1.34
CTNND1-226ENST00000530720 TMUB1Q9BVT8 246 aa6.71□□□□□ -1.34
CTNND1-226ENST00000530720 ITSN1Q15811 1721 aa6.7□□□□□ -1.34
CTNND1-226ENST00000530720 RBM46Q8TBY0 533 aaKnown RBP6.7□□□□□ -1.34
CTNND1-226ENST00000530720 HIRIP3Q9BW71 556 aaPredicted RBP6.7□□□□□ -1.34
CTNND1-226ENST00000530720 PCDHB3Q9Y5E6 796 aa6.7□□□□□ -1.34
CTNND1-226ENST00000530720 ACIN1Q9UKV3 1341 aaKnown RBP6.7□□□□□ -1.34
CTNND1-226ENST00000530720 RGPD1P0DJD0 1748 aa6.7□□□□□ -1.34
CTNND1-226ENST00000530720 NRKQ7Z2Y5 1582 aa6.69□□□□□ -1.34
CTNND1-226ENST00000530720 LMO7Q8WWI1 1683 aa6.69□□□□□ -1.34
CTNND1-226ENST00000530720 PSME1Q06323 249 aa6.69□□□□□ -1.34
CTNND1-226ENST00000530720 TMEM134Q9H6X4 195 aa6.69□□□□□ -1.34
CTNND1-226ENST00000530720 TRAK1Q9UPV9 953 aa6.69□□□□□ -1.34
CTNND1-226ENST00000530720 ADGRG1Q9Y653 693 aa6.69□□□□□ -1.34
CTNND1-226ENST00000530720 KIAA1210Q9ULL0 1709 aa6.69□□□□□ -1.34
CTNND1-226ENST00000530720 MINK1Q8N4C8 1332 aaPredicted RBP6.69□□□□□ -1.34
CTNND1-226ENST00000530720 WASLO00401 505 aaPredicted RBP6.68□□□□□ -1.34
CTNND1-226ENST00000530720 BLOC1S3Q6QNY0 202 aa6.68□□□□□ -1.34
CTNND1-226ENST00000530720 KRT27Q7Z3Y8 459 aa6.68□□□□□ -1.34
CTNND1-226ENST00000530720 BTG4Q9NY30 223 aa6.68□□□□□ -1.34
CTNND1-226ENST00000530720 SPATA31A5Q5VU36 1347 aa6.68□□□□□ -1.34
CTNND1-226ENST00000530720 SPATA31A7Q8IWB4 1347 aa6.68□□□□□ -1.34
CTNND1-226ENST00000530720 DISP2A7MBM2 1401 aa6.67□□□□□ -1.34
CTNND1-226ENST00000530720 LMOD2Q6P5Q4 547 aa6.67□□□□□ -1.34
CTNND1-226ENST00000530720 POGKQ9P215 609 aa6.67□□□□□ -1.34
CTNND1-226ENST00000530720 PDZRN3Q9UPQ7 1066 aa6.67□□□□□ -1.34
CTNND1-226ENST00000530720 POLR3AO14802 1390 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-226ENST00000530720 EIF3AQ14152 1382 aaKnown RBP6.67□□□□□ -1.34
CTNND1-226ENST00000530720 RREB1Q92766 1687 aa6.66□□□□□ -1.34
CTNND1-226ENST00000530720 CAMTA1Q9Y6Y1 1673 aa6.66□□□□□ -1.34
CTNND1-226ENST00000530720 RCCD1A6NED2 376 aa6.66□□□□□ -1.34
CTNND1-226ENST00000530720 HAP1P54257 671 aaPredicted RBP6.66□□□□□ -1.34
CTNND1-226ENST00000530720 FAM182BQ5T319 152 aa6.66□□□□□ -1.34
CTNND1-226ENST00000530720 DCAF11Q8TEB1 546 aa6.66□□□□□ -1.34
CTNND1-226ENST00000530720 GPRASP1Q5JY77 1395 aa6.66□□□□□ -1.34
CTNND1-226ENST00000530720 KIAA0232Q92628 1395 aa6.66□□□□□ -1.34
CTNND1-226ENST00000530720 NUP188Q5SRE5 1749 aa6.65□□□□□ -1.34
CTNND1-226ENST00000530720 RNF223E7ERA6 249 aa6.65□□□□□ -1.34
CTNND1-226ENST00000530720 ACTN4O43707 911 aaKnown RBP6.65□□□□□ -1.34
CTNND1-226ENST00000530720 FAM161AQ3B820 660 aa6.65□□□□□ -1.34
CTNND1-226ENST00000530720 KMT5BQ4FZB7 885 aa6.65□□□□□ -1.34
CTNND1-226ENST00000530720 NUDT16Q96DE0 195 aaKnown RBP6.65□□□□□ -1.34
CTNND1-226ENST00000530720 KDM2AQ9Y2K7 1162 aa6.65□□□□□ -1.34
CTNND1-226ENST00000530720 CCDC9Q9Y3X0 531 aaKnown RBP6.65□□□□□ -1.34
CTNND1-226ENST00000530720 SPATA31A1Q5TZJ5 1347 aa6.65□□□□□ -1.35
CTNND1-226ENST00000530720 PEAK1Q9H792 1746 aa6.64□□□□□ -1.35
CTNND1-226ENST00000530720 FCHSD2O94868 740 aa6.64□□□□□ -1.35
CTNND1-226ENST00000530720 HRCP23327 699 aa6.64□□□□□ -1.35
CTNND1-226ENST00000530720 USP19O94966 1318 aa6.64□□□□□ -1.35
CTNND1-226ENST00000530720 SSH2Q76I76 1423 aa6.64□□□□□ -1.35
CTNND1-226ENST00000530720 QRICH2Q9H0J4 1663 aa6.64□□□□□ -1.35
CTNND1-226ENST00000530720 PARP4Q9UKK3 1724 aaKnown RBP6.64□□□□□ -1.35
CTNND1-226ENST00000530720 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.63□□□□□ -1.35
CTNND1-226ENST00000530720 PLEKHG3A1L390 1219 aa6.63□□□□□ -1.35
CTNND1-226ENST00000530720 PIK3C2AO00443 1686 aa6.63□□□□□ -1.35
CTNND1-226ENST00000530720 SEMA3EO15041 775 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms