RNA–Protein interactions for RNA: ENST00000530701.1

FGFR1-235, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-235ENST00000530701 ZNF358Q9NW07 568 aa3.17□□□□□ -1.9
FGFR1-235ENST00000530701 PPP1R12BO60237 982 aaPredicted RBP3.16□□□□□ -1.9
FGFR1-235ENST00000530701 S1PR4O95977 384 aa3.16□□□□□ -1.9
FGFR1-235ENST00000530701 RECKO95980 971 aa3.16□□□□□ -1.9
FGFR1-235ENST00000530701 LDHBP07195 334 aaKnown RBP3.16□□□□□ -1.9
FGFR1-235ENST00000530701 P4HBP07237 508 aaKnown RBP3.16□□□□□ -1.9
FGFR1-235ENST00000530701 MPSTP25325 297 aa3.16□□□□□ -1.9
FGFR1-235ENST00000530701 VARSP26640 1264 aaKnown RBP3.16□□□□□ -1.9
FGFR1-235ENST00000530701 GDF10P55107 478 aa3.16□□□□□ -1.9
FGFR1-235ENST00000530701 PLCB3Q01970 1234 aa3.16□□□□□ -1.9
FGFR1-235ENST00000530701 PSMD2Q13200 908 aa3.16□□□□□ -1.9
FGFR1-235ENST00000530701 GNL2Q13823 731 aaKnown RBP3.16□□□□□ -1.9
FGFR1-235ENST00000530701 NAALADL2Q58DX5 795 aa3.16□□□□□ -1.9
FGFR1-235ENST00000530701 THSD4Q6ZMP0 1018 aa3.16□□□□□ -1.9
FGFR1-235ENST00000530701 TMC7Q7Z402 723 aa3.16□□□□□ -1.9
FGFR1-235ENST00000530701 CYP2U1Q7Z449 544 aa3.16□□□□□ -1.9
FGFR1-235ENST00000530701 TNS4Q8IZW8 715 aa3.16□□□□□ -1.9
FGFR1-235ENST00000530701 TMEM87AQ8NBN3 555 aa3.16□□□□□ -1.9
FGFR1-235ENST00000530701 EHBP1Q8NDI1 1231 aa3.16□□□□□ -1.9
FGFR1-235ENST00000530701 KCTD12Q96CX2 325 aaKnown RBP3.16□□□□□ -1.9
FGFR1-235ENST00000530701 OTUD5Q96G74 571 aa3.16□□□□□ -1.9
FGFR1-235ENST00000530701 C1QTNF2Q9BXJ5 285 aa3.16□□□□□ -1.9
FGFR1-235ENST00000530701 RBCK1Q9BYM8 510 aa3.16□□□□□ -1.9
FGFR1-235ENST00000530701 PRKD2Q9BZL6 878 aa3.16□□□□□ -1.9
FGFR1-235ENST00000530701 VTI1BQ9UEU0 232 aa3.16□□□□□ -1.9
FGFR1-235ENST00000530701 SERTAD1Q9UHV2 236 aa3.16□□□□□ -1.9
FGFR1-235ENST00000530701 MAP4K5Q9Y4K4 846 aa3.16□□□□□ -1.9
FGFR1-235ENST00000530701 ERVH48-1M5A8F1 160 aa3.15□□□□□ -1.91
FGFR1-235ENST00000530701 WASLO00401 505 aaPredicted RBP3.15□□□□□ -1.91
FGFR1-235ENST00000530701 SORBS3O60504 671 aa3.15□□□□□ -1.91
FGFR1-235ENST00000530701 PRPF40AO75400 957 aaKnown RBP3.15□□□□□ -1.91
FGFR1-235ENST00000530701 INHAP05111 366 aa3.15□□□□□ -1.91
FGFR1-235ENST00000530701 PCSK2P16519 638 aa3.15□□□□□ -1.91
FGFR1-235ENST00000530701 GTF2E1P29083 439 aaPredicted RBP3.15□□□□□ -1.91
FGFR1-235ENST00000530701 GGCXP38435 758 aa3.15□□□□□ -1.91
FGFR1-235ENST00000530701 USP5P45974 858 aa3.15□□□□□ -1.91
FGFR1-235ENST00000530701 SCTRP47872 440 aa3.15□□□□□ -1.91
FGFR1-235ENST00000530701 PTPN5P54829 565 aa3.15□□□□□ -1.91
FGFR1-235ENST00000530701 ERVK-9P63128 1117 aa3.15□□□□□ -1.91
FGFR1-235ENST00000530701 TAGLNQ01995 201 aaKnown RBP3.15□□□□□ -1.91
FGFR1-235ENST00000530701 C4orf48Q5BLP8 95 aa3.15□□□□□ -1.91
FGFR1-235ENST00000530701 INTS6LQ5JSJ4 861 aaKnown RBP3.15□□□□□ -1.91
FGFR1-235ENST00000530701 CAPN12Q6ZSI9 719 aa3.15□□□□□ -1.91
FGFR1-235ENST00000530701 FAM163AQ96GL9 167 aaPredicted RBP3.15□□□□□ -1.91
FGFR1-235ENST00000530701 BACH2Q9BYV9 841 aa3.15□□□□□ -1.91
FGFR1-235ENST00000530701 TSPAN10Q9H1Z9 355 aaPredicted RBP3.15□□□□□ -1.91
FGFR1-235ENST00000530701 STIM2Q9P246 746 aa3.15□□□□□ -1.91
FGFR1-235ENST00000530701 TMEM229AB2RXF0 380 aa3.14□□□□□ -1.91
FGFR1-235ENST00000530701 TREHO43280 583 aa3.14□□□□□ -1.91
FGFR1-235ENST00000530701 GNRH1P01148 92 aa3.14□□□□□ -1.91
FGFR1-235ENST00000530701 NEFLP07196 543 aa3.14□□□□□ -1.91
FGFR1-235ENST00000530701 NPR3P17342 541 aa3.14□□□□□ -1.91
FGFR1-235ENST00000530701 FSHRP23945 695 aa3.14□□□□□ -1.91
FGFR1-235ENST00000530701 BRD2P25440 801 aaKnown RBP3.14□□□□□ -1.91
FGFR1-235ENST00000530701 EIF1AXP47813 144 aaKnown RBP3.14□□□□□ -1.91
FGFR1-235ENST00000530701 WNT7BP56706 349 aa3.14□□□□□ -1.91
FGFR1-235ENST00000530701 PSMA6P60900 246 aaKnown RBP3.14□□□□□ -1.91
FGFR1-235ENST00000530701 SH3BP2P78314 561 aa3.14□□□□□ -1.91
FGFR1-235ENST00000530701 MYT1Q01538 1121 aa3.14□□□□□ -1.91
FGFR1-235ENST00000530701 EHHADHQ08426 723 aa3.14□□□□□ -1.91
FGFR1-235ENST00000530701 ALG1LQ6GMV1 187 aa3.14□□□□□ -1.91
FGFR1-235ENST00000530701 SLC9A9Q8IVB4 645 aa3.14□□□□□ -1.91
FGFR1-235ENST00000530701 FAM177A1Q8N128 213 aaPredicted RBP3.14□□□□□ -1.91
FGFR1-235ENST00000530701 NBPF15Q8N660 670 aa3.14□□□□□ -1.91
FGFR1-235ENST00000530701 NGLY1Q96IV0 654 aa3.14□□□□□ -1.91
FGFR1-235ENST00000530701 PURBQ96QR8 312 aaKnown RBP3.14□□□□□ -1.91
FGFR1-235ENST00000530701 CCSER2Q9H7U1 834 aa3.14□□□□□ -1.91
FGFR1-235ENST00000530701 CYLDQ9NQC7 956 aa3.14□□□□□ -1.91
FGFR1-235ENST00000530701 PARP2Q9UGN5 583 aa3.14□□□□□ -1.91
FGFR1-235ENST00000530701 A6NJY4 79 aa3.13□□□□□ -1.91
FGFR1-235ENST00000530701 NCLP19338 710 aaKnown RBP3.13□□□□□ -1.91
FGFR1-235ENST00000530701 SCNN1DP51172 638 aa3.13□□□□□ -1.91
FGFR1-235ENST00000530701 HDLBPQ00341 1268 aaKnown RBP3.13□□□□□ -1.91
FGFR1-235ENST00000530701 FMR1Q06787 632 aaKnown RBP eCLIP3.13□□□□□ -1.91
FGFR1-235ENST00000530701 TRIM32Q13049 653 aa3.13□□□□□ -1.91
FGFR1-235ENST00000530701 TLR1Q15399 786 aa3.13□□□□□ -1.91
FGFR1-235ENST00000530701 ECM1Q16610 540 aa3.13□□□□□ -1.91
FGFR1-235ENST00000530701 STAG2Q8N3U4 1231 aa3.13□□□□□ -1.91
FGFR1-235ENST00000530701 RNF34Q969K3 372 aa3.13□□□□□ -1.91
FGFR1-235ENST00000530701 DUSP9Q99956 384 aaKnown RBP3.13□□□□□ -1.91
FGFR1-235ENST00000530701 TANGO6Q9C0B7 1094 aa3.13□□□□□ -1.91
FGFR1-235ENST00000530701 OSBPL3Q9H4L5 887 aa3.13□□□□□ -1.91
FGFR1-235ENST00000530701 METTL5Q9NRN9 209 aaKnown RBP3.13□□□□□ -1.91
FGFR1-235ENST00000530701 PGPEP1Q9NXJ5 209 aa3.13□□□□□ -1.91
FGFR1-235ENST00000530701 FAM13BQ9NYF5 915 aa3.13□□□□□ -1.91
FGFR1-235ENST00000530701 ZNF232Q9UNY5 417 aa3.13□□□□□ -1.91
FGFR1-235ENST00000530701 PNMA6FA0A0J9YX94 578 aa3.12□□□□□ -1.91
FGFR1-235ENST00000530701 A0A1W2PRU2 124 aa3.12□□□□□ -1.91
FGFR1-235ENST00000530701 SERTM1A2A2V5 107 aa3.12□□□□□ -1.91
FGFR1-235ENST00000530701 PPM1GO15355 546 aaPredicted RBP3.12□□□□□ -1.91
FGFR1-235ENST00000530701 SMARCA5O60264 1052 aaPredicted RBP3.12□□□□□ -1.91
FGFR1-235ENST00000530701 CD2BP2O95400 341 aaKnown RBP3.12□□□□□ -1.91
FGFR1-235ENST00000530701 ATP2B1P20020 1258 aa3.12□□□□□ -1.91
FGFR1-235ENST00000530701 ZNF76P36508 570 aa3.12□□□□□ -1.91
FGFR1-235ENST00000530701 SMTNP53814 917 aa3.12□□□□□ -1.91
FGFR1-235ENST00000530701 DNM1Q05193 864 aaKnown RBP3.12□□□□□ -1.91
FGFR1-235ENST00000530701 MRPL58Q14197 206 aaKnown RBP3.12□□□□□ -1.91
FGFR1-235ENST00000530701 TJAP1Q5JTD0 557 aa3.12□□□□□ -1.91
FGFR1-235ENST00000530701 TBCELQ5QJ74 424 aa3.12□□□□□ -1.91
FGFR1-235ENST00000530701 COX20Q5RI15 118 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms