RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 RNMTO43148 476 aaKnown RBP22.8■■□□□ 1.24
CCS-205ENST00000530384 FCHSD2O94868 740 aa22.8■■□□□ 1.24
CCS-205ENST00000530384 NFATC2IPQ8NCF5 419 aa22.8■■□□□ 1.24
CCS-205ENST00000530384 MTFR1LQ9H019 292 aa22.8■■□□□ 1.24
CCS-205ENST00000530384 ADAMTS7Q9UKP4 1686 aa22.8■■□□□ 1.24
CCS-205ENST00000530384 PNPLA7Q6ZV29 1317 aa22.8■■□□□ 1.24
CCS-205ENST00000530384 C4BP0C0L5 1744 aa22.79■■□□□ 1.24
CCS-205ENST00000530384 ZNF831Q5JPB2 1677 aa22.79■■□□□ 1.24
CCS-205ENST00000530384 MRC1P22897 1456 aa22.79■■□□□ 1.24
CCS-205ENST00000530384 ATP6V1AP38606 617 aa22.78■■□□□ 1.24
CCS-205ENST00000530384 SLC16A10Q8TF71 515 aa22.78■■□□□ 1.24
CCS-205ENST00000530384 SLC52A2Q9HAB3 445 aa22.78■■□□□ 1.24
CCS-205ENST00000530384 LGR6Q9HBX8 967 aa22.78■■□□□ 1.24
CCS-205ENST00000530384 MAP3K5Q99683 1374 aa22.77■■□□□ 1.24
CCS-205ENST00000530384 GNAT3A8MTJ3 354 aa22.77■■□□□ 1.24
CCS-205ENST00000530384 PPP1R1BQ9UD71 204 aaPredicted RBP22.77■■□□□ 1.24
CCS-205ENST00000530384 FLAD1Q8NFF5 587 aa22.76■■□□□ 1.23
CCS-205ENST00000530384 AK7Q96M32 723 aa22.76■■□□□ 1.23
CCS-205ENST00000530384 RBM42Q9BTD8 480 aaKnown RBP22.76■■□□□ 1.23
CCS-205ENST00000530384 ATF5Q9Y2D1 282 aaPredicted RBP22.76■■□□□ 1.23
CCS-205ENST00000530384 MYBBP1AQ9BQG0 1328 aaKnown RBP22.76■■□□□ 1.23
CCS-205ENST00000530384 PHACTR3Q96KR7 559 aa22.75■■□□□ 1.23
CCS-205ENST00000530384 ITPK1Q13572 414 aa22.74■■□□□ 1.23
CCS-205ENST00000530384 LINC00116Q8NCU8 138 aa22.74■■□□□ 1.23
CCS-205ENST00000530384 UBR3Q6ZT12 1888 aa22.73■■□□□ 1.23
CCS-205ENST00000530384 NEFMP07197 916 aa22.73■■□□□ 1.23
CCS-205ENST00000530384 PTGER2P43116 358 aa22.73■■□□□ 1.23
CCS-205ENST00000530384 COL23A1Q86Y22 540 aaPredicted RBP22.72■■□□□ 1.23
CCS-205ENST00000530384 MSH5O43196 834 aa22.71■■□□□ 1.23
CCS-205ENST00000530384 PTCD1O75127 700 aaKnown RBP22.71■■□□□ 1.23
CCS-205ENST00000530384 SLC4A9Q96Q91 983 aa22.71■■□□□ 1.23
CCS-205ENST00000530384 PNNQ9H307 717 aaKnown RBP22.71■■□□□ 1.23
CCS-205ENST00000530384 ZNF316A6NFI3 1004 aaPredicted RBP22.7■■□□□ 1.22
CCS-205ENST00000530384 TEFQ10587 303 aa22.7■■□□□ 1.22
CCS-205ENST00000530384 IL17REQ8NFR9 667 aa22.7■■□□□ 1.22
CCS-205ENST00000530384 SGIP1Q9BQI5 828 aa22.7■■□□□ 1.22
CCS-205ENST00000530384 COL5A3P25940 1745 aaPredicted RBP22.7■■□□□ 1.22
CCS-205ENST00000530384 COL24A1Q17RW2 1714 aa22.69■■□□□ 1.22
CCS-205ENST00000530384 CICQ96RK0 1608 aaPredicted RBP22.69■■□□□ 1.22
CCS-205ENST00000530384 SSFA2P28290 1259 aa22.69■■□□□ 1.22
CCS-205ENST00000530384 PRKRIP1Q9H875 184 aaPredicted RBP22.69■■□□□ 1.22
CCS-205ENST00000530384 CEMIPQ8WUJ3 1361 aa22.68■■□□□ 1.22
CCS-205ENST00000530384 CNTNAP4Q9C0A0 1308 aa22.67■■□□□ 1.22
CCS-205ENST00000530384 GNPATO15228 680 aa22.67■■□□□ 1.22
CCS-205ENST00000530384 POLD1P28340 1107 aa22.67■■□□□ 1.22
CCS-205ENST00000530384 RC3H1Q5TC82 1133 aaKnown RBP22.67■■□□□ 1.22
CCS-205ENST00000530384 RTF1Q92541 710 aaKnown RBP22.67■■□□□ 1.22
CCS-205ENST00000530384 SIPA1L3O60292 1781 aaPredicted RBP22.67■■□□□ 1.22
CCS-205ENST00000530384 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.66■■□□□ 1.22
CCS-205ENST00000530384 HTATSF1O43719 755 aaKnown RBP22.66■■□□□ 1.22
CCS-205ENST00000530384 PHF14O94880 888 aa22.66■■□□□ 1.22
CCS-205ENST00000530384 SLC39A6Q13433 755 aa22.66■■□□□ 1.22
CCS-205ENST00000530384 TJP1Q07157 1748 aa22.65■■□□□ 1.22
CCS-205ENST00000530384 TTC5Q8N0Z6 440 aa22.65■■□□□ 1.22
CCS-205ENST00000530384 ARXQ96QS3 562 aa22.65■■□□□ 1.22
CCS-205ENST00000530384 PLEKHF1Q96S99 279 aa22.65■■□□□ 1.22
CCS-205ENST00000530384 UBR2Q8IWV8 1755 aa22.64■■□□□ 1.22
CCS-205ENST00000530384 KCPQ6ZWJ8 1503 aa22.64■■□□□ 1.21
CCS-205ENST00000530384 AMIGO3Q86WK7 504 aa22.64■■□□□ 1.21
CCS-205ENST00000530384 RTCBQ9Y3I0 505 aaKnown RBP22.64■■□□□ 1.21
CCS-205ENST00000530384 MAPK8IP3Q9UPT6 1336 aa22.63■■□□□ 1.21
CCS-205ENST00000530384 MYH14Q7Z406 1995 aaKnown RBP22.63■■□□□ 1.21
CCS-205ENST00000530384 DLG5Q8TDM6 1919 aa22.63■■□□□ 1.21
CCS-205ENST00000530384 VSIG10Q8N0Z9 540 aa22.62■■□□□ 1.21
CCS-205ENST00000530384 RPS6KA4O75676 772 aa22.61■■□□□ 1.21
CCS-205ENST00000530384 ADRA2BP18089 450 aa22.61■■□□□ 1.21
CCS-205ENST00000530384 CRKLP46109 303 aaKnown RBP22.61■■□□□ 1.21
CCS-205ENST00000530384 ZNF790Q6PG37 636 aa22.61■■□□□ 1.21
CCS-205ENST00000530384 TRAPPC3LQ5T215 181 aa22.6■■□□□ 1.21
CCS-205ENST00000530384 SMIM5Q71RC9 77 aa22.6■■□□□ 1.21
CCS-205ENST00000530384 MCM10Q7L590 875 aa22.6■■□□□ 1.21
CCS-205ENST00000530384 NFE2L2Q16236 605 aa22.59■■□□□ 1.21
CCS-205ENST00000530384 MSL1Q68DK7 614 aa22.59■■□□□ 1.21
CCS-205ENST00000530384 DNAJC10Q8IXB1 793 aa22.59■■□□□ 1.21
CCS-205ENST00000530384 FHDC1Q9C0D6 1143 aaPredicted RBP22.59■■□□□ 1.21
CCS-205ENST00000530384 BTBD11A6QL63 1104 aa22.58■■□□□ 1.21
CCS-205ENST00000530384 WDR43Q15061 677 aaKnown RBP eCLIP22.58■■□□□ 1.21
CCS-205ENST00000530384 SYT17Q9BSW7 474 aa22.57■■□□□ 1.2
CCS-205ENST00000530384 CYP19A1P11511 503 aaPredicted RBP22.56■■□□□ 1.2
CCS-205ENST00000530384 DCTN1Q14203 1278 aa22.56■■□□□ 1.2
CCS-205ENST00000530384 ZNF496Q96IT1 587 aaPredicted RBP22.56■■□□□ 1.2
CCS-205ENST00000530384 FMNL2Q96PY5 1086 aa22.56■■□□□ 1.2
CCS-205ENST00000530384 CCDC87Q9NVE4 849 aa22.56■■□□□ 1.2
CCS-205ENST00000530384 HEG1Q9ULI3 1381 aa22.55■■□□□ 1.2
CCS-205ENST00000530384 RFC4P35249 363 aa22.55■■□□□ 1.2
CCS-205ENST00000530384 INTS5Q6P9B9 1019 aaKnown RBP22.55■■□□□ 1.2
CCS-205ENST00000530384 ARHGEF1Q92888 912 aaKnown RBP22.55■■□□□ 1.2
CCS-205ENST00000530384 TEX13AQ9BXU3 409 aaPredicted RBP22.55■■□□□ 1.2
CCS-205ENST00000530384 C4AP0C0L4 1744 aa22.54■■□□□ 1.2
CCS-205ENST00000530384 DCAF8L1A6NGE4 600 aa22.53■■□□□ 1.2
CCS-205ENST00000530384 STARD3NLO95772 234 aa22.53■■□□□ 1.2
CCS-205ENST00000530384 TAF7Q15545 349 aaPredicted RBP22.53■■□□□ 1.2
CCS-205ENST00000530384 KLHL34Q8N239 644 aa22.52■■□□□ 1.2
CCS-205ENST00000530384 NLGN1Q8N2Q7 840 aa22.51■■□□□ 1.19
CCS-205ENST00000530384 PNISRQ8TF01 805 aaKnown RBP22.51■■□□□ 1.19
CCS-205ENST00000530384 KCNQ3O43525 872 aa22.5■■□□□ 1.19
CCS-205ENST00000530384 RIPK4P57078 832 aa22.5■■□□□ 1.19
CCS-205ENST00000530384 LMOD3Q0VAK6 560 aa22.5■■□□□ 1.19
CCS-205ENST00000530384 RUNDC1Q96C34 613 aa22.5■■□□□ 1.19
CCS-205ENST00000530384 ADAMTS8Q9UP79 889 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms