RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 KDM3BQ7LBC6 1761 aa13.87□□□□□ -0.19
SOX6-213ENST00000530378 HTATSF1O43719 755 aaKnown RBP13.87□□□□□ -0.19
SOX6-213ENST00000530378 PDE3BQ13370 1112 aa13.87□□□□□ -0.19
SOX6-213ENST00000530378 DUSP27Q5VZP5 1158 aa13.87□□□□□ -0.19
SOX6-213ENST00000530378 MBIPQ9NS73 344 aa13.87□□□□□ -0.19
SOX6-213ENST00000530378 SYTL4Q96C24 671 aaPredicted RBP13.86□□□□□ -0.19
SOX6-213ENST00000530378 ACSBG1Q96GR2 724 aa13.86□□□□□ -0.19
SOX6-213ENST00000530378 DCAF5Q96JK2 942 aa13.86□□□□□ -0.19
SOX6-213ENST00000530378 HSP90AB1P08238 724 aaKnown RBP13.85□□□□□ -0.19
SOX6-213ENST00000530378 GNAI1P63096 354 aa13.85□□□□□ -0.19
SOX6-213ENST00000530378 RBM6P78332 1123 aaKnown RBP13.85□□□□□ -0.19
SOX6-213ENST00000530378 CALD1Q05682 793 aaKnown RBP13.85□□□□□ -0.19
SOX6-213ENST00000530378 MYH16Q9H6N6 1097 aa13.85□□□□□ -0.19
SOX6-213ENST00000530378 IFT57Q9NWB7 429 aa13.85□□□□□ -0.19
SOX6-213ENST00000530378 TSPYL4Q9UJ04 414 aa13.85□□□□□ -0.19
SOX6-213ENST00000530378 MRC1P22897 1456 aa13.85□□□□□ -0.19
SOX6-213ENST00000530378 IL16Q14005 1332 aa13.85□□□□□ -0.19
SOX6-213ENST00000530378 CABP4P57796 275 aa13.85□□□□□ -0.19
SOX6-213ENST00000530378 KRT24Q2M2I5 525 aa13.85□□□□□ -0.19
SOX6-213ENST00000530378 NFATC2IPQ8NCF5 419 aa13.85□□□□□ -0.19
SOX6-213ENST00000530378 KCNQ3O43525 872 aa13.84□□□□□ -0.19
SOX6-213ENST00000530378 CFAP44Q96MT7 982 aa13.84□□□□□ -0.19
SOX6-213ENST00000530378 SLC52A2Q9HAB3 445 aa13.84□□□□□ -0.19
SOX6-213ENST00000530378 RGS12O14924 1447 aa13.84□□□□□ -0.19
SOX6-213ENST00000530378 ELL2O00472 640 aaPredicted RBP13.83□□□□□ -0.2
SOX6-213ENST00000530378 ZNF853P0CG23 659 aa13.83□□□□□ -0.2
SOX6-213ENST00000530378 RXRBP28702 533 aa13.83□□□□□ -0.2
SOX6-213ENST00000530378 EXOSC9Q06265 439 aaKnown RBP13.83□□□□□ -0.2
SOX6-213ENST00000530378 SLC39A6Q13433 755 aa13.83□□□□□ -0.2
SOX6-213ENST00000530378 BTBD11A6QL63 1104 aa13.83□□□□□ -0.2
SOX6-213ENST00000530378 NKX1-1Q15270 411 aaPredicted RBP13.83□□□□□ -0.2
SOX6-213ENST00000530378 TAF7Q15545 349 aaPredicted RBP13.83□□□□□ -0.2
SOX6-213ENST00000530378 TRMT2AQ8IZ69 625 aaKnown RBP13.83□□□□□ -0.2
SOX6-213ENST00000530378 CHL1O00533 1208 aa13.82□□□□□ -0.2
SOX6-213ENST00000530378 SBF2Q86WG5 1849 aa13.81□□□□□ -0.2
SOX6-213ENST00000530378 TMOD3Q9NYL9 352 aa13.81□□□□□ -0.2
SOX6-213ENST00000530378 PAPPAQ13219 1627 aa13.81□□□□□ -0.2
SOX6-213ENST00000530378 ONECUT3O60422 494 aaPredicted RBP13.8□□□□□ -0.2
SOX6-213ENST00000530378 PRIM1P49642 420 aaKnown RBP13.8□□□□□ -0.2
SOX6-213ENST00000530378 RNF216Q9NWF9 866 aaPredicted RBP13.8□□□□□ -0.2
SOX6-213ENST00000530378 C5P01031 1676 aa13.8□□□□□ -0.2
SOX6-213ENST00000530378 KCNQ2O43526 872 aa13.8□□□□□ -0.2
SOX6-213ENST00000530378 PTF1AQ7RTS3 328 aa13.8□□□□□ -0.2
SOX6-213ENST00000530378 TSPYL6Q8N831 410 aa13.8□□□□□ -0.2
SOX6-213ENST00000530378 C8orf58Q8NAV2 365 aa13.8□□□□□ -0.2
SOX6-213ENST00000530378 ERVV-2B6SEH9 535 aa13.79□□□□□ -0.2
SOX6-213ENST00000530378 TCERG1O14776 1098 aaKnown RBP13.79□□□□□ -0.2
SOX6-213ENST00000530378 PIGBQ92521 554 aa13.79□□□□□ -0.2
SOX6-213ENST00000530378 NHSQ6T4R5 1651 aa13.79□□□□□ -0.2
SOX6-213ENST00000530378 BTAF1O14981 1849 aa13.79□□□□□ -0.2
SOX6-213ENST00000530378 UBR2Q8IWV8 1755 aa13.79□□□□□ -0.2
SOX6-213ENST00000530378 KRT27Q7Z3Y8 459 aa13.78□□□□□ -0.2
SOX6-213ENST00000530378 BCL2L13Q9BXK5 485 aa13.78□□□□□ -0.2
SOX6-213ENST00000530378 NECTIN2Q92692 538 aa13.78□□□□□ -0.2
SOX6-213ENST00000530378 BCL9O00512 1426 aa13.77□□□□□ -0.2
SOX6-213ENST00000530378 ZNF790Q6PG37 636 aa13.77□□□□□ -0.21
SOX6-213ENST00000530378 TTC5Q8N0Z6 440 aa13.77□□□□□ -0.21
SOX6-213ENST00000530378 ASAP1Q9ULH1 1129 aa13.77□□□□□ -0.21
SOX6-213ENST00000530378 PRAMEF22A3QJZ6 481 aa13.76□□□□□ -0.21
SOX6-213ENST00000530378 PTCD1O75127 700 aaKnown RBP13.76□□□□□ -0.21
SOX6-213ENST00000530378 TWISTNBQ3B726 338 aaPredicted RBP13.76□□□□□ -0.21
SOX6-213ENST00000530378 KCPQ6ZWJ8 1503 aa13.76□□□□□ -0.21
SOX6-213ENST00000530378 EIF4A1P60842 406 aaKnown RBP13.76□□□□□ -0.21
SOX6-213ENST00000530378 ZNF496Q96IT1 587 aaPredicted RBP13.76□□□□□ -0.21
SOX6-213ENST00000530378 RCAN3Q9UKA8 241 aa13.76□□□□□ -0.21
SOX6-213ENST00000530378 SUPT16HQ9Y5B9 1047 aaKnown RBP13.74□□□□□ -0.21
SOX6-213ENST00000530378 LAMB4A4D0S4 1761 aa13.74□□□□□ -0.21
SOX6-213ENST00000530378 BCAR3O75815 825 aa13.74□□□□□ -0.21
SOX6-213ENST00000530378 RBM42Q9BTD8 480 aaKnown RBP13.74□□□□□ -0.21
SOX6-213ENST00000530378 ATG3Q9NT62 314 aa13.74□□□□□ -0.21
SOX6-213ENST00000530378 BABAM1Q9NWV8 329 aa13.74□□□□□ -0.21
SOX6-213ENST00000530378 EIF2S2P20042 333 aaKnown RBP13.73□□□□□ -0.21
SOX6-213ENST00000530378 VAMP4O75379 141 aa13.72□□□□□ -0.21
SOX6-213ENST00000530378 TRIM37O94972 964 aa13.72□□□□□ -0.21
SOX6-213ENST00000530378 HOXD11P31277 338 aaPredicted RBP13.72□□□□□ -0.21
SOX6-213ENST00000530378 SMC4Q9NTJ3 1288 aa13.72□□□□□ -0.21
SOX6-213ENST00000530378 TJP1Q07157 1748 aa13.72□□□□□ -0.21
SOX6-213ENST00000530378 RARSP54136 660 aaKnown RBP13.71□□□□□ -0.21
SOX6-213ENST00000530378 SSH1Q8WYL5 1049 aa13.71□□□□□ -0.21
SOX6-213ENST00000530378 FMNL2Q96PY5 1086 aa13.71□□□□□ -0.21
SOX6-213ENST00000530378 PALLDQ8WX93 1383 aa13.71□□□□□ -0.22
SOX6-213ENST00000530378 PLIN1O60240 522 aa13.71□□□□□ -0.22
SOX6-213ENST00000530378 PIP4K2AP48426 406 aaPredicted RBP13.71□□□□□ -0.22
SOX6-213ENST00000530378 IRX6P78412 446 aaPredicted RBP13.71□□□□□ -0.22
SOX6-213ENST00000530378 FAM196AQ6ZSG2 479 aa13.71□□□□□ -0.22
SOX6-213ENST00000530378 HEG1Q9ULI3 1381 aa13.7□□□□□ -0.22
SOX6-213ENST00000530378 GIGYF1O75420 1035 aaPredicted RBP13.7□□□□□ -0.22
SOX6-213ENST00000530378 ANXA1P04083 346 aa13.7□□□□□ -0.22
SOX6-213ENST00000530378 KCNQ4P56696 695 aa13.7□□□□□ -0.22
SOX6-213ENST00000530378 HDGFL1Q5TGJ6 251 aa13.7□□□□□ -0.22
SOX6-213ENST00000530378 FRAT1Q92837 279 aaPredicted RBP13.69□□□□□ -0.22
SOX6-213ENST00000530378 TNS1Q9HBL0 1735 aaKnown RBP13.69□□□□□ -0.22
SOX6-213ENST00000530378 SLC4A9Q96Q91 983 aa13.69□□□□□ -0.22
SOX6-213ENST00000530378 DCAF8L1A6NGE4 600 aa13.68□□□□□ -0.22
SOX6-213ENST00000530378 SNRPA1P09661 255 aaKnown RBP13.68□□□□□ -0.22
SOX6-213ENST00000530378 CANXP27824 592 aaKnown RBP13.68□□□□□ -0.22
SOX6-213ENST00000530378 DNAJC10Q8IXB1 793 aa13.68□□□□□ -0.22
SOX6-213ENST00000530378 CHPF2Q9P2E5 772 aa13.68□□□□□ -0.22
SOX6-213ENST00000530378 LY75O60449 1722 aa13.67□□□□□ -0.22
SOX6-213ENST00000530378 CT47B1P0C2W7 299 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms