RNA–Protein interactions for RNA: ENST00000530342.2

KDM2A-212, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-212ENST00000530342 MED1Q15648 1581 aaPredicted RBP12.51□□□□□ -0.41
KDM2A-212ENST00000530342 SSFA2P28290 1259 aa12.51□□□□□ -0.41
KDM2A-212ENST00000530342 CHMP4AQ9BY43 222 aa12.51□□□□□ -0.41
KDM2A-212ENST00000530342 TTC21BQ7Z4L5 1316 aa12.51□□□□□ -0.41
KDM2A-212ENST00000530342 C1orf167Q5SNV9 1468 aa12.5□□□□□ -0.41
KDM2A-212ENST00000530342 PRKAR2BP31323 418 aa12.5□□□□□ -0.41
KDM2A-212ENST00000530342 PDLIM2Q96JY6 352 aa12.5□□□□□ -0.41
KDM2A-212ENST00000530342 THUMPD2Q9BTF0 503 aaKnown RBP12.5□□□□□ -0.41
KDM2A-212ENST00000530342 PLEKHG3A1L390 1219 aa12.5□□□□□ -0.41
KDM2A-212ENST00000530342 ESPNB1AK53 854 aa12.5□□□□□ -0.41
KDM2A-212ENST00000530342 C8orf58Q8NAV2 365 aa12.5□□□□□ -0.41
KDM2A-212ENST00000530342 ZNF445P59923 1031 aa12.49□□□□□ -0.41
KDM2A-212ENST00000530342 PKP1Q13835 747 aa12.49□□□□□ -0.41
KDM2A-212ENST00000530342 SIPA1L3O60292 1781 aaPredicted RBP12.49□□□□□ -0.41
KDM2A-212ENST00000530342 DCTPP1Q9H773 170 aa12.49□□□□□ -0.41
KDM2A-212ENST00000530342 MYH15Q9Y2K3 1946 aa12.49□□□□□ -0.41
KDM2A-212ENST00000530342 AMPHP49418 695 aa12.49□□□□□ -0.41
KDM2A-212ENST00000530342 CHRNA2Q15822 529 aa12.49□□□□□ -0.41
KDM2A-212ENST00000530342 USP26Q9BXU7 913 aa12.49□□□□□ -0.41
KDM2A-212ENST00000530342 RTL1A6NKG5 1358 aa12.49□□□□□ -0.41
KDM2A-212ENST00000530342 U2SURPO15042 1029 aaKnown RBP12.48□□□□□ -0.41
KDM2A-212ENST00000530342 KLHL40Q2TBA0 621 aa12.48□□□□□ -0.41
KDM2A-212ENST00000530342 INTS3Q68E01 1043 aaKnown RBP12.48□□□□□ -0.41
KDM2A-212ENST00000530342 LMBRD1Q9NUN5 540 aa12.48□□□□□ -0.41
KDM2A-212ENST00000530342 BAG4O95429 457 aaKnown RBP12.48□□□□□ -0.41
KDM2A-212ENST00000530342 TTC22Q5TAA0 569 aa12.48□□□□□ -0.41
KDM2A-212ENST00000530342 STRCP1A6NGW2 1772 aa12.48□□□□□ -0.41
KDM2A-212ENST00000530342 IPO8O15397 1037 aaKnown RBP12.47□□□□□ -0.41
KDM2A-212ENST00000530342 CSB-PGBD3P0DP91 1061 aa12.47□□□□□ -0.41
KDM2A-212ENST00000530342 CCDC9Q9Y3X0 531 aaKnown RBP12.47□□□□□ -0.41
KDM2A-212ENST00000530342 MST1RQ04912 1400 aa12.46□□□□□ -0.41
KDM2A-212ENST00000530342 LTN1O94822 1766 aa12.46□□□□□ -0.41
KDM2A-212ENST00000530342 HSPA1LP34931 641 aa12.46□□□□□ -0.41
KDM2A-212ENST00000530342 OTUD7AQ8TE49 926 aaPredicted RBP12.46□□□□□ -0.41
KDM2A-212ENST00000530342 CFAP44Q96MT7 982 aa12.46□□□□□ -0.41
KDM2A-212ENST00000530342 EMILIN1Q9Y6C2 1016 aa12.46□□□□□ -0.41
KDM2A-212ENST00000530342 MEX3CQ5U5Q3 659 aaKnown RBP12.46□□□□□ -0.42
KDM2A-212ENST00000530342 GPT2Q8TD30 523 aa12.46□□□□□ -0.42
KDM2A-212ENST00000530342 PHRF1Q9P1Y6 1649 aaKnown RBP12.46□□□□□ -0.42
KDM2A-212ENST00000530342 A0A0G2JS52 829 aa12.45□□□□□ -0.42
KDM2A-212ENST00000530342 C16orf71Q8IYS4 520 aaPredicted RBP12.45□□□□□ -0.42
KDM2A-212ENST00000530342 PRDM11Q9NQV5 511 aa12.45□□□□□ -0.42
KDM2A-212ENST00000530342 STRN4Q9NRL3 753 aa12.45□□□□□ -0.42
KDM2A-212ENST00000530342 RGPD2P0DJD1 1756 aa12.45□□□□□ -0.42
KDM2A-212ENST00000530342 LMO7Q8WWI1 1683 aa12.45□□□□□ -0.42
KDM2A-212ENST00000530342 LRRC59Q96AG4 307 aaKnown RBP12.44□□□□□ -0.42
KDM2A-212ENST00000530342 ANKRD45Q5TZF3 282 aa12.44□□□□□ -0.42
KDM2A-212ENST00000530342 SKOR2Q2VWA4 1001 aaPredicted RBP12.44□□□□□ -0.42
KDM2A-212ENST00000530342 FAM83GA6ND36 823 aa12.43□□□□□ -0.42
KDM2A-212ENST00000530342 CDC45O75419 566 aa12.43□□□□□ -0.42
KDM2A-212ENST00000530342 CEP85Q6P2H3 762 aa12.43□□□□□ -0.42
KDM2A-212ENST00000530342 ANKRD44Q8N8A2 993 aa12.43□□□□□ -0.42
KDM2A-212ENST00000530342 USP31Q70CQ4 1352 aa12.43□□□□□ -0.42
KDM2A-212ENST00000530342 OSBPL3Q9H4L5 887 aa12.42□□□□□ -0.42
KDM2A-212ENST00000530342 NSFL1CQ9UNZ2 370 aaKnown RBP12.42□□□□□ -0.42
KDM2A-212ENST00000530342 ADAMTS7Q9UKP4 1686 aa12.42□□□□□ -0.42
KDM2A-212ENST00000530342 CAMTA1Q9Y6Y1 1673 aa12.42□□□□□ -0.42
KDM2A-212ENST00000530342 PXDNLA1KZ92 1463 aa12.42□□□□□ -0.42
KDM2A-212ENST00000530342 GCP02774 474 aa12.42□□□□□ -0.42
KDM2A-212ENST00000530342 TWISTNBQ3B726 338 aaPredicted RBP12.42□□□□□ -0.42
KDM2A-212ENST00000530342 PNNQ9H307 717 aaKnown RBP12.42□□□□□ -0.42
KDM2A-212ENST00000530342 USP6P35125 1406 aa12.42□□□□□ -0.42
KDM2A-212ENST00000530342 ANKARQ7Z5J8 1434 aa12.41□□□□□ -0.42
KDM2A-212ENST00000530342 RRP9O43818 475 aaKnown RBP12.41□□□□□ -0.42
KDM2A-212ENST00000530342 HMOX1P09601 288 aa12.41□□□□□ -0.42
KDM2A-212ENST00000530342 CHMP4BQ9H444 224 aaKnown RBP12.41□□□□□ -0.42
KDM2A-212ENST00000530342 EVA1CP58658 441 aa12.41□□□□□ -0.42
KDM2A-212ENST00000530342 GNAI1P63096 354 aa12.41□□□□□ -0.42
KDM2A-212ENST00000530342 CCDC173Q0VFZ6 552 aa12.41□□□□□ -0.42
KDM2A-212ENST00000530342 ZSCAN23Q3MJ62 389 aa12.41□□□□□ -0.42
KDM2A-212ENST00000530342 C8orf37Q96NL8 207 aa12.41□□□□□ -0.42
KDM2A-212ENST00000530342 LTBP4Q8N2S1 1624 aa12.41□□□□□ -0.42
KDM2A-212ENST00000530342 GBP4Q96PP9 640 aa12.41□□□□□ -0.42
KDM2A-212ENST00000530342 RBSNQ9H1K0 784 aa12.41□□□□□ -0.42
KDM2A-212ENST00000530342 ARHGEF10O15013 1369 aa12.41□□□□□ -0.42
KDM2A-212ENST00000530342 KRT24Q2M2I5 525 aa12.4□□□□□ -0.42
KDM2A-212ENST00000530342 KDRP35968 1356 aa12.4□□□□□ -0.42
KDM2A-212ENST00000530342 CHL1O00533 1208 aa12.4□□□□□ -0.42
KDM2A-212ENST00000530342 SDSP20132 328 aa12.4□□□□□ -0.42
KDM2A-212ENST00000530342 ZGPATQ8N5A5 531 aaKnown RBP12.4□□□□□ -0.42
KDM2A-212ENST00000530342 PTMSP20962 102 aa12.4□□□□□ -0.43
KDM2A-212ENST00000530342 RABEP1Q15276 862 aa12.4□□□□□ -0.43
KDM2A-212ENST00000530342 NGLY1Q96IV0 654 aa12.4□□□□□ -0.43
KDM2A-212ENST00000530342 DDX60Q8IY21 1712 aaKnown RBP12.4□□□□□ -0.43
KDM2A-212ENST00000530342 CHAMP1Q96JM3 812 aa12.39□□□□□ -0.43
KDM2A-212ENST00000530342 ZNF500O60304 480 aaPredicted RBP12.39□□□□□ -0.43
KDM2A-212ENST00000530342 OFD1O75665 1012 aa12.39□□□□□ -0.43
KDM2A-212ENST00000530342 HSP90AB2PQ58FF8 381 aa12.39□□□□□ -0.43
KDM2A-212ENST00000530342 TTC21AQ8NDW8 1320 aa12.39□□□□□ -0.43
KDM2A-212ENST00000530342 HSP90AB1P08238 724 aaKnown RBP12.39□□□□□ -0.43
KDM2A-212ENST00000530342 SPATA31A3Q5VYP0 1347 aa12.39□□□□□ -0.43
KDM2A-212ENST00000530342 FOXD4L1Q9NU39 408 aa12.39□□□□□ -0.43
KDM2A-212ENST00000530342 NLRP2Q9NX02 1062 aa12.39□□□□□ -0.43
KDM2A-212ENST00000530342 HS1BP3Q53T59 392 aa12.38□□□□□ -0.43
KDM2A-212ENST00000530342 USHBP1Q8N6Y0 703 aa12.38□□□□□ -0.43
KDM2A-212ENST00000530342 DCCP43146 1447 aa12.38□□□□□ -0.43
KDM2A-212ENST00000530342 TERF1P54274 439 aa12.38□□□□□ -0.43
KDM2A-212ENST00000530342 TMEM63CQ9P1W3 806 aa12.38□□□□□ -0.43
KDM2A-212ENST00000530342 LAMA4Q16363 1823 aa12.37□□□□□ -0.43
KDM2A-212ENST00000530342 CUL4AQ13619 759 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms