RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 DYNC1I1O14576 645 aa18.12■□□□□ 0.49
PCDHA4-203ENST00000530339 SMARCA5O60264 1052 aaPredicted RBP18.12■□□□□ 0.49
PCDHA4-203ENST00000530339 AMOTQ4VCS5 1084 aa18.12■□□□□ 0.49
PCDHA4-203ENST00000530339 CEP126Q9P2H0 1117 aa18.12■□□□□ 0.49
PCDHA4-203ENST00000530339 SFPQP23246 707 aaKnown RBP eCLIP18.11■□□□□ 0.49
PCDHA4-203ENST00000530339 STRN4Q9NRL3 753 aa18.11■□□□□ 0.49
PCDHA4-203ENST00000530339 RRP12Q5JTH9 1297 aaKnown RBP18.11■□□□□ 0.49
PCDHA4-203ENST00000530339 THUMPD2Q9BTF0 503 aaKnown RBP18.11■□□□□ 0.49
PCDHA4-203ENST00000530339 RBM42Q9BTD8 480 aaKnown RBP18.11■□□□□ 0.49
PCDHA4-203ENST00000530339 MAPKBP1O60336 1514 aa18.11■□□□□ 0.49
PCDHA4-203ENST00000530339 RALGAPBQ86X10 1494 aa18.11■□□□□ 0.49
PCDHA4-203ENST00000530339 PLB1Q6P1J6 1458 aa18.11■□□□□ 0.49
PCDHA4-203ENST00000530339 NUTM1Q86Y26 1132 aa18.1■□□□□ 0.49
PCDHA4-203ENST00000530339 FYB1O15117 783 aa18.1■□□□□ 0.49
PCDHA4-203ENST00000530339 CD109Q6YHK3 1445 aa18.1■□□□□ 0.49
PCDHA4-203ENST00000530339 PRDM10Q9NQV6 1147 aa18.1■□□□□ 0.49
PCDHA4-203ENST00000530339 ERICH4A6NGS2 130 aa18.1■□□□□ 0.49
PCDHA4-203ENST00000530339 TTC21BQ7Z4L5 1316 aa18.1■□□□□ 0.49
PCDHA4-203ENST00000530339 C8orf34Q49A92 452 aa18.09■□□□□ 0.49
PCDHA4-203ENST00000530339 ANO10Q9NW15 660 aa18.09■□□□□ 0.49
PCDHA4-203ENST00000530339 CGNQ9P2M7 1197 aaKnown RBP18.09■□□□□ 0.49
PCDHA4-203ENST00000530339 ANKRD36BQ8N2N9 1353 aa18.09■□□□□ 0.49
PCDHA4-203ENST00000530339 RRS1Q15050 365 aaKnown RBP18.09■□□□□ 0.49
PCDHA4-203ENST00000530339 ODF2Q5BJF6 829 aa18.09■□□□□ 0.49
PCDHA4-203ENST00000530339 KIAA0754O94854 1291 aa18.09■□□□□ 0.49
PCDHA4-203ENST00000530339 LIMCH1Q9UPQ0 1083 aa18.09■□□□□ 0.49
PCDHA4-203ENST00000530339 AKAP2Q9Y2D5 859 aa18.08■□□□□ 0.49
PCDHA4-203ENST00000530339 UVSSAQ2YD98 709 aa18.08■□□□□ 0.49
PCDHA4-203ENST00000530339 LARP1Q6PKG0 1096 aaKnown RBP18.08■□□□□ 0.49
PCDHA4-203ENST00000530339 HMGB1P09429 215 aaKnown RBP18.08■□□□□ 0.48
PCDHA4-203ENST00000530339 TOM1L2Q6ZVM7 507 aa18.08■□□□□ 0.48
PCDHA4-203ENST00000530339 PRIMPOLQ96LW4 560 aa18.08■□□□□ 0.48
PCDHA4-203ENST00000530339 HDAC1Q13547 482 aaPredicted RBP18.08■□□□□ 0.48
PCDHA4-203ENST00000530339 CFAP100Q494V2 611 aa18.08■□□□□ 0.48
PCDHA4-203ENST00000530339 NUTM2BA6NNL0 878 aaPredicted RBP18.07■□□□□ 0.48
PCDHA4-203ENST00000530339 NUTM2EB1AL46 878 aaPredicted RBP18.07■□□□□ 0.48
PCDHA4-203ENST00000530339 NUTM2AQ8IVF1 878 aaPredicted RBP18.07■□□□□ 0.48
PCDHA4-203ENST00000530339 CEP131Q9UPN4 1083 aa18.07■□□□□ 0.48
PCDHA4-203ENST00000530339 PRPF40BQ6NWY9 871 aaKnown RBP18.07■□□□□ 0.48
PCDHA4-203ENST00000530339 ITSN2Q9NZM3 1697 aa18.07■□□□□ 0.48
PCDHA4-203ENST00000530339 NEMFO60524 1076 aa18.07■□□□□ 0.48
PCDHA4-203ENST00000530339 TNNT1P13805 278 aa18.07■□□□□ 0.48
PCDHA4-203ENST00000530339 IKQ13123 557 aaPredicted RBP18.07■□□□□ 0.48
PCDHA4-203ENST00000530339 TAF7Q15545 349 aaPredicted RBP18.07■□□□□ 0.48
PCDHA4-203ENST00000530339 WWC2Q6AWC2 1192 aa18.07■□□□□ 0.48
PCDHA4-203ENST00000530339 DDX11Q96FC9 970 aa18.07■□□□□ 0.48
PCDHA4-203ENST00000530339 PODXL2Q9NZ53 605 aa18.07■□□□□ 0.48
PCDHA4-203ENST00000530339 CLIP2Q9UDT6 1046 aa18.07■□□□□ 0.48
PCDHA4-203ENST00000530339 MPHOSPH8Q99549 860 aa18.07■□□□□ 0.48
PCDHA4-203ENST00000530339 PPP1R1BQ9UD71 204 aaPredicted RBP18.07■□□□□ 0.48
PCDHA4-203ENST00000530339 GOLGA6L10A6NI86 522 aa18.06■□□□□ 0.48
PCDHA4-203ENST00000530339 ZSCAN23Q3MJ62 389 aa18.06■□□□□ 0.48
PCDHA4-203ENST00000530339 ZSCAN12O43309 604 aa18.06■□□□□ 0.48
PCDHA4-203ENST00000530339 IMMTQ16891 758 aaKnown RBP18.06■□□□□ 0.48
PCDHA4-203ENST00000530339 SKIDA1Q1XH10 827 aa18.06■□□□□ 0.48
PCDHA4-203ENST00000530339 U3KPZ7 1027 aaPredicted RBP18.06■□□□□ 0.48
PCDHA4-203ENST00000530339 RAPGEF3O95398 923 aa18.06■□□□□ 0.48
PCDHA4-203ENST00000530339 ADCY5O95622 1261 aa18.06■□□□□ 0.48
PCDHA4-203ENST00000530339 CCDC181Q5TID7 509 aa18.06■□□□□ 0.48
PCDHA4-203ENST00000530339 SAMD1Q6SPF0 538 aaPredicted RBP18.06■□□□□ 0.48
PCDHA4-203ENST00000530339 DDX19AQ9NUU7 478 aaKnown RBP18.06■□□□□ 0.48
PCDHA4-203ENST00000530339 CTAGE5O15320 804 aa18.05■□□□□ 0.48
PCDHA4-203ENST00000530339 GBP3Q9H0R5 595 aa18.05■□□□□ 0.48
PCDHA4-203ENST00000530339 PRDM11Q9NQV5 511 aa18.05■□□□□ 0.48
PCDHA4-203ENST00000530339 USP8P40818 1118 aa18.05■□□□□ 0.48
PCDHA4-203ENST00000530339 IQCEQ6IPM2 695 aa18.05■□□□□ 0.48
PCDHA4-203ENST00000530339 ARHGAP29Q52LW3 1261 aa18.05■□□□□ 0.48
PCDHA4-203ENST00000530339 CCDC102AQ96A19 550 aa18.05■□□□□ 0.48
PCDHA4-203ENST00000530339 LRSAM1Q6UWE0 723 aa18.04■□□□□ 0.48
PCDHA4-203ENST00000530339 DEF6Q9H4E7 631 aa18.04■□□□□ 0.48
PCDHA4-203ENST00000530339 CALRP27797 417 aaKnown RBP18.04■□□□□ 0.48
PCDHA4-203ENST00000530339 ARHGAP45Q92619 1136 aa18.04■□□□□ 0.48
PCDHA4-203ENST00000530339 PANK2Q9BZ23 570 aa18.04■□□□□ 0.48
PCDHA4-203ENST00000530339 C14orf93Q9H972 538 aaKnown RBP18.04■□□□□ 0.48
PCDHA4-203ENST00000530339 UGGT2Q9NYU1 1516 aa18.04■□□□□ 0.48
PCDHA4-203ENST00000530339 EPB41L2O43491 1005 aaKnown RBP18.04■□□□□ 0.48
PCDHA4-203ENST00000530339 SOGA3Q5TF21 947 aa18.04■□□□□ 0.48
PCDHA4-203ENST00000530339 ERLIN2O94905 339 aa18.03■□□□□ 0.48
PCDHA4-203ENST00000530339 HSP90AB2PQ58FF8 381 aa18.03■□□□□ 0.48
PCDHA4-203ENST00000530339 C16orf45Q96MC5 204 aaPredicted RBP18.03■□□□□ 0.48
PCDHA4-203ENST00000530339 GDPD2Q9HCC8 539 aa18.03■□□□□ 0.48
PCDHA4-203ENST00000530339 PCDHB15Q9Y5E8 787 aa18.03■□□□□ 0.48
PCDHA4-203ENST00000530339 SNX21Q969T3 373 aa18.03■□□□□ 0.48
PCDHA4-203ENST00000530339 UBAC1Q9BSL1 405 aa18.03■□□□□ 0.48
PCDHA4-203ENST00000530339 ZMYND15Q9H091 742 aa18.03■□□□□ 0.48
PCDHA4-203ENST00000530339 DISP3Q9P2K9 1392 aa18.03■□□□□ 0.48
PCDHA4-203ENST00000530339 NUCB1Q02818 461 aa18.03■□□□□ 0.48
PCDHA4-203ENST00000530339 RBM27Q9P2N5 1060 aaKnown RBP18.03■□□□□ 0.48
PCDHA4-203ENST00000530339 CALCOCO1Q9P1Z2 691 aa18.02■□□□□ 0.48
PCDHA4-203ENST00000530339 WASLO00401 505 aaPredicted RBP18.02■□□□□ 0.48
PCDHA4-203ENST00000530339 STX6O43752 255 aa18.02■□□□□ 0.48
PCDHA4-203ENST00000530339 PPP4R3BQ5MIZ7 849 aa18.02■□□□□ 0.48
PCDHA4-203ENST00000530339 TTC22Q5TAA0 569 aa18.02■□□□□ 0.48
PCDHA4-203ENST00000530339 MCM10Q7L590 875 aa18.02■□□□□ 0.48
PCDHA4-203ENST00000530339 KRT18P05783 430 aaKnown RBP18.02■□□□□ 0.47
PCDHA4-203ENST00000530339 UBE2HP62256 183 aa18.02■□□□□ 0.47
PCDHA4-203ENST00000530339 EIF2AK4Q9P2K8 1649 aaKnown RBP18.02■□□□□ 0.47
PCDHA4-203ENST00000530339 STARD3NLO95772 234 aa18.01■□□□□ 0.47
PCDHA4-203ENST00000530339 CKAP2LQ8IYA6 745 aa18.01■□□□□ 0.47
PCDHA4-203ENST00000530339 SYCP1Q15431 976 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms