RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 PHACTR3Q96KR7 559 aa22.53■■□□□ 1.2
SF3B2-209ENST00000530322 NFATC2IPQ8NCF5 419 aa22.52■■□□□ 1.2
SF3B2-209ENST00000530322 MRC1P22897 1456 aa22.52■■□□□ 1.2
SF3B2-209ENST00000530322 LOC102724428A0A0B4J2F2 783 aa22.51■■□□□ 1.19
SF3B2-209ENST00000530322 SIK1P57059 783 aa22.51■■□□□ 1.19
SF3B2-209ENST00000530322 MAP3K5Q99683 1374 aa22.5■■□□□ 1.19
SF3B2-209ENST00000530322 ZNF831Q5JPB2 1677 aa22.5■■□□□ 1.19
SF3B2-209ENST00000530322 PRKRIP1Q9H875 184 aaPredicted RBP22.5■■□□□ 1.19
SF3B2-209ENST00000530322 SLC52A2Q9HAB3 445 aa22.5■■□□□ 1.19
SF3B2-209ENST00000530322 C4BP0C0L5 1744 aa22.5■■□□□ 1.19
SF3B2-209ENST00000530322 GNAT3A8MTJ3 354 aa22.49■■□□□ 1.19
SF3B2-209ENST00000530322 HMGB2P26583 209 aaKnown RBP22.49■■□□□ 1.19
SF3B2-209ENST00000530322 TFCP2L1Q9NZI6 479 aa22.48■■□□□ 1.19
SF3B2-209ENST00000530322 SPON1Q9HCB6 807 aa22.47■■□□□ 1.19
SF3B2-209ENST00000530322 PNPLA7Q6ZV29 1317 aa22.47■■□□□ 1.19
SF3B2-209ENST00000530322 ITPK1Q13572 414 aa22.46■■□□□ 1.19
SF3B2-209ENST00000530322 SLC4A9Q96Q91 983 aa22.46■■□□□ 1.19
SF3B2-209ENST00000530322 ZBTB7AO95365 584 aa22.45■■□□□ 1.18
SF3B2-209ENST00000530322 ATP6V1AP38606 617 aa22.45■■□□□ 1.18
SF3B2-209ENST00000530322 LINC00116Q8NCU8 138 aa22.45■■□□□ 1.18
SF3B2-209ENST00000530322 IL17REQ8NFR9 667 aa22.45■■□□□ 1.18
SF3B2-209ENST00000530322 SIPA1L3O60292 1781 aaPredicted RBP22.45■■□□□ 1.18
SF3B2-209ENST00000530322 UBR3Q6ZT12 1888 aa22.44■■□□□ 1.18
SF3B2-209ENST00000530322 PLEKHF1Q96S99 279 aa22.44■■□□□ 1.18
SF3B2-209ENST00000530322 RBM42Q9BTD8 480 aaKnown RBP22.44■■□□□ 1.18
SF3B2-209ENST00000530322 COL5A3P25940 1745 aaPredicted RBP22.43■■□□□ 1.18
SF3B2-209ENST00000530322 CEMIPQ8WUJ3 1361 aa22.43■■□□□ 1.18
SF3B2-209ENST00000530322 DLG5Q8TDM6 1919 aa22.42■■□□□ 1.18
SF3B2-209ENST00000530322 PTCD1O75127 700 aaKnown RBP22.42■■□□□ 1.18
SF3B2-209ENST00000530322 MTFR1LQ9H019 292 aa22.42■■□□□ 1.18
SF3B2-209ENST00000530322 CICQ96RK0 1608 aaPredicted RBP22.42■■□□□ 1.18
SF3B2-209ENST00000530322 AK7Q96M32 723 aa22.41■■□□□ 1.18
SF3B2-209ENST00000530322 ATF5Q9Y2D1 282 aaPredicted RBP22.41■■□□□ 1.18
SF3B2-209ENST00000530322 UBR2Q8IWV8 1755 aa22.4■■□□□ 1.18
SF3B2-209ENST00000530322 PTGER2P43116 358 aa22.4■■□□□ 1.18
SF3B2-209ENST00000530322 SLC39A6Q13433 755 aa22.4■■□□□ 1.18
SF3B2-209ENST00000530322 COL23A1Q86Y22 540 aaPredicted RBP22.4■■□□□ 1.18
SF3B2-209ENST00000530322 SLC16A10Q8TF71 515 aa22.4■■□□□ 1.18
SF3B2-209ENST00000530322 PNNQ9H307 717 aaKnown RBP22.4■■□□□ 1.18
SF3B2-209ENST00000530322 TJP1Q07157 1748 aa22.4■■□□□ 1.18
SF3B2-209ENST00000530322 COL24A1Q17RW2 1714 aa22.4■■□□□ 1.18
SF3B2-209ENST00000530322 NEFMP07197 916 aa22.39■■□□□ 1.17
SF3B2-209ENST00000530322 TEFQ10587 303 aa22.39■■□□□ 1.17
SF3B2-209ENST00000530322 AMIGO3Q86WK7 504 aa22.39■■□□□ 1.17
SF3B2-209ENST00000530322 KCPQ6ZWJ8 1503 aa22.39■■□□□ 1.17
SF3B2-209ENST00000530322 SGIP1Q9BQI5 828 aa22.38■■□□□ 1.17
SF3B2-209ENST00000530322 MYH14Q7Z406 1995 aaKnown RBP22.38■■□□□ 1.17
SF3B2-209ENST00000530322 HTATSF1O43719 755 aaKnown RBP22.37■■□□□ 1.17
SF3B2-209ENST00000530322 FLAD1Q8NFF5 587 aa22.37■■□□□ 1.17
SF3B2-209ENST00000530322 MCM10Q7L590 875 aa22.36■■□□□ 1.17
SF3B2-209ENST00000530322 RTF1Q92541 710 aaKnown RBP22.36■■□□□ 1.17
SF3B2-209ENST00000530322 CNTNAP4Q9C0A0 1308 aa22.35■■□□□ 1.17
SF3B2-209ENST00000530322 SSFA2P28290 1259 aa22.35■■□□□ 1.17
SF3B2-209ENST00000530322 NFE2L2Q16236 605 aa22.35■■□□□ 1.17
SF3B2-209ENST00000530322 RC3H1Q5TC82 1133 aaKnown RBP22.35■■□□□ 1.17
SF3B2-209ENST00000530322 SMIM5Q71RC9 77 aa22.35■■□□□ 1.17
SF3B2-209ENST00000530322 MAPK8IP3Q9UPT6 1336 aa22.34■■□□□ 1.17
SF3B2-209ENST00000530322 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.34■■□□□ 1.17
SF3B2-209ENST00000530322 GNPATO15228 680 aa22.34■■□□□ 1.17
SF3B2-209ENST00000530322 MSH5O43196 834 aa22.34■■□□□ 1.17
SF3B2-209ENST00000530322 DCTN1Q14203 1278 aa22.34■■□□□ 1.17
SF3B2-209ENST00000530322 PPP1R1BQ9UD71 204 aaPredicted RBP22.34■■□□□ 1.17
SF3B2-209ENST00000530322 PHF14O94880 888 aa22.33■■□□□ 1.17
SF3B2-209ENST00000530322 WDR43Q15061 677 aaKnown RBP eCLIP22.33■■□□□ 1.17
SF3B2-209ENST00000530322 ZNF790Q6PG37 636 aa22.33■■□□□ 1.17
SF3B2-209ENST00000530322 TTC5Q8N0Z6 440 aa22.32■■□□□ 1.16
SF3B2-209ENST00000530322 CRKLP46109 303 aaKnown RBP22.31■■□□□ 1.16
SF3B2-209ENST00000530322 DNAJC10Q8IXB1 793 aa22.31■■□□□ 1.16
SF3B2-209ENST00000530322 VSIG10Q8N0Z9 540 aa22.31■■□□□ 1.16
SF3B2-209ENST00000530322 ADAMTS8Q9UP79 889 aa22.31■■□□□ 1.16
SF3B2-209ENST00000530322 BTBD11A6QL63 1104 aa22.3■■□□□ 1.16
SF3B2-209ENST00000530322 RPS6KA4O75676 772 aa22.3■■□□□ 1.16
SF3B2-209ENST00000530322 RTCBQ9Y3I0 505 aaKnown RBP22.3■■□□□ 1.16
SF3B2-209ENST00000530322 ZNF496Q96IT1 587 aaPredicted RBP22.29■■□□□ 1.16
SF3B2-209ENST00000530322 ANP32CO43423 234 aa22.28■■□□□ 1.16
SF3B2-209ENST00000530322 CYP19A1P11511 503 aaPredicted RBP22.28■■□□□ 1.16
SF3B2-209ENST00000530322 INTS5Q6P9B9 1019 aaKnown RBP22.28■■□□□ 1.16
SF3B2-209ENST00000530322 CCDC146Q8IYE0 955 aa22.28■■□□□ 1.16
SF3B2-209ENST00000530322 HEG1Q9ULI3 1381 aa22.27■■□□□ 1.16
SF3B2-209ENST00000530322 KCNQ3O43525 872 aa22.27■■□□□ 1.16
SF3B2-209ENST00000530322 TMPOP42166 694 aaKnown RBP22.27■■□□□ 1.16
SF3B2-209ENST00000530322 CCDC184Q52MB2 194 aa22.27■■□□□ 1.16
SF3B2-209ENST00000530322 MSL1Q68DK7 614 aa22.27■■□□□ 1.16
SF3B2-209ENST00000530322 ARXQ96QS3 562 aa22.27■■□□□ 1.16
SF3B2-209ENST00000530322 C4AP0C0L4 1744 aa22.26■■□□□ 1.15
SF3B2-209ENST00000530322 ADRA2BP18089 450 aa22.26■■□□□ 1.15
SF3B2-209ENST00000530322 POLD1P28340 1107 aa22.26■■□□□ 1.15
SF3B2-209ENST00000530322 TAF7Q15545 349 aaPredicted RBP22.26■■□□□ 1.15
SF3B2-209ENST00000530322 TRAPPC3LQ5T215 181 aa22.26■■□□□ 1.15
SF3B2-209ENST00000530322 RUNDC1Q96C34 613 aa22.26■■□□□ 1.15
SF3B2-209ENST00000530322 RIPK4P57078 832 aa22.25■■□□□ 1.15
SF3B2-209ENST00000530322 ARHGEF1Q92888 912 aaKnown RBP22.25■■□□□ 1.15
SF3B2-209ENST00000530322 FMNL2Q96PY5 1086 aa22.25■■□□□ 1.15
SF3B2-209ENST00000530322 CCDC87Q9NVE4 849 aa22.25■■□□□ 1.15
SF3B2-209ENST00000530322 THUMPD2Q9BTF0 503 aaKnown RBP22.24■■□□□ 1.15
SF3B2-209ENST00000530322 KDM3BQ7LBC6 1761 aa22.24■■□□□ 1.15
SF3B2-209ENST00000530322 FHDC1Q9C0D6 1143 aaPredicted RBP22.23■■□□□ 1.15
SF3B2-209ENST00000530322 TEX13AQ9BXU3 409 aaPredicted RBP22.22■■□□□ 1.15
SF3B2-209ENST00000530322 RRP7AQ9Y3A4 280 aaKnown RBP22.22■■□□□ 1.15
SF3B2-209ENST00000530322 STARD3NLO95772 234 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms