RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 PRR20BP86481 221 aa6.94□□□□□ -1.3
SVIP-203ENST00000529848 PRR20AP86496 221 aa6.94□□□□□ -1.3
SVIP-203ENST00000529848 CBLBQ13191 982 aa6.94□□□□□ -1.3
SVIP-203ENST00000529848 OCLNQ16625 522 aa6.94□□□□□ -1.3
SVIP-203ENST00000529848 TNS4Q8IZW8 715 aa6.94□□□□□ -1.3
SVIP-203ENST00000529848 TIMP2P16035 220 aa6.93□□□□□ -1.3
SVIP-203ENST00000529848 SMPD1P17405 629 aa6.93□□□□□ -1.3
SVIP-203ENST00000529848 IGFBP4P22692 258 aa6.93□□□□□ -1.3
SVIP-203ENST00000529848 WEE1P30291 646 aa6.93□□□□□ -1.3
SVIP-203ENST00000529848 Q6ZVU0 165 aa6.93□□□□□ -1.3
SVIP-203ENST00000529848 ZFAND3Q9H8U3 227 aa6.93□□□□□ -1.3
SVIP-203ENST00000529848 A6NJY4 79 aa6.92□□□□□ -1.3
SVIP-203ENST00000529848 GFRA3O60609 400 aa6.92□□□□□ -1.3
SVIP-203ENST00000529848 PTGIRP43119 386 aa6.92□□□□□ -1.3
SVIP-203ENST00000529848 SMTNP53814 917 aa6.92□□□□□ -1.3
SVIP-203ENST00000529848 TLR1Q15399 786 aa6.92□□□□□ -1.3
SVIP-203ENST00000529848 SND1Q7KZF4 910 aaKnown RBP eCLIP6.92□□□□□ -1.3
SVIP-203ENST00000529848 SCG3Q8WXD2 468 aaKnown RBP6.92□□□□□ -1.3
SVIP-203ENST00000529848 CNKSR1Q969H4 720 aa6.92□□□□□ -1.3
SVIP-203ENST00000529848 VTI1AQ96AJ9 217 aa6.92□□□□□ -1.3
SVIP-203ENST00000529848 XAGE2Q96GT9 111 aa6.92□□□□□ -1.3
SVIP-203ENST00000529848 NLRP3Q96P20 1036 aa6.92□□□□□ -1.3
SVIP-203ENST00000529848 SLC4A9Q96Q91 983 aa6.92□□□□□ -1.3
SVIP-203ENST00000529848 MKNK1Q9BUB5 465 aa6.92□□□□□ -1.3
SVIP-203ENST00000529848 PDZRN3Q9UPQ7 1066 aa6.92□□□□□ -1.3
SVIP-203ENST00000529848 ATAD2Q6PL18 1390 aa6.92□□□□□ -1.3
SVIP-203ENST00000529848 A0A1W2PRU2 124 aa6.91□□□□□ -1.3
SVIP-203ENST00000529848 MEN1O00255 615 aa6.91□□□□□ -1.3
SVIP-203ENST00000529848 FOXO3O43524 673 aa6.91□□□□□ -1.3
SVIP-203ENST00000529848 PTCD1O75127 700 aaKnown RBP6.91□□□□□ -1.3
SVIP-203ENST00000529848 IL2RAP01589 272 aa6.91□□□□□ -1.3
SVIP-203ENST00000529848 RELBQ01201 579 aa6.91□□□□□ -1.3
SVIP-203ENST00000529848 FKBP5Q13451 457 aaPredicted RBP6.91□□□□□ -1.3
SVIP-203ENST00000529848 TAS1R3Q7RTX0 852 aa6.91□□□□□ -1.3
SVIP-203ENST00000529848 GAS2L2Q8NHY3 880 aa6.91□□□□□ -1.3
SVIP-203ENST00000529848 CHMP7Q8WUX9 453 aaPredicted RBP6.91□□□□□ -1.3
SVIP-203ENST00000529848 AGBL1Q96MI9 1066 aa6.91□□□□□ -1.3
SVIP-203ENST00000529848 ESYT1Q9BSJ8 1104 aa6.91□□□□□ -1.3
SVIP-203ENST00000529848 KLF16Q9BXK1 252 aaPredicted RBP6.91□□□□□ -1.3
SVIP-203ENST00000529848 IRX2Q9BZI1 471 aaPredicted RBP6.91□□□□□ -1.3
SVIP-203ENST00000529848 TSPAN10Q9H1Z9 355 aaPredicted RBP6.91□□□□□ -1.3
SVIP-203ENST00000529848 CHMP3Q9Y3E7 222 aa6.91□□□□□ -1.3
SVIP-203ENST00000529848 LCE2BO14633 110 aa6.9□□□□□ -1.3
SVIP-203ENST00000529848 PPP1R12BO60237 982 aaPredicted RBP6.9□□□□□ -1.3
SVIP-203ENST00000529848 ABL1P00519 1130 aa6.9□□□□□ -1.3
SVIP-203ENST00000529848 GTF2E1P29083 439 aaPredicted RBP6.9□□□□□ -1.3
SVIP-203ENST00000529848 SCNN1AP37088 669 aa6.9□□□□□ -1.3
SVIP-203ENST00000529848 SERPINB4P48594 390 aa6.9□□□□□ -1.3
SVIP-203ENST00000529848 EPHA4P54764 986 aa6.9□□□□□ -1.3
SVIP-203ENST00000529848 MFAP1P55081 439 aaKnown RBP6.9□□□□□ -1.3
SVIP-203ENST00000529848 CLN3Q13286 438 aa6.9□□□□□ -1.3
SVIP-203ENST00000529848 MTFR1Q15390 333 aa6.9□□□□□ -1.3
SVIP-203ENST00000529848 NBPF15Q8N660 670 aa6.9□□□□□ -1.3
SVIP-203ENST00000529848 HPS1Q92902 700 aa6.9□□□□□ -1.3
SVIP-203ENST00000529848 CCDC27Q2M243 656 aa6.89□□□□□ -1.31
SVIP-203ENST00000529848 SLC9A9Q8IVB4 645 aa6.89□□□□□ -1.31
SVIP-203ENST00000529848 MEIOBQ8N635 442 aa6.89□□□□□ -1.31
SVIP-203ENST00000529848 KDF1Q8NAX2 398 aaPredicted RBP6.89□□□□□ -1.31
SVIP-203ENST00000529848 ZNF395Q9H8N7 513 aaPredicted RBP6.89□□□□□ -1.31
SVIP-203ENST00000529848 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.89□□□□□ -1.311e-8■■■■■ 149.1
SVIP-203ENST00000529848 SCHIP1Q9P0W5 487 aaPredicted RBP6.89□□□□□ -1.31
SVIP-203ENST00000529848 SOWAHDA6NJG2 315 aa6.88□□□□□ -1.31
SVIP-203ENST00000529848 CAPN5O15484 640 aaPredicted RBP6.88□□□□□ -1.31
SVIP-203ENST00000529848 UPP2O95045 317 aa6.88□□□□□ -1.31
SVIP-203ENST00000529848 FOXK2Q01167 660 aa6.88□□□□□ -1.31
SVIP-203ENST00000529848 TBCELQ5QJ74 424 aa6.88□□□□□ -1.31
SVIP-203ENST00000529848 COL26A1Q96A83 441 aa6.88□□□□□ -1.31
SVIP-203ENST00000529848 EGFL7Q9UHF1 273 aa6.88□□□□□ -1.31
SVIP-203ENST00000529848 CDK2AP1O14519 115 aa6.87□□□□□ -1.31
SVIP-203ENST00000529848 C21orf2O43822 256 aa6.87□□□□□ -1.31
SVIP-203ENST00000529848 PSMA6P60900 246 aaKnown RBP6.87□□□□□ -1.31
SVIP-203ENST00000529848 CENPCQ03188 943 aa6.87□□□□□ -1.31
SVIP-203ENST00000529848 PURBQ96QR8 312 aaKnown RBP6.87□□□□□ -1.31
SVIP-203ENST00000529848 ZSCAN10Q96SZ4 725 aaPredicted RBP6.87□□□□□ -1.31
SVIP-203ENST00000529848 TSEN34Q9BSV6 310 aaKnown RBP6.87□□□□□ -1.31
SVIP-203ENST00000529848 SEPT3Q9UH03 358 aa6.87□□□□□ -1.31
SVIP-203ENST00000529848 HRH3Q9Y5N1 445 aa6.87□□□□□ -1.31
SVIP-203ENST00000529848 FAM187AA6NFU0 413 aa6.86□□□□□ -1.31
SVIP-203ENST00000529848 H3BRB1 525 aa6.86□□□□□ -1.31
SVIP-203ENST00000529848 NRG2O14511 850 aaPredicted RBP6.86□□□□□ -1.31
SVIP-203ENST00000529848 ZNF211Q13398 564 aaPredicted RBP6.86□□□□□ -1.31
SVIP-203ENST00000529848 NAA30Q147X3 362 aaPredicted RBP6.86□□□□□ -1.31
SVIP-203ENST00000529848 SLC27A3Q5K4L6 730 aa6.86□□□□□ -1.31
SVIP-203ENST00000529848 TMEM214Q6NUQ4 689 aaKnown RBP6.86□□□□□ -1.31
SVIP-203ENST00000529848 STAG2Q8N3U4 1231 aa6.86□□□□□ -1.31
SVIP-203ENST00000529848 GTF3C2Q8WUA4 911 aaPredicted RBP6.86□□□□□ -1.31
SVIP-203ENST00000529848 TUT1Q9H6E5 874 aaKnown RBP6.86□□□□□ -1.31
SVIP-203ENST00000529848 CABP1Q9NZU7 370 aa6.86□□□□□ -1.31
SVIP-203ENST00000529848 BIN2Q9UBW5 565 aaPredicted RBP6.86□□□□□ -1.31
SVIP-203ENST00000529848 GPC1P35052 558 aa6.85□□□□□ -1.31
SVIP-203ENST00000529848 GLYCTKQ8IVS8 523 aa6.85□□□□□ -1.31
SVIP-203ENST00000529848 LINC00528Q8N1L1 170 aa6.85□□□□□ -1.31
SVIP-203ENST00000529848 C2orf49Q9BVC5 232 aaPredicted RBP6.85□□□□□ -1.31
SVIP-203ENST00000529848 FHDC1Q9C0D6 1143 aaPredicted RBP6.85□□□□□ -1.31
SVIP-203ENST00000529848 POLMQ9NP87 494 aaPredicted RBP6.85□□□□□ -1.31
SVIP-203ENST00000529848 ANO2Q9NQ90 1003 aa6.85□□□□□ -1.31
SVIP-203ENST00000529848 ZNF232Q9UNY5 417 aa6.85□□□□□ -1.31
SVIP-203ENST00000529848 IQSEC3Q9UPP2 1182 aaPredicted RBP6.85□□□□□ -1.31
SVIP-203ENST00000529848 SERTM1A2A2V5 107 aa6.84□□□□□ -1.31
SVIP-203ENST00000529848 SF3B2Q13435 895 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms