RNA–Protein interactions for RNA: ENST00000529505.1

SMIM19-208, Transcript of small integral membrane protein 19, human

TSL 3

Gene SMIM19, Length 920 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMIM19-208	ENST00000529505	UBR3	Q6ZT12	1888 aa		28.1	■■■□□ 2.09
SMIM19-208	ENST00000529505	ZNF530	Q6P9A1	599 aa	Predicted RBP	28.09	■■■□□ 2.09
SMIM19-208	ENST00000529505	FLAD1	Q8NFF5	587 aa		28.09	■■■□□ 2.09
SMIM19-208	ENST00000529505	TMOD3	Q9NYL9	352 aa		28.09	■■■□□ 2.09
SMIM19-208	ENST00000529505	MSH5	O43196	834 aa		28.08	■■■□□ 2.09
SMIM19-208	ENST00000529505	DCAF5	Q96JK2	942 aa		28.08	■■■□□ 2.09
SMIM19-208	ENST00000529505	C1orf141	Q5JVX7	400 aa		28.07	■■■□□ 2.08
SMIM19-208	ENST00000529505	MYBBP1A	Q9BQG0	1328 aa	Known RBP	28.07	■■■□□ 2.08
SMIM19-208	ENST00000529505	LOC102724428	A0A0B4J2F2	783 aa		28.06	■■■□□ 2.08
SMIM19-208	ENST00000529505	ERVV-2	B6SEH9	535 aa		28.06	■■■□□ 2.08
SMIM19-208	ENST00000529505	FCHSD2	O94868	740 aa		28.06	■■■□□ 2.08
SMIM19-208	ENST00000529505	SIK1	P57059	783 aa		28.06	■■■□□ 2.08
SMIM19-208	ENST00000529505	AMIGO3	Q86WK7	504 aa		28.06	■■■□□ 2.08
SMIM19-208	ENST00000529505	KLHL34	Q8N239	644 aa		28.06	■■■□□ 2.08
SMIM19-208	ENST00000529505	PRKRIP1	Q9H875	184 aa	Predicted RBP	28.06	■■■□□ 2.08
SMIM19-208	ENST00000529505	U2AF1L5	P0DN76	240 aa	Predicted RBP	28.05	■■■□□ 2.08
SMIM19-208	ENST00000529505	U2AF1	Q01081	240 aa	Known RBP eCLIP	28.05	■■■□□ 2.08
SMIM19-208	ENST00000529505	ASAP1	Q9ULH1	1129 aa		28.05	■■■□□ 2.08
SMIM19-208	ENST00000529505	GOLGB1	Q14789	3259 aa	Known RBP	28.04	■■■□□ 2.08
SMIM19-208	ENST00000529505	AKAP4	Q5JQC9	854 aa		28.04	■■■□□ 2.08
SMIM19-208	ENST00000529505	MSL1	Q68DK7	614 aa		28.04	■■■□□ 2.08
SMIM19-208	ENST00000529505	NLGN2	Q8NFZ4	835 aa		28.04	■■■□□ 2.08
SMIM19-208	ENST00000529505	AK7	Q96M32	723 aa		28.04	■■■□□ 2.08
SMIM19-208	ENST00000529505	RSPH6A	Q9H0K4	717 aa		28.03	■■■□□ 2.08
SMIM19-208	ENST00000529505	MTHFSD	Q2M296	383 aa	Known RBP	28.02	■■■□□ 2.08
SMIM19-208	ENST00000529505	LINC00116	Q8NCU8	138 aa		28.02	■■■□□ 2.08
SMIM19-208	ENST00000529505	ATG3	Q9NT62	314 aa		28.01	■■■□□ 2.07
SMIM19-208	ENST00000529505	ITPK1	Q13572	414 aa		28	■■■□□ 2.07
SMIM19-208	ENST00000529505	GPR162	Q16538	588 aa		28	■■■□□ 2.07
SMIM19-208	ENST00000529505	ZNF831	Q5JPB2	1677 aa		28	■■■□□ 2.07
SMIM19-208	ENST00000529505	KDM6A	O15550	1401 aa	Predicted RBP	28	■■■□□ 2.07
SMIM19-208	ENST00000529505	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	27.99	■■■□□ 2.07
SMIM19-208	ENST00000529505	ZNF784	Q8NCA9	323 aa	Predicted RBP	27.99	■■■□□ 2.07
SMIM19-208	ENST00000529505	GAS2L2	Q8NHY3	880 aa		27.99	■■■□□ 2.07
SMIM19-208	ENST00000529505	SSFA2	P28290	1259 aa		27.98	■■■□□ 2.07
SMIM19-208	ENST00000529505	PRKAR2B	P31323	418 aa		27.98	■■■□□ 2.07
SMIM19-208	ENST00000529505	PHF14	O94880	888 aa		27.96	■■■□□ 2.07
SMIM19-208	ENST00000529505	ATP6V1A	P38606	617 aa		27.96	■■■□□ 2.07
SMIM19-208	ENST00000529505	SMIM5	Q71RC9	77 aa		27.96	■■■□□ 2.07
SMIM19-208	ENST00000529505	CABP4	P57796	275 aa		27.95	■■■□□ 2.06
SMIM19-208	ENST00000529505	PHACTR3	Q96KR7	559 aa		27.95	■■■□□ 2.06
SMIM19-208	ENST00000529505	PNN	Q9H307	717 aa	Known RBP	27.95	■■■□□ 2.06
SMIM19-208	ENST00000529505	CD2AP	Q9Y5K6	639 aa		27.94	■■■□□ 2.06
SMIM19-208	ENST00000529505	COL5A3	P25940	1745 aa	Predicted RBP	27.93	■■■□□ 2.06
SMIM19-208	ENST00000529505	SLC4A9	Q96Q91	983 aa		27.93	■■■□□ 2.06
SMIM19-208	ENST00000529505	GNPAT	O15228	680 aa		27.92	■■■□□ 2.06
SMIM19-208	ENST00000529505	GNAT3	A8MTJ3	354 aa		27.91	■■■□□ 2.06
SMIM19-208	ENST00000529505	RNMT	O43148	476 aa	Known RBP	27.91	■■■□□ 2.06
SMIM19-208	ENST00000529505	YBX3	P16989	372 aa	Known RBP eCLIP	27.91	■■■□□ 2.06
SMIM19-208	ENST00000529505	PELP1	Q8IZL8	1130 aa	Known RBP	27.91	■■■□□ 2.06
SMIM19-208	ENST00000529505	LGR6	Q9HBX8	967 aa		27.91	■■■□□ 2.06
SMIM19-208	ENST00000529505	NFATC2IP	Q8NCF5	419 aa		27.9	■■■□□ 2.06
SMIM19-208	ENST00000529505	NEFM	P07197	916 aa		27.89	■■■□□ 2.06
SMIM19-208	ENST00000529505	PLEKHF1	Q96S99	279 aa		27.88	■■■□□ 2.05
SMIM19-208	ENST00000529505	SLC52A2	Q9HAB3	445 aa		27.88	■■■□□ 2.05
SMIM19-208	ENST00000529505	SCN11A	Q9UI33	1791 aa		27.88	■■■□□ 2.05
SMIM19-208	ENST00000529505	GRIN3B	O60391	1043 aa		27.86	■■■□□ 2.05
SMIM19-208	ENST00000529505	RBM42	Q9BTD8	480 aa	Known RBP	27.86	■■■□□ 2.05
SMIM19-208	ENST00000529505	CIC	Q96RK0	1608 aa	Predicted RBP	27.85	■■■□□ 2.05
SMIM19-208	ENST00000529505	ANP32C	O43423	234 aa		27.85	■■■□□ 2.05
SMIM19-208	ENST00000529505	HTATSF1	O43719	755 aa	Known RBP	27.85	■■■□□ 2.05
SMIM19-208	ENST00000529505	RC3H1	Q5TC82	1133 aa	Known RBP	27.85	■■■□□ 2.05
SMIM19-208	ENST00000529505	IL17RE	Q8NFR9	667 aa		27.85	■■■□□ 2.05
SMIM19-208	ENST00000529505	MYH14	Q7Z406	1995 aa	Known RBP	27.85	■■■□□ 2.05
SMIM19-208	ENST00000529505	CNTNAP4	Q9C0A0	1308 aa		27.85	■■■□□ 2.05
SMIM19-208	ENST00000529505	RTCB	Q9Y3I0	505 aa	Known RBP	27.83	■■■□□ 2.05
SMIM19-208	ENST00000529505	ADRA2B	P18089	450 aa		27.81	■■■□□ 2.04
SMIM19-208	ENST00000529505	WDR43	Q15061	677 aa	Known RBP eCLIP	27.81	■■■□□ 2.04
SMIM19-208	ENST00000529505	TJP1	Q07157	1748 aa		27.81	■■■□□ 2.04
SMIM19-208	ENST00000529505	TRAPPC3L	Q5T215	181 aa		27.8	■■■□□ 2.04
SMIM19-208	ENST00000529505	RTF1	Q92541	710 aa	Known RBP	27.8	■■■□□ 2.04
SMIM19-208	ENST00000529505	CEMIP	Q8WUJ3	1361 aa		27.8	■■■□□ 2.04
SMIM19-208	ENST00000529505	MRC1	P22897	1456 aa		27.8	■■■□□ 2.04
SMIM19-208	ENST00000529505	ADAMTS7	Q9UKP4	1686 aa		27.8	■■■□□ 2.04
SMIM19-208	ENST00000529505	KIF13B	Q9NQT8	1826 aa		27.79	■■■□□ 2.04
SMIM19-208	ENST00000529505	C4A	P0C0L4	1744 aa		27.79	■■■□□ 2.04
SMIM19-208	ENST00000529505	VIRMA	Q69YN4	1812 aa	Known RBP	27.78	■■■□□ 2.04
SMIM19-208	ENST00000529505	MAPK8IP3	Q9UPT6	1336 aa		27.78	■■■□□ 2.04
SMIM19-208	ENST00000529505	RPS6KA4	O75676	772 aa		27.78	■■■□□ 2.04
SMIM19-208	ENST00000529505	TEF	Q10587	303 aa		27.78	■■■□□ 2.04
SMIM19-208	ENST00000529505	PTCD1	O75127	700 aa	Known RBP	27.77	■■■□□ 2.04
SMIM19-208	ENST00000529505	MMP10	P09238	476 aa		27.77	■■■□□ 2.04
SMIM19-208	ENST00000529505	NFE2L2	Q16236	605 aa		27.77	■■■□□ 2.04
SMIM19-208	ENST00000529505	ARHGEF1	Q92888	912 aa	Known RBP	27.77	■■■□□ 2.04
SMIM19-208	ENST00000529505	ADAMTS8	Q9UP79	889 aa		27.77	■■■□□ 2.04
SMIM19-208	ENST00000529505	NLGN1	Q8N2Q7	840 aa		27.75	■■■□□ 2.03
SMIM19-208	ENST00000529505	KIAA1551	Q9HCM1	1747 aa		27.75	■■■□□ 2.03
SMIM19-208	ENST00000529505	GYS1	P13807	737 aa		27.73	■■■□□ 2.03
SMIM19-208	ENST00000529505	CRKL	P46109	303 aa	Known RBP	27.73	■■■□□ 2.03
SMIM19-208	ENST00000529505	RUNDC1	Q96C34	613 aa		27.72	■■■□□ 2.03
SMIM19-208	ENST00000529505	C10orf71	Q711Q0	1435 aa		27.72	■■■□□ 2.03
SMIM19-208	ENST00000529505	PXDNL	A1KZ92	1463 aa		27.71	■■■□□ 2.03
SMIM19-208	ENST00000529505	RFC4	P35249	363 aa		27.71	■■■□□ 2.03
SMIM19-208	ENST00000529505	SLC39A6	Q13433	755 aa		27.7	■■■□□ 2.02
SMIM19-208	ENST00000529505	MCM10	Q7L590	875 aa		27.7	■■■□□ 2.02
SMIM19-208	ENST00000529505	VSIG10	Q8N0Z9	540 aa		27.7	■■■□□ 2.02
SMIM19-208	ENST00000529505	KCP	Q6ZWJ8	1503 aa		27.69	■■■□□ 2.02
SMIM19-208	ENST00000529505	TMPO	P42166	694 aa	Known RBP	27.68	■■■□□ 2.02
SMIM19-208	ENST00000529505	C1QTNF8	P60827	252 aa		27.68	■■■□□ 2.02
SMIM19-208	ENST00000529505	CCDC184	Q52MB2	194 aa		27.68	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms