RNA–Protein interactions for RNA: ENST00000529446.5

C9orf135-207, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 697 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-207ENST00000529446 SIPA1L3O60292 1781 aaPredicted RBP15.34■□□□□ 0.05
C9orf135-207ENST00000529446 GNAI1P63096 354 aa15.33■□□□□ 0.04
C9orf135-207ENST00000529446 SMARCC1Q92922 1105 aaPredicted RBP15.33■□□□□ 0.04
C9orf135-207ENST00000529446 CFAP44Q96MT7 982 aa15.33■□□□□ 0.04
C9orf135-207ENST00000529446 SALL2Q9Y467 1007 aaPredicted RBP15.33■□□□□ 0.04
C9orf135-207ENST00000529446 ITGB4P16144 1822 aa15.33■□□□□ 0.04
C9orf135-207ENST00000529446 VIRMAQ69YN4 1812 aaKnown RBP15.33■□□□□ 0.04
C9orf135-207ENST00000529446 BTBD11A6QL63 1104 aa15.32■□□□□ 0.04
C9orf135-207ENST00000529446 KCNQ2O43526 872 aa15.32■□□□□ 0.04
C9orf135-207ENST00000529446 THUMPD2Q9BTF0 503 aaKnown RBP15.32■□□□□ 0.04
C9orf135-207ENST00000529446 CHL1O00533 1208 aa15.31■□□□□ 0.04
C9orf135-207ENST00000529446 TRIM37O94972 964 aa15.31■□□□□ 0.04
C9orf135-207ENST00000529446 ZNF853P0CG23 659 aa15.31■□□□□ 0.04
C9orf135-207ENST00000529446 GOLGA2Q08379 1002 aa15.31■□□□□ 0.04
C9orf135-207ENST00000529446 PAPPAQ13219 1627 aa15.31■□□□□ 0.04
C9orf135-207ENST00000529446 E9PSI1 815 aa15.3■□□□□ 0.04
C9orf135-207ENST00000529446 HMGB2P26583 209 aaKnown RBP15.3■□□□□ 0.04
C9orf135-207ENST00000529446 SF3B2Q13435 895 aaKnown RBP15.3■□□□□ 0.04
C9orf135-207ENST00000529446 ZNF790Q6PG37 636 aa15.3■□□□□ 0.04
C9orf135-207ENST00000529446 TTC5Q8N0Z6 440 aa15.3■□□□□ 0.04
C9orf135-207ENST00000529446 MYH16Q9H6N6 1097 aa15.3■□□□□ 0.04
C9orf135-207ENST00000529446 TSPYL4Q9UJ04 414 aa15.3■□□□□ 0.04
C9orf135-207ENST00000529446 BTAF1O14981 1849 aa15.29■□□□□ 0.04
C9orf135-207ENST00000529446 SENP3-EIF4A1A0A087X0R7 540 aa15.29■□□□□ 0.04
C9orf135-207ENST00000529446 PLSCR1O15162 318 aa15.29■□□□□ 0.04
C9orf135-207ENST00000529446 ATG3Q9NT62 314 aa15.29■□□□□ 0.04
C9orf135-207ENST00000529446 TNS1Q9HBL0 1735 aaKnown RBP15.29■□□□□ 0.04
C9orf135-207ENST00000529446 KDM3BQ7LBC6 1761 aa15.28■□□□□ 0.04
C9orf135-207ENST00000529446 PALLDQ8WX93 1383 aa15.27■□□□□ 0.04
C9orf135-207ENST00000529446 RGPD3A6NKT7 1758 aaPredicted RBP15.27■□□□□ 0.04
C9orf135-207ENST00000529446 RGPD4Q7Z3J3 1758 aa15.27■□□□□ 0.04
C9orf135-207ENST00000529446 VSIG10Q8N0Z9 540 aa15.27■□□□□ 0.04
C9orf135-207ENST00000529446 ASAP1Q9ULH1 1129 aa15.27■□□□□ 0.04
C9orf135-207ENST00000529446 LAS1LQ9Y4W2 734 aaKnown RBP15.27■□□□□ 0.04
C9orf135-207ENST00000529446 EP400Q96L91 3159 aa15.26■□□□□ 0.03
C9orf135-207ENST00000529446 SOS1Q07889 1333 aaPredicted RBP15.26■□□□□ 0.03
C9orf135-207ENST00000529446 APBA3O96018 575 aa15.26■□□□□ 0.03
C9orf135-207ENST00000529446 ILDR2Q71H61 639 aa15.26■□□□□ 0.03
C9orf135-207ENST00000529446 PTF1AQ7RTS3 328 aa15.26■□□□□ 0.03
C9orf135-207ENST00000529446 FMNL2Q96PY5 1086 aa15.26■□□□□ 0.03
C9orf135-207ENST00000529446 MBIPQ9NS73 344 aa15.26■□□□□ 0.03
C9orf135-207ENST00000529446 UBR2Q8IWV8 1755 aa15.26■□□□□ 0.03
C9orf135-207ENST00000529446 ZNF831Q5JPB2 1677 aa15.25■□□□□ 0.03
C9orf135-207ENST00000529446 BAG6P46379 1132 aa15.25■□□□□ 0.03
C9orf135-207ENST00000529446 SLFN5Q08AF3 891 aa15.25■□□□□ 0.03
C9orf135-207ENST00000529446 SLC39A6Q13433 755 aa15.25■□□□□ 0.03
C9orf135-207ENST00000529446 SLC27A3Q5K4L6 730 aa15.25■□□□□ 0.03
C9orf135-207ENST00000529446 KCPQ6ZWJ8 1503 aa15.25■□□□□ 0.03
C9orf135-207ENST00000529446 FANCIQ9NVI1 1328 aa15.24■□□□□ 0.03
C9orf135-207ENST00000529446 EIF4A1P60842 406 aaKnown RBP15.24■□□□□ 0.03
C9orf135-207ENST00000529446 TRMT2AQ8IZ69 625 aaKnown RBP15.24■□□□□ 0.03
C9orf135-207ENST00000529446 TEX13AQ9BXU3 409 aaPredicted RBP15.24■□□□□ 0.03
C9orf135-207ENST00000529446 CHMP4AQ9BY43 222 aa15.24■□□□□ 0.03
C9orf135-207ENST00000529446 MIS18AQ9NYP9 233 aa15.24■□□□□ 0.03
C9orf135-207ENST00000529446 CICQ96RK0 1608 aaPredicted RBP15.24■□□□□ 0.03
C9orf135-207ENST00000529446 HEG1Q9ULI3 1381 aa15.24■□□□□ 0.03
C9orf135-207ENST00000529446 LY75O60449 1722 aa15.23■□□□□ 0.03
C9orf135-207ENST00000529446 LOC102724428A0A0B4J2F2 783 aa15.23■□□□□ 0.03
C9orf135-207ENST00000529446 HOXB7P09629 217 aa15.23■□□□□ 0.03
C9orf135-207ENST00000529446 SIK1P57059 783 aa15.23■□□□□ 0.03
C9orf135-207ENST00000529446 UPF1Q92900 1129 aaKnown RBP eCLIP15.23■□□□□ 0.03
C9orf135-207ENST00000529446 ZNF496Q96IT1 587 aaPredicted RBP15.23■□□□□ 0.03
C9orf135-207ENST00000529446 KAT6BQ8WYB5 2073 aa15.22■□□□□ 0.03
C9orf135-207ENST00000529446 PTCD1O75127 700 aaKnown RBP15.22■□□□□ 0.03
C9orf135-207ENST00000529446 SNRPA1P09661 255 aaKnown RBP15.22■□□□□ 0.03
C9orf135-207ENST00000529446 YTHDC1Q96MU7 727 aaKnown RBP15.22■□□□□ 0.03
C9orf135-207ENST00000529446 SPINK5Q9NQ38 1064 aaPredicted RBP15.22■□□□□ 0.03
C9orf135-207ENST00000529446 KCNQ3O43525 872 aa15.21■□□□□ 0.03
C9orf135-207ENST00000529446 TSR2Q969E8 191 aaKnown RBP15.21■□□□□ 0.03
C9orf135-207ENST00000529446 RBM42Q9BTD8 480 aaKnown RBP15.21■□□□□ 0.03
C9orf135-207ENST00000529446 ATP6V1AP38606 617 aa15.2■□□□□ 0.02
C9orf135-207ENST00000529446 CDCA7LQ96GN5 454 aa15.2■□□□□ 0.02
C9orf135-207ENST00000529446 CAMKK2Q96RR4 588 aa15.2■□□□□ 0.02
C9orf135-207ENST00000529446 CCNL1Q9UK58 526 aaPredicted RBP15.2■□□□□ 0.02
C9orf135-207ENST00000529446 GIGYF1O75420 1035 aaPredicted RBP15.19■□□□□ 0.02
C9orf135-207ENST00000529446 STARD3NLO95772 234 aa15.19■□□□□ 0.02
C9orf135-207ENST00000529446 CT47B1P0C2W7 299 aaPredicted RBP15.19■□□□□ 0.02
C9orf135-207ENST00000529446 TXNRD1Q16881 649 aa15.19■□□□□ 0.02
C9orf135-207ENST00000529446 DUSP27Q5VZP5 1158 aa15.19■□□□□ 0.02
C9orf135-207ENST00000529446 ZNF428Q96B54 188 aa15.18■□□□□ 0.02
C9orf135-207ENST00000529446 C5P01031 1676 aa15.18■□□□□ 0.02
C9orf135-207ENST00000529446 EN1Q05925 392 aaPredicted RBP15.17■□□□□ 0.02
C9orf135-207ENST00000529446 EXOSC9Q06265 439 aaKnown RBP15.17■□□□□ 0.02
C9orf135-207ENST00000529446 SLC4A9Q96Q91 983 aa15.17■□□□□ 0.02
C9orf135-207ENST00000529446 TJP1Q07157 1748 aa15.17■□□□□ 0.02
C9orf135-207ENST00000529446 ERBB4Q15303 1308 aa15.17■□□□□ 0.02
C9orf135-207ENST00000529446 LAMB4A4D0S4 1761 aa15.16■□□□□ 0.02
C9orf135-207ENST00000529446 TWISTNBQ3B726 338 aaPredicted RBP15.16■□□□□ 0.02
C9orf135-207ENST00000529446 RC3H1Q5TC82 1133 aaKnown RBP15.16■□□□□ 0.02
C9orf135-207ENST00000529446 DNAJC10Q8IXB1 793 aa15.16■□□□□ 0.02
C9orf135-207ENST00000529446 PROM2Q8N271 834 aa15.16■□□□□ 0.02
C9orf135-207ENST00000529446 C8orf58Q8NAV2 365 aa15.16■□□□□ 0.02
C9orf135-207ENST00000529446 RREB1Q92766 1687 aa15.16■□□□□ 0.02
C9orf135-207ENST00000529446 CYP19A1P11511 503 aaPredicted RBP15.15■□□□□ 0.02
C9orf135-207ENST00000529446 ITPK1Q13572 414 aa15.15■□□□□ 0.02
C9orf135-207ENST00000529446 EZH2Q15910 746 aaKnown RBP15.15■□□□□ 0.02
C9orf135-207ENST00000529446 DEFB132Q7Z7B7 95 aa15.15■□□□□ 0.02
C9orf135-207ENST00000529446 CNTNAP4Q9C0A0 1308 aa15.15■□□□□ 0.02
C9orf135-207ENST00000529446 HDGFL1Q5TGJ6 251 aa15.14■□□□□ 0.01
C9orf135-207ENST00000529446 LRRC4BQ9NT99 713 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms