RNA–Protein interactions for RNA: ENST00000529328.1

LINC00958-204, long intergenic non-protein coding RNA 958, humanhuman

TSL 3

Gene LINC00958, Length 580 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-204ENST00000529328 NBPF4Q96M43 638 aa8.51□□□□□ -1.05
LINC00958-204ENST00000529328 GGNBP2Q9H3C7 697 aa8.51□□□□□ -1.05
LINC00958-204ENST00000529328 ARFGEF1Q9Y6D6 1849 aa8.51□□□□□ -1.05
LINC00958-204ENST00000529328 MYH14Q7Z406 1995 aaKnown RBP8.5□□□□□ -1.05
LINC00958-204ENST00000529328 USHBP1Q8N6Y0 703 aa8.5□□□□□ -1.05
LINC00958-204ENST00000529328 RAPGEF4Q8WZA2 1011 aa8.5□□□□□ -1.05
LINC00958-204ENST00000529328 CCNL1Q9UK58 526 aaPredicted RBP8.5□□□□□ -1.05
LINC00958-204ENST00000529328 PALLDQ8WX93 1383 aa8.49□□□□□ -1.05
LINC00958-204ENST00000529328 CD44P16070 742 aaKnown RBP8.49□□□□□ -1.05
LINC00958-204ENST00000529328 TRIM26Q12899 539 aaPredicted RBP8.49□□□□□ -1.05
LINC00958-204ENST00000529328 ZNF784Q8NCA9 323 aaPredicted RBP8.49□□□□□ -1.05
LINC00958-204ENST00000529328 ADAMTS7Q9UKP4 1686 aa8.49□□□□□ -1.05
LINC00958-204ENST00000529328 UBR2Q8IWV8 1755 aa8.48□□□□□ -1.05
LINC00958-204ENST00000529328 DLEC1Q9Y238 1755 aa8.48□□□□□ -1.05
LINC00958-204ENST00000529328 TATP17735 454 aaPredicted RBP8.48□□□□□ -1.05
LINC00958-204ENST00000529328 POLD1P28340 1107 aa8.48□□□□□ -1.05
LINC00958-204ENST00000529328 KCNQ4P56696 695 aa8.48□□□□□ -1.05
LINC00958-204ENST00000529328 HSP90AB2PQ58FF8 381 aa8.48□□□□□ -1.05
LINC00958-204ENST00000529328 TFCP2L1Q9NZI6 479 aa8.48□□□□□ -1.05
LINC00958-204ENST00000529328 CLSPNQ9HAW4 1339 aa8.48□□□□□ -1.05
LINC00958-204ENST00000529328 CYP27B1O15528 508 aa8.47□□□□□ -1.05
LINC00958-204ENST00000529328 CARD14Q9BXL6 1004 aa8.47□□□□□ -1.05
LINC00958-204ENST00000529328 EMILIN1Q9Y6C2 1016 aa8.47□□□□□ -1.05
LINC00958-204ENST00000529328 SIPA1L3O60292 1781 aaPredicted RBP8.46□□□□□ -1.05
LINC00958-204ENST00000529328 MNX1P50219 401 aaPredicted RBP8.46□□□□□ -1.06
LINC00958-204ENST00000529328 COL23A1Q86Y22 540 aaPredicted RBP8.46□□□□□ -1.06
LINC00958-204ENST00000529328 NLGN2Q8NFZ4 835 aa8.46□□□□□ -1.06
LINC00958-204ENST00000529328 CEP350Q5VT06 3117 aa8.46□□□□□ -1.06
LINC00958-204ENST00000529328 KDRP35968 1356 aa8.46□□□□□ -1.06
LINC00958-204ENST00000529328 AFDNP55196 1824 aaKnown RBP8.45□□□□□ -1.06
LINC00958-204ENST00000529328 HMGB2P26583 209 aaKnown RBP8.45□□□□□ -1.06
LINC00958-204ENST00000529328 NKX1-1Q15270 411 aaPredicted RBP8.45□□□□□ -1.06
LINC00958-204ENST00000529328 KLHL34Q8N239 644 aa8.45□□□□□ -1.06
LINC00958-204ENST00000529328 TIMELESSQ9UNS1 1208 aa8.45□□□□□ -1.06
LINC00958-204ENST00000529328 WASHC2AQ641Q2 1341 aa8.45□□□□□ -1.06
LINC00958-204ENST00000529328 GPR162Q16538 588 aa8.44□□□□□ -1.06
LINC00958-204ENST00000529328 SBF1O95248 1867 aa8.44□□□□□ -1.06
LINC00958-204ENST00000529328 ADCY9O60503 1353 aa8.44□□□□□ -1.06
LINC00958-204ENST00000529328 MRC1P22897 1456 aa8.44□□□□□ -1.06
LINC00958-204ENST00000529328 NRXN2Q9P2S2 1712 aa8.43□□□□□ -1.06
LINC00958-204ENST00000529328 MSL1Q68DK7 614 aa8.43□□□□□ -1.06
LINC00958-204ENST00000529328 MPRIPQ6WCQ1 1025 aa8.43□□□□□ -1.06
LINC00958-204ENST00000529328 FLAD1Q8NFF5 587 aa8.43□□□□□ -1.06
LINC00958-204ENST00000529328 SMARCC1Q92922 1105 aaPredicted RBP8.43□□□□□ -1.06
LINC00958-204ENST00000529328 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.43□□□□□ -1.06
LINC00958-204ENST00000529328 SPG7Q9UQ90 795 aa8.43□□□□□ -1.06
LINC00958-204ENST00000529328 IGSF1Q8N6C5 1336 aa8.43□□□□□ -1.06
LINC00958-204ENST00000529328 KDM6AO15550 1401 aaPredicted RBP8.43□□□□□ -1.06
LINC00958-204ENST00000529328 SCN7AQ01118 1682 aa8.43□□□□□ -1.06
LINC00958-204ENST00000529328 GABBR2O75899 941 aa8.42□□□□□ -1.06
LINC00958-204ENST00000529328 YBX3P16989 372 aaKnown RBP eCLIP8.42□□□□□ -1.06
LINC00958-204ENST00000529328 AMIGO3Q86WK7 504 aa8.42□□□□□ -1.06
LINC00958-204ENST00000529328 PIGBQ92521 554 aa8.42□□□□□ -1.06
LINC00958-204ENST00000529328 EYA1Q99502 592 aa8.42□□□□□ -1.06
LINC00958-204ENST00000529328 POLKQ9UBT6 870 aa8.42□□□□□ -1.06
LINC00958-204ENST00000529328 TNRC6CQ9HCJ0 1690 aaKnown RBP8.42□□□□□ -1.06
LINC00958-204ENST00000529328 TIAM2Q8IVF5 1701 aa8.42□□□□□ -1.06
LINC00958-204ENST00000529328 CCDC88AQ3V6T2 1871 aa8.42□□□□□ -1.06
LINC00958-204ENST00000529328 CACNA1SQ13698 1873 aa8.41□□□□□ -1.06
LINC00958-204ENST00000529328 BCORQ6W2J9 1755 aa8.41□□□□□ -1.06
LINC00958-204ENST00000529328 PXDNLA1KZ92 1463 aa8.41□□□□□ -1.06
LINC00958-204ENST00000529328 C10orf71Q711Q0 1435 aa8.41□□□□□ -1.06
LINC00958-204ENST00000529328 ATP10DQ9P241 1426 aa8.41□□□□□ -1.06
LINC00958-204ENST00000529328 LOC102724428A0A0B4J2F2 783 aa8.41□□□□□ -1.06
LINC00958-204ENST00000529328 PHKG2P15735 406 aa8.41□□□□□ -1.06
LINC00958-204ENST00000529328 SSFA2P28290 1259 aa8.41□□□□□ -1.06
LINC00958-204ENST00000529328 SIK1P57059 783 aa8.41□□□□□ -1.06
LINC00958-204ENST00000529328 AK7Q96M32 723 aa8.41□□□□□ -1.06
LINC00958-204ENST00000529328 CD2APQ9Y5K6 639 aa8.41□□□□□ -1.06
LINC00958-204ENST00000529328 ARFGEF2Q9Y6D5 1785 aa8.4□□□□□ -1.06
LINC00958-204ENST00000529328 PPM1GO15355 546 aaPredicted RBP8.4□□□□□ -1.06
LINC00958-204ENST00000529328 GRIN3BO60391 1043 aa8.4□□□□□ -1.06
LINC00958-204ENST00000529328 C1QTNF8P60827 252 aa8.4□□□□□ -1.06
LINC00958-204ENST00000529328 EIF4A2Q14240 407 aaKnown RBP8.4□□□□□ -1.06
LINC00958-204ENST00000529328 IFNL2Q8IZJ0 200 aa8.4□□□□□ -1.06
LINC00958-204ENST00000529328 PELP1Q8IZL8 1130 aaKnown RBP8.4□□□□□ -1.06
LINC00958-204ENST00000529328 LINC00116Q8NCU8 138 aa8.4□□□□□ -1.06
LINC00958-204ENST00000529328 TMOD3Q9NYL9 352 aa8.4□□□□□ -1.06
LINC00958-204ENST00000529328 DICER1Q9UPY3 1922 aaKnown RBP8.39□□□□□ -1.07
LINC00958-204ENST00000529328 ANKRD31Q8N7Z5 1873 aa8.39□□□□□ -1.07
LINC00958-204ENST00000529328 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.39□□□□□ -1.07
LINC00958-204ENST00000529328 GIGYF1O75420 1035 aaPredicted RBP8.39□□□□□ -1.07
LINC00958-204ENST00000529328 WDR90Q96KV7 1748 aa8.39□□□□□ -1.07
LINC00958-204ENST00000529328 KCPQ6ZWJ8 1503 aa8.39□□□□□ -1.07
LINC00958-204ENST00000529328 COL11A2P13942 1736 aaPredicted RBP8.38□□□□□ -1.07
LINC00958-204ENST00000529328 SENP3-EIF4A1A0A087X0R7 540 aa8.38□□□□□ -1.07
LINC00958-204ENST00000529328 GNPATO15228 680 aa8.38□□□□□ -1.07
LINC00958-204ENST00000529328 PHF14O94880 888 aa8.38□□□□□ -1.07
LINC00958-204ENST00000529328 ITPK1Q13572 414 aa8.38□□□□□ -1.07
LINC00958-204ENST00000529328 ASAP1Q9ULH1 1129 aa8.38□□□□□ -1.07
LINC00958-204ENST00000529328 CNTNAP4Q9C0A0 1308 aa8.37□□□□□ -1.07
LINC00958-204ENST00000529328 ATG3Q9NT62 314 aa8.37□□□□□ -1.07
LINC00958-204ENST00000529328 LAMB4A4D0S4 1761 aa8.37□□□□□ -1.07
LINC00958-204ENST00000529328 COL3A1P02461 1466 aaPredicted RBP8.37□□□□□ -1.07
LINC00958-204ENST00000529328 DLG5Q8TDM6 1919 aa8.37□□□□□ -1.07
LINC00958-204ENST00000529328 HSP90AB1P08238 724 aaKnown RBP8.36□□□□□ -1.07
LINC00958-204ENST00000529328 HSPA5P11021 654 aaKnown RBP8.36□□□□□ -1.07
LINC00958-204ENST00000529328 ATP6V1AP38606 617 aa8.36□□□□□ -1.07
LINC00958-204ENST00000529328 TNNT2P45379 298 aaPredicted RBP8.36□□□□□ -1.07
LINC00958-204ENST00000529328 EIF4G2P78344 907 aaKnown RBP eCLIP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms