RNA–Protein interactions for RNA: ENST00000529011.1

TRIM29-211, Transcript of tripartite motif containing 29, humanhuman

TSL 4

Gene TRIM29, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-211ENST00000529011 GNAT3A8MTJ3 354 aa13.74□□□□□ -0.21
TRIM29-211ENST00000529011 ZBTB7AO95365 584 aa13.74□□□□□ -0.21
TRIM29-211ENST00000529011 ATP6V1AP38606 617 aa13.74□□□□□ -0.21
TRIM29-211ENST00000529011 RBM42Q9BTD8 480 aaKnown RBP13.74□□□□□ -0.21
TRIM29-211ENST00000529011 PRKRIP1Q9H875 184 aaPredicted RBP13.74□□□□□ -0.21
TRIM29-211ENST00000529011 KDM6AO15550 1401 aaPredicted RBP13.73□□□□□ -0.21
TRIM29-211ENST00000529011 RREB1Q92766 1687 aa13.73□□□□□ -0.21
TRIM29-211ENST00000529011 MYBBP1AQ9BQG0 1328 aaKnown RBP13.73□□□□□ -0.21
TRIM29-211ENST00000529011 HOXD11P31277 338 aaPredicted RBP13.73□□□□□ -0.21
TRIM29-211ENST00000529011 IL17REQ8NFR9 667 aa13.73□□□□□ -0.21
TRIM29-211ENST00000529011 SLC52A2Q9HAB3 445 aa13.73□□□□□ -0.21
TRIM29-211ENST00000529011 SPON1Q9HCB6 807 aa13.73□□□□□ -0.21
TRIM29-211ENST00000529011 ATF5Q9Y2D1 282 aaPredicted RBP13.73□□□□□ -0.21
TRIM29-211ENST00000529011 BTAF1O14981 1849 aa13.73□□□□□ -0.21
TRIM29-211ENST00000529011 DOT1LQ8TEK3 1739 aa13.73□□□□□ -0.21
TRIM29-211ENST00000529011 PTCD1O75127 700 aaKnown RBP13.72□□□□□ -0.21
TRIM29-211ENST00000529011 RGPD3A6NKT7 1758 aaPredicted RBP13.71□□□□□ -0.21
TRIM29-211ENST00000529011 RGPD4Q7Z3J3 1758 aa13.71□□□□□ -0.21
TRIM29-211ENST00000529011 NUP188Q5SRE5 1749 aa13.71□□□□□ -0.21
TRIM29-211ENST00000529011 MYCNP04198 464 aaPredicted RBP13.71□□□□□ -0.21
TRIM29-211ENST00000529011 ITPK1Q13572 414 aa13.71□□□□□ -0.21
TRIM29-211ENST00000529011 SLC4A9Q96Q91 983 aa13.71□□□□□ -0.21
TRIM29-211ENST00000529011 NEFMP07197 916 aa13.7□□□□□ -0.22
TRIM29-211ENST00000529011 SLC39A6Q13433 755 aa13.7□□□□□ -0.22
TRIM29-211ENST00000529011 LINC00116Q8NCU8 138 aa13.7□□□□□ -0.22
TRIM29-211ENST00000529011 MTFR1LQ9H019 292 aa13.7□□□□□ -0.22
TRIM29-211ENST00000529011 PNNQ9H307 717 aaKnown RBP13.7□□□□□ -0.22
TRIM29-211ENST00000529011 PNPLA7Q6ZV29 1317 aa13.69□□□□□ -0.22
TRIM29-211ENST00000529011 TEFQ10587 303 aa13.69□□□□□ -0.22
TRIM29-211ENST00000529011 COL23A1Q86Y22 540 aaPredicted RBP13.69□□□□□ -0.22
TRIM29-211ENST00000529011 RTF1Q92541 710 aaKnown RBP13.69□□□□□ -0.22
TRIM29-211ENST00000529011 AK7Q96M32 723 aa13.69□□□□□ -0.22
TRIM29-211ENST00000529011 PLEKHF1Q96S99 279 aa13.69□□□□□ -0.22
TRIM29-211ENST00000529011 SMIM5Q71RC9 77 aa13.68□□□□□ -0.22
TRIM29-211ENST00000529011 SLC16A10Q8TF71 515 aa13.68□□□□□ -0.22
TRIM29-211ENST00000529011 PPP1R1BQ9UD71 204 aaPredicted RBP13.68□□□□□ -0.22
TRIM29-211ENST00000529011 MAP3K5Q99683 1374 aa13.68□□□□□ -0.22
TRIM29-211ENST00000529011 TOGARAM1Q9Y4F4 1720 aa13.67□□□□□ -0.22
TRIM29-211ENST00000529011 PTGER2P43116 358 aa13.67□□□□□ -0.22
TRIM29-211ENST00000529011 MCM10Q7L590 875 aa13.67□□□□□ -0.22
TRIM29-211ENST00000529011 FLAD1Q8NFF5 587 aa13.67□□□□□ -0.22
TRIM29-211ENST00000529011 HTATSF1O43719 755 aaKnown RBP13.66□□□□□ -0.22
TRIM29-211ENST00000529011 PHF14O94880 888 aa13.66□□□□□ -0.22
TRIM29-211ENST00000529011 DCTN1Q14203 1278 aa13.66□□□□□ -0.22
TRIM29-211ENST00000529011 AMIGO3Q86WK7 504 aa13.66□□□□□ -0.22
TRIM29-211ENST00000529011 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.65□□□□□ -0.22
TRIM29-211ENST00000529011 GNPATO15228 680 aa13.65□□□□□ -0.22
TRIM29-211ENST00000529011 WDR43Q15061 677 aaKnown RBP eCLIP13.65□□□□□ -0.22
TRIM29-211ENST00000529011 RC3H1Q5TC82 1133 aaKnown RBP13.65□□□□□ -0.22
TRIM29-211ENST00000529011 TTC5Q8N0Z6 440 aa13.65□□□□□ -0.22
TRIM29-211ENST00000529011 ADAMTS8Q9UP79 889 aa13.65□□□□□ -0.22
TRIM29-211ENST00000529011 MAPK8IP3Q9UPT6 1336 aa13.64□□□□□ -0.23
TRIM29-211ENST00000529011 SRCAPQ6ZRS2 3230 aa13.64□□□□□ -0.23
TRIM29-211ENST00000529011 BTBD11A6QL63 1104 aa13.64□□□□□ -0.23
TRIM29-211ENST00000529011 NFE2L2Q16236 605 aa13.64□□□□□ -0.23
TRIM29-211ENST00000529011 ZNF790Q6PG37 636 aa13.64□□□□□ -0.23
TRIM29-211ENST00000529011 DNAJC10Q8IXB1 793 aa13.64□□□□□ -0.23
TRIM29-211ENST00000529011 SGIP1Q9BQI5 828 aa13.64□□□□□ -0.23
TRIM29-211ENST00000529011 ITGB4P16144 1822 aa13.64□□□□□ -0.23
TRIM29-211ENST00000529011 PAPPAQ13219 1627 aa13.64□□□□□ -0.23
TRIM29-211ENST00000529011 CEMIPQ8WUJ3 1361 aa13.63□□□□□ -0.23
TRIM29-211ENST00000529011 ANP32CO43423 234 aa13.63□□□□□ -0.23
TRIM29-211ENST00000529011 SSFA2P28290 1259 aa13.63□□□□□ -0.23
TRIM29-211ENST00000529011 TRAPPC3LQ5T215 181 aa13.63□□□□□ -0.23
TRIM29-211ENST00000529011 CCDC146Q8IYE0 955 aa13.63□□□□□ -0.23
TRIM29-211ENST00000529011 RTCBQ9Y3I0 505 aaKnown RBP13.63□□□□□ -0.23
TRIM29-211ENST00000529011 LY75O60449 1722 aa13.63□□□□□ -0.23
TRIM29-211ENST00000529011 KCNQ3O43525 872 aa13.62□□□□□ -0.23
TRIM29-211ENST00000529011 RPS6KA4O75676 772 aa13.62□□□□□ -0.23
TRIM29-211ENST00000529011 POLD1P28340 1107 aa13.62□□□□□ -0.23
TRIM29-211ENST00000529011 RIPK4P57078 832 aa13.62□□□□□ -0.23
TRIM29-211ENST00000529011 TAF7Q15545 349 aaPredicted RBP13.62□□□□□ -0.23
TRIM29-211ENST00000529011 VSIG10Q8N0Z9 540 aa13.62□□□□□ -0.23
TRIM29-211ENST00000529011 ZNF496Q96IT1 587 aaPredicted RBP13.62□□□□□ -0.23
TRIM29-211ENST00000529011 ARXQ96QS3 562 aa13.62□□□□□ -0.23
TRIM29-211ENST00000529011 CRKLP46109 303 aaKnown RBP13.61□□□□□ -0.23
TRIM29-211ENST00000529011 CCDC184Q52MB2 194 aa13.61□□□□□ -0.23
TRIM29-211ENST00000529011 MSL1Q68DK7 614 aa13.61□□□□□ -0.23
TRIM29-211ENST00000529011 INTS5Q6P9B9 1019 aaKnown RBP13.61□□□□□ -0.23
TRIM29-211ENST00000529011 ARHGEF1Q92888 912 aaKnown RBP13.61□□□□□ -0.23
TRIM29-211ENST00000529011 MIS18AQ9NYP9 233 aa13.61□□□□□ -0.23
TRIM29-211ENST00000529011 CNTNAP4Q9C0A0 1308 aa13.61□□□□□ -0.23
TRIM29-211ENST00000529011 CYP19A1P11511 503 aaPredicted RBP13.6□□□□□ -0.23
TRIM29-211ENST00000529011 TMPOP42166 694 aaKnown RBP13.6□□□□□ -0.23
TRIM29-211ENST00000529011 NEUROD2Q15784 382 aa13.6□□□□□ -0.23
TRIM29-211ENST00000529011 RUNDC1Q96C34 613 aa13.6□□□□□ -0.23
TRIM29-211ENST00000529011 THUMPD2Q9BTF0 503 aaKnown RBP13.6□□□□□ -0.23
TRIM29-211ENST00000529011 STARD3NLO95772 234 aa13.59□□□□□ -0.23
TRIM29-211ENST00000529011 RFC4P35249 363 aa13.59□□□□□ -0.23
TRIM29-211ENST00000529011 FMNL2Q96PY5 1086 aa13.59□□□□□ -0.23
TRIM29-211ENST00000529011 TEX13AQ9BXU3 409 aaPredicted RBP13.59□□□□□ -0.23
TRIM29-211ENST00000529011 FHDC1Q9C0D6 1143 aaPredicted RBP13.59□□□□□ -0.23
TRIM29-211ENST00000529011 RRP7AQ9Y3A4 280 aaKnown RBP13.59□□□□□ -0.23
TRIM29-211ENST00000529011 SYT17Q9BSW7 474 aa13.58□□□□□ -0.24
TRIM29-211ENST00000529011 CCDC87Q9NVE4 849 aa13.58□□□□□ -0.24
TRIM29-211ENST00000529011 MRC1P22897 1456 aa13.58□□□□□ -0.24
TRIM29-211ENST00000529011 LRP5O75197 1615 aa13.57□□□□□ -0.24
TRIM29-211ENST00000529011 PNISRQ8TF01 805 aaKnown RBP13.57□□□□□ -0.24
TRIM29-211ENST00000529011 CASZ1Q86V15 1759 aa13.57□□□□□ -0.24
TRIM29-211ENST00000529011 HEG1Q9ULI3 1381 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms