RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-213ENST00000528999 LTN1O94822 1766 aa13.26□□□□□ -0.29
PUF60-213ENST00000528999 FKBP5Q13451 457 aaPredicted RBP13.26□□□□□ -0.29
PUF60-213ENST00000528999 ORAI2Q96SN7 254 aa13.26□□□□□ -0.29
PUF60-213ENST00000528999 ATF3P18847 181 aa13.25□□□□□ -0.29
PUF60-213ENST00000528999 TEFQ10587 303 aa13.25□□□□□ -0.29
PUF60-213ENST00000528999 C1orf141Q5JVX7 400 aa13.25□□□□□ -0.29
PUF60-213ENST00000528999 HDGFL1Q5TGJ6 251 aa13.25□□□□□ -0.29
PUF60-213ENST00000528999 SLC4A10Q6U841 1118 aa13.25□□□□□ -0.29
PUF60-213ENST00000528999 TBC1D9Q6ZT07 1266 aa13.25□□□□□ -0.29
PUF60-213ENST00000528999 HSCBQ8IWL3 235 aa13.25□□□□□ -0.29
PUF60-213ENST00000528999 SRCIN1Q9C0H9 1055 aa13.25□□□□□ -0.29
PUF60-213ENST00000528999 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.25□□□□□ -0.29
PUF60-213ENST00000528999 IBTKQ9P2D0 1353 aaPredicted RBP13.24□□□□□ -0.29
PUF60-213ENST00000528999 ZNF530Q6P9A1 599 aaPredicted RBP13.24□□□□□ -0.29
PUF60-213ENST00000528999 ANKRD24Q8TF21 1146 aa13.24□□□□□ -0.29
PUF60-213ENST00000528999 CHMP5Q9NZZ3 219 aa13.24□□□□□ -0.29
PUF60-213ENST00000528999 TRPM3Q9HCF6 1732 aaPredicted RBP13.23□□□□□ -0.29
PUF60-213ENST00000528999 RNMTO43148 476 aaKnown RBP13.23□□□□□ -0.29
PUF60-213ENST00000528999 RAB11FIP3O75154 756 aa13.23□□□□□ -0.29
PUF60-213ENST00000528999 CADPS2Q86UW7 1296 aa13.23□□□□□ -0.29
PUF60-213ENST00000528999 CIZ1Q9ULV3 898 aaPredicted RBP13.23□□□□□ -0.29
PUF60-213ENST00000528999 LMO7Q8WWI1 1683 aa13.23□□□□□ -0.29
PUF60-213ENST00000528999 ABCC6O95255 1503 aa13.23□□□□□ -0.29
PUF60-213ENST00000528999 AOX1Q06278 1338 aa13.22□□□□□ -0.29
PUF60-213ENST00000528999 BTBD11A6QL63 1104 aa13.22□□□□□ -0.29
PUF60-213ENST00000528999 F6X3S4 739 aa13.22□□□□□ -0.29
PUF60-213ENST00000528999 USHBP1Q8N6Y0 703 aa13.22□□□□□ -0.29
PUF60-213ENST00000528999 DBF4Q9UBU7 674 aaPredicted RBP13.22□□□□□ -0.29
PUF60-213ENST00000528999 CAMTA1Q9Y6Y1 1673 aa13.21□□□□□ -0.29
PUF60-213ENST00000528999 HEG1Q9ULI3 1381 aa13.21□□□□□ -0.29
PUF60-213ENST00000528999 EPB41L2O43491 1005 aaKnown RBP13.21□□□□□ -0.29
PUF60-213ENST00000528999 GSPT1P15170 499 aaKnown RBP13.21□□□□□ -0.29
PUF60-213ENST00000528999 GSE1Q14687 1217 aa13.21□□□□□ -0.29
PUF60-213ENST00000528999 RBM33Q96EV2 1170 aaKnown RBP13.21□□□□□ -0.29
PUF60-213ENST00000528999 LRRCC1Q9C099 1032 aa13.21□□□□□ -0.29
PUF60-213ENST00000528999 USP44Q9H0E7 712 aa13.21□□□□□ -0.29
PUF60-213ENST00000528999 LGR6Q9HBX8 967 aa13.21□□□□□ -0.29
PUF60-213ENST00000528999 STAP2Q9UGK3 403 aa13.21□□□□□ -0.29
PUF60-213ENST00000528999 N4BP2Q86UW6 1770 aaPredicted RBP13.2□□□□□ -0.3
PUF60-213ENST00000528999 NPHP3Q7Z494 1330 aa13.2□□□□□ -0.3
PUF60-213ENST00000528999 ALDH1L1O75891 902 aa13.2□□□□□ -0.3
PUF60-213ENST00000528999 REC8O95072 547 aa13.2□□□□□ -0.3
PUF60-213ENST00000528999 UBTFL1P0CB47 393 aaPredicted RBP13.2□□□□□ -0.3
PUF60-213ENST00000528999 HSP90AB4PQ58FF6 505 aa13.2□□□□□ -0.3
PUF60-213ENST00000528999 SSH3Q8TE77 659 aa13.2□□□□□ -0.3
PUF60-213ENST00000528999 FAM208AQ9UK61 1670 aaKnown RBP13.2□□□□□ -0.3
PUF60-213ENST00000528999 FRAT2O75474 233 aaPredicted RBP13.19□□□□□ -0.3
PUF60-213ENST00000528999 PDE1AP54750 535 aa13.19□□□□□ -0.3
PUF60-213ENST00000528999 RABEP1Q15276 862 aa13.19□□□□□ -0.3
PUF60-213ENST00000528999 C16orf71Q8IYS4 520 aaPredicted RBP13.19□□□□□ -0.3
PUF60-213ENST00000528999 KIF2CQ99661 725 aa13.19□□□□□ -0.3
PUF60-213ENST00000528999 HYPKQ9NX55 129 aa13.19□□□□□ -0.3
PUF60-213ENST00000528999 SPG7Q9UQ90 795 aa13.19□□□□□ -0.3
PUF60-213ENST00000528999 KDM3BQ7LBC6 1761 aa13.19□□□□□ -0.3
PUF60-213ENST00000528999 GIGYF1O75420 1035 aaPredicted RBP13.18□□□□□ -0.3
PUF60-213ENST00000528999 SDSP20132 328 aa13.18□□□□□ -0.3
PUF60-213ENST00000528999 PTMSP20962 102 aa13.18□□□□□ -0.3
PUF60-213ENST00000528999 POLA2Q14181 598 aa13.18□□□□□ -0.3
PUF60-213ENST00000528999 DNAAF4Q8WXU2 420 aa13.18□□□□□ -0.3
PUF60-213ENST00000528999 LRRC59Q96AG4 307 aaKnown RBP13.18□□□□□ -0.3
PUF60-213ENST00000528999 USP26Q9BXU7 913 aa13.18□□□□□ -0.3
PUF60-213ENST00000528999 TMEM94Q12767 1356 aa13.18□□□□□ -0.3
PUF60-213ENST00000528999 ERBB3P21860 1342 aa13.17□□□□□ -0.3
PUF60-213ENST00000528999 SALL3Q9BXA9 1300 aa13.17□□□□□ -0.3
PUF60-213ENST00000528999 DDIT3P35638 169 aa13.17□□□□□ -0.3
PUF60-213ENST00000528999 BEND3Q5T5X7 828 aa13.17□□□□□ -0.3
PUF60-213ENST00000528999 LMOD2Q6P5Q4 547 aa13.17□□□□□ -0.3
PUF60-213ENST00000528999 RAPGEF4Q8WZA2 1011 aa13.17□□□□□ -0.3
PUF60-213ENST00000528999 AXIN2Q9Y2T1 843 aa13.17□□□□□ -0.3
PUF60-213ENST00000528999 ALS2Q96Q42 1657 aa13.17□□□□□ -0.3
PUF60-213ENST00000528999 ADAMTS7Q9UKP4 1686 aa13.16□□□□□ -0.3
PUF60-213ENST00000528999 ERC2O15083 957 aa13.16□□□□□ -0.3
PUF60-213ENST00000528999 DDX58O95786 925 aaKnown RBP13.16□□□□□ -0.3
PUF60-213ENST00000528999 HSP90AB1P08238 724 aaKnown RBP13.16□□□□□ -0.3
PUF60-213ENST00000528999 TATP17735 454 aaPredicted RBP13.16□□□□□ -0.3
PUF60-213ENST00000528999 MTX1Q13505 466 aa13.16□□□□□ -0.3
PUF60-213ENST00000528999 KSR2Q6VAB6 950 aa13.16□□□□□ -0.3
PUF60-213ENST00000528999 MPRIPQ6WCQ1 1025 aa13.16□□□□□ -0.3
PUF60-213ENST00000528999 SLKQ9H2G2 1235 aaPredicted RBP13.16□□□□□ -0.3
PUF60-213ENST00000528999 LRRFIP2Q9Y608 721 aaKnown RBP13.16□□□□□ -0.3
PUF60-213ENST00000528999 CPDO75976 1380 aa13.16□□□□□ -0.3
PUF60-213ENST00000528999 ZBTB7CA1YPR0 619 aa13.15□□□□□ -0.3
PUF60-213ENST00000528999 K7ELQ4 463 aaPredicted RBP13.15□□□□□ -0.3
PUF60-213ENST00000528999 EIF2S2P20042 333 aaKnown RBP13.15□□□□□ -0.3
PUF60-213ENST00000528999 PHAXQ9H814 394 aaKnown RBP13.15□□□□□ -0.3
PUF60-213ENST00000528999 DDX21Q9NR30 783 aaKnown RBP eCLIP13.15□□□□□ -0.3
PUF60-213ENST00000528999 SMARCA5O60264 1052 aaPredicted RBP13.14□□□□□ -0.31
PUF60-213ENST00000528999 MX1P20591 662 aa13.14□□□□□ -0.31
PUF60-213ENST00000528999 XPCQ01831 940 aaPredicted RBP13.14□□□□□ -0.31
PUF60-213ENST00000528999 IFNL2Q8IZJ0 200 aa13.14□□□□□ -0.31
PUF60-213ENST00000528999 NECTIN2Q92692 538 aa13.14□□□□□ -0.31
PUF60-213ENST00000528999 KIF1BPQ96EK5 621 aa13.14□□□□□ -0.31
PUF60-213ENST00000528999 IL17RAQ96F46 866 aa13.14□□□□□ -0.31
PUF60-213ENST00000528999 CHPF2Q9P2E5 772 aa13.14□□□□□ -0.31
PUF60-213ENST00000528999 SPATA31A3Q5VYP0 1347 aa13.13□□□□□ -0.31
PUF60-213ENST00000528999 PNMA6EA0A0J9YXQ4 647 aa13.13□□□□□ -0.31
PUF60-213ENST00000528999 PI4KAP2A4QPH2 592 aa13.13□□□□□ -0.31
PUF60-213ENST00000528999 MCM4P33991 863 aa13.13□□□□□ -0.31
PUF60-213ENST00000528999 PI4KAP1Q8N8J0 262 aa13.13□□□□□ -0.31
PUF60-213ENST00000528999 TNS3Q68CZ2 1445 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms