RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 CABP4P57796 275 aa18.92■□□□□ 0.62
UBXN1-209ENST00000528907 TMOD3Q9NYL9 352 aa18.92■□□□□ 0.62
UBXN1-209ENST00000528907 LY75O60449 1722 aa18.91■□□□□ 0.62
UBXN1-209ENST00000528907 MCM10Q7L590 875 aa18.91■□□□□ 0.62
UBXN1-209ENST00000528907 PIGBQ92521 554 aa18.91■□□□□ 0.62
UBXN1-209ENST00000528907 RRP7AQ9Y3A4 280 aaKnown RBP18.91■□□□□ 0.62
UBXN1-209ENST00000528907 ZNF831Q5JPB2 1677 aa18.91■□□□□ 0.62
UBXN1-209ENST00000528907 PLSCR1O15162 318 aa18.9■□□□□ 0.62
UBXN1-209ENST00000528907 NFATC2IPQ8NCF5 419 aa18.9■□□□□ 0.62
UBXN1-209ENST00000528907 BABAM1Q9NWV8 329 aa18.9■□□□□ 0.62
UBXN1-209ENST00000528907 UBR2Q8IWV8 1755 aa18.9■□□□□ 0.62
UBXN1-209ENST00000528907 KDM3BQ7LBC6 1761 aa18.89■□□□□ 0.61
UBXN1-209ENST00000528907 TEFQ10587 303 aa18.89■□□□□ 0.61
UBXN1-209ENST00000528907 DCTN1Q14203 1278 aa18.89■□□□□ 0.61
UBXN1-209ENST00000528907 NEUROD2Q15784 382 aa18.89■□□□□ 0.61
UBXN1-209ENST00000528907 PTF1AQ7RTS3 328 aa18.89■□□□□ 0.61
UBXN1-209ENST00000528907 KAT6BQ8WYB5 2073 aa18.89■□□□□ 0.61
UBXN1-209ENST00000528907 CICQ96RK0 1608 aaPredicted RBP18.89■□□□□ 0.61
UBXN1-209ENST00000528907 CALD1Q05682 793 aaKnown RBP18.88■□□□□ 0.61
UBXN1-209ENST00000528907 SYTL4Q96C24 671 aaPredicted RBP18.88■□□□□ 0.61
UBXN1-209ENST00000528907 TAF7Q15545 349 aaPredicted RBP18.87■□□□□ 0.61
UBXN1-209ENST00000528907 WWC1Q8IX03 1113 aa18.87■□□□□ 0.61
UBXN1-209ENST00000528907 SMARCC1Q92922 1105 aaPredicted RBP18.87■□□□□ 0.61
UBXN1-209ENST00000528907 ZNF521Q96K83 1311 aa18.86■□□□□ 0.61
UBXN1-209ENST00000528907 IL16Q14005 1332 aa18.85■□□□□ 0.61
UBXN1-209ENST00000528907 APBA3O96018 575 aa18.85■□□□□ 0.61
UBXN1-209ENST00000528907 WDR63Q8IWG1 891 aa18.85■□□□□ 0.61
UBXN1-209ENST00000528907 ATG3Q9NT62 314 aa18.85■□□□□ 0.61
UBXN1-209ENST00000528907 RREB1Q92766 1687 aa18.85■□□□□ 0.61
UBXN1-209ENST00000528907 THUMPD2Q9BTF0 503 aaKnown RBP18.84■□□□□ 0.61
UBXN1-209ENST00000528907 KCPQ6ZWJ8 1503 aa18.84■□□□□ 0.61
UBXN1-209ENST00000528907 PALLDQ8WX93 1383 aa18.83■□□□□ 0.61
UBXN1-209ENST00000528907 BTBD11A6QL63 1104 aa18.83■□□□□ 0.6
UBXN1-209ENST00000528907 ZNF853P0CG23 659 aa18.83■□□□□ 0.6
UBXN1-209ENST00000528907 CFAP44Q96MT7 982 aa18.83■□□□□ 0.6
UBXN1-209ENST00000528907 CHL1O00533 1208 aa18.82■□□□□ 0.6
UBXN1-209ENST00000528907 EN1Q05925 392 aaPredicted RBP18.82■□□□□ 0.6
UBXN1-209ENST00000528907 ZNF790Q6PG37 636 aa18.82■□□□□ 0.6
UBXN1-209ENST00000528907 IFT57Q9NWB7 429 aa18.82■□□□□ 0.6
UBXN1-209ENST00000528907 ASAP1Q9ULH1 1129 aa18.82■□□□□ 0.6
UBXN1-209ENST00000528907 HMGB2P26583 209 aaKnown RBP18.81■□□□□ 0.6
UBXN1-209ENST00000528907 R3HDM1Q15032 1099 aaKnown RBP18.81■□□□□ 0.6
UBXN1-209ENST00000528907 CAMKK2Q96RR4 588 aa18.81■□□□□ 0.6
UBXN1-209ENST00000528907 GNAI1P63096 354 aa18.8■□□□□ 0.6
UBXN1-209ENST00000528907 SLC27A3Q5K4L6 730 aa18.8■□□□□ 0.6
UBXN1-209ENST00000528907 VSIG10Q8N0Z9 540 aa18.8■□□□□ 0.6
UBXN1-209ENST00000528907 HEG1Q9ULI3 1381 aa18.8■□□□□ 0.6
UBXN1-209ENST00000528907 TAF1LQ8IZX4 1826 aa18.79■□□□□ 0.6
UBXN1-209ENST00000528907 TJP1Q07157 1748 aa18.79■□□□□ 0.6
UBXN1-209ENST00000528907 COL5A3P25940 1745 aaPredicted RBP18.78■□□□□ 0.6
UBXN1-209ENST00000528907 NUP188Q5SRE5 1749 aa18.78■□□□□ 0.6
UBXN1-209ENST00000528907 SLC39A6Q13433 755 aa18.78■□□□□ 0.6
UBXN1-209ENST00000528907 TTC5Q8N0Z6 440 aa18.78■□□□□ 0.6
UBXN1-209ENST00000528907 C5P01031 1676 aa18.78■□□□□ 0.6
UBXN1-209ENST00000528907 LOC102724428A0A0B4J2F2 783 aa18.77■□□□□ 0.6
UBXN1-209ENST00000528907 SIK1P57059 783 aa18.77■□□□□ 0.6
UBXN1-209ENST00000528907 TXNRD1Q16881 649 aa18.77■□□□□ 0.6
UBXN1-209ENST00000528907 PROM2Q8N271 834 aa18.77■□□□□ 0.6
UBXN1-209ENST00000528907 TSPYL4Q9UJ04 414 aa18.77■□□□□ 0.6
UBXN1-209ENST00000528907 HNRNPUQ00839 825 aaKnown RBP eCLIP18.76■□□□□ 0.59
UBXN1-209ENST00000528907 FMNL2Q96PY5 1086 aa18.76■□□□□ 0.59
UBXN1-209ENST00000528907 SALL2Q9Y467 1007 aaPredicted RBP18.76■□□□□ 0.59
UBXN1-209ENST00000528907 LAMB4A4D0S4 1761 aa18.76■□□□□ 0.59
UBXN1-209ENST00000528907 ZBED9Q6R2W3 1325 aa18.75■□□□□ 0.59
UBXN1-209ENST00000528907 KCNQ3O43525 872 aa18.75■□□□□ 0.59
UBXN1-209ENST00000528907 YY1P25490 414 aa18.75■□□□□ 0.59
UBXN1-209ENST00000528907 EIF4A1P60842 406 aaKnown RBP18.75■□□□□ 0.59
UBXN1-209ENST00000528907 EZH2Q15910 746 aaKnown RBP18.75■□□□□ 0.59
UBXN1-209ENST00000528907 ZNF496Q96IT1 587 aaPredicted RBP18.75■□□□□ 0.59
UBXN1-209ENST00000528907 SLC4A9Q96Q91 983 aa18.75■□□□□ 0.59
UBXN1-209ENST00000528907 SENP3-EIF4A1A0A087X0R7 540 aa18.74■□□□□ 0.59
UBXN1-209ENST00000528907 GOLGA2Q08379 1002 aa18.74■□□□□ 0.59
UBXN1-209ENST00000528907 MBIPQ9NS73 344 aa18.74■□□□□ 0.59
UBXN1-209ENST00000528907 MIS18AQ9NYP9 233 aa18.74■□□□□ 0.59
UBXN1-209ENST00000528907 CCNL1Q9UK58 526 aaPredicted RBP18.74■□□□□ 0.59
UBXN1-209ENST00000528907 TEX13AQ9BXU3 409 aaPredicted RBP18.73■□□□□ 0.59
UBXN1-209ENST00000528907 LRRC4BQ9NT99 713 aa18.73■□□□□ 0.59
UBXN1-209ENST00000528907 SOS1Q07889 1333 aaPredicted RBP18.73■□□□□ 0.59
UBXN1-209ENST00000528907 E9PSI1 815 aa18.72■□□□□ 0.59
UBXN1-209ENST00000528907 PTCD1O75127 700 aaKnown RBP18.72■□□□□ 0.59
UBXN1-209ENST00000528907 ATP6V1AP38606 617 aa18.72■□□□□ 0.59
UBXN1-209ENST00000528907 TRMT2AQ8IZ69 625 aaKnown RBP18.72■□□□□ 0.59
UBXN1-209ENST00000528907 RBM42Q9BTD8 480 aaKnown RBP18.72■□□□□ 0.59
UBXN1-209ENST00000528907 MYH16Q9H6N6 1097 aa18.72■□□□□ 0.59
UBXN1-209ENST00000528907 C4BP0C0L5 1744 aa18.71■□□□□ 0.59
UBXN1-209ENST00000528907 HOXB7P09629 217 aa18.71■□□□□ 0.59
UBXN1-209ENST00000528907 SNRPA1P09661 255 aaKnown RBP18.71■□□□□ 0.59
UBXN1-209ENST00000528907 SLFN5Q08AF3 891 aa18.71■□□□□ 0.59
UBXN1-209ENST00000528907 SPINK5Q9NQ38 1064 aaPredicted RBP18.71■□□□□ 0.59
UBXN1-209ENST00000528907 LAS1LQ9Y4W2 734 aaKnown RBP18.71■□□□□ 0.59
UBXN1-209ENST00000528907 QSER1Q2KHR3 1735 aa18.71■□□□□ 0.59
UBXN1-209ENST00000528907 GIGYF1O75420 1035 aaPredicted RBP18.7■□□□□ 0.58
UBXN1-209ENST00000528907 ITPK1Q13572 414 aa18.7■□□□□ 0.58
UBXN1-209ENST00000528907 FANCIQ9NVI1 1328 aa18.7■□□□□ 0.58
UBXN1-209ENST00000528907 RC3H1Q5TC82 1133 aaKnown RBP18.69■□□□□ 0.58
UBXN1-209ENST00000528907 CNTNAP4Q9C0A0 1308 aa18.69■□□□□ 0.58
UBXN1-209ENST00000528907 CYP19A1P11511 503 aaPredicted RBP18.67■□□□□ 0.58
UBXN1-209ENST00000528907 DNAJC10Q8IXB1 793 aa18.67■□□□□ 0.58
UBXN1-209ENST00000528907 LINC00116Q8NCU8 138 aa18.67■□□□□ 0.58
UBXN1-209ENST00000528907 TSR2Q969E8 191 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms