RNA–Protein interactions for RNA: ENST00000528895.5

TM9SF1-207, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-207ENST00000528895 VIRMAQ69YN4 1812 aaKnown RBP15.3■□□□□ 0.04
TM9SF1-207ENST00000528895 TRMT2AQ8IZ69 625 aaKnown RBP15.3■□□□□ 0.04
TM9SF1-207ENST00000528895 SPINK5Q9NQ38 1064 aaPredicted RBP15.3■□□□□ 0.04
TM9SF1-207ENST00000528895 BABAM1Q9NWV8 329 aa15.3■□□□□ 0.04
TM9SF1-207ENST00000528895 A0A0G2JS52 829 aa15.29■□□□□ 0.04
TM9SF1-207ENST00000528895 CYP27B1O15528 508 aa15.29■□□□□ 0.04
TM9SF1-207ENST00000528895 MYT1Q01538 1121 aa15.29■□□□□ 0.04
TM9SF1-207ENST00000528895 MPRIPQ6WCQ1 1025 aa15.29■□□□□ 0.04
TM9SF1-207ENST00000528895 ZNF853P0CG23 659 aa15.28■□□□□ 0.04
TM9SF1-207ENST00000528895 FAM98CQ17RN3 349 aaKnown RBP15.28■□□□□ 0.04
TM9SF1-207ENST00000528895 IL17REQ8NFR9 667 aa15.28■□□□□ 0.04
TM9SF1-207ENST00000528895 DDX54Q8TDD1 881 aaKnown RBP15.28■□□□□ 0.04
TM9SF1-207ENST00000528895 TSPYL4Q9UJ04 414 aa15.28■□□□□ 0.04
TM9SF1-207ENST00000528895 CT47B1P0C2W7 299 aaPredicted RBP15.27■□□□□ 0.04
TM9SF1-207ENST00000528895 NKX1-1Q15270 411 aaPredicted RBP15.27■□□□□ 0.04
TM9SF1-207ENST00000528895 TSR2Q969E8 191 aaKnown RBP15.27■□□□□ 0.04
TM9SF1-207ENST00000528895 MBIPQ9NS73 344 aa15.27■□□□□ 0.04
TM9SF1-207ENST00000528895 SIPA1L3O60292 1781 aaPredicted RBP15.26■□□□□ 0.03
TM9SF1-207ENST00000528895 CHL1O00533 1208 aa15.26■□□□□ 0.03
TM9SF1-207ENST00000528895 TAF7Q15545 349 aaPredicted RBP15.26■□□□□ 0.03
TM9SF1-207ENST00000528895 LGR6Q9HBX8 967 aa15.26■□□□□ 0.03
TM9SF1-207ENST00000528895 KDM3BQ7LBC6 1761 aa15.26■□□□□ 0.03
TM9SF1-207ENST00000528895 SEPT12Q8IYM1 358 aa15.25■□□□□ 0.03
TM9SF1-207ENST00000528895 SLC52A2Q9HAB3 445 aa15.25■□□□□ 0.03
TM9SF1-207ENST00000528895 TOGARAM1Q9Y4F4 1720 aa15.24■□□□□ 0.03
TM9SF1-207ENST00000528895 ERVV-2B6SEH9 535 aa15.24■□□□□ 0.03
TM9SF1-207ENST00000528895 CABP4P57796 275 aa15.24■□□□□ 0.03
TM9SF1-207ENST00000528895 DEFB132Q7Z7B7 95 aa15.24■□□□□ 0.03
TM9SF1-207ENST00000528895 RCAN3Q9UKA8 241 aa15.24■□□□□ 0.03
TM9SF1-207ENST00000528895 LRP5O75197 1615 aa15.24■□□□□ 0.03
TM9SF1-207ENST00000528895 DOT1LQ8TEK3 1739 aa15.23■□□□□ 0.03
TM9SF1-207ENST00000528895 BTBD11A6QL63 1104 aa15.23■□□□□ 0.03
TM9SF1-207ENST00000528895 ONECUT3O60422 494 aaPredicted RBP15.23■□□□□ 0.03
TM9SF1-207ENST00000528895 EXOSC9Q06265 439 aaKnown RBP15.23■□□□□ 0.03
TM9SF1-207ENST00000528895 ZNF428Q96B54 188 aa15.22■□□□□ 0.03
TM9SF1-207ENST00000528895 SOS1Q07889 1333 aaPredicted RBP15.21■□□□□ 0.03
TM9SF1-207ENST00000528895 SF3B2Q13435 895 aaKnown RBP15.21■□□□□ 0.03
TM9SF1-207ENST00000528895 TMOD3Q9NYL9 352 aa15.21■□□□□ 0.03
TM9SF1-207ENST00000528895 PAPPAQ13219 1627 aa15.21■□□□□ 0.02
TM9SF1-207ENST00000528895 KRT27Q7Z3Y8 459 aa15.2■□□□□ 0.02
TM9SF1-207ENST00000528895 TTC5Q8N0Z6 440 aa15.2■□□□□ 0.02
TM9SF1-207ENST00000528895 TWISTNBQ3B726 338 aaPredicted RBP15.19■□□□□ 0.02
TM9SF1-207ENST00000528895 MARCH10Q8NA82 808 aaPredicted RBP15.19■□□□□ 0.02
TM9SF1-207ENST00000528895 NFATC2IPQ8NCF5 419 aa15.19■□□□□ 0.02
TM9SF1-207ENST00000528895 CHMP4AQ9BY43 222 aa15.19■□□□□ 0.02
TM9SF1-207ENST00000528895 MIS18AQ9NYP9 233 aa15.19■□□□□ 0.02
TM9SF1-207ENST00000528895 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.18■□□□□ 0.02
TM9SF1-207ENST00000528895 NEFLP07196 543 aa15.17■□□□□ 0.02
TM9SF1-207ENST00000528895 HOXB7P09629 217 aa15.17■□□□□ 0.02
TM9SF1-207ENST00000528895 ZNF790Q6PG37 636 aa15.17■□□□□ 0.02
TM9SF1-207ENST00000528895 BCL9O00512 1426 aa15.17■□□□□ 0.02
TM9SF1-207ENST00000528895 ITGB4P16144 1822 aa15.16■□□□□ 0.02
TM9SF1-207ENST00000528895 EIF4A1P60842 406 aaKnown RBP15.16■□□□□ 0.02
TM9SF1-207ENST00000528895 ALDH1L2Q3SY69 923 aa15.16■□□□□ 0.02
TM9SF1-207ENST00000528895 C8orf58Q8NAV2 365 aa15.16■□□□□ 0.02
TM9SF1-207ENST00000528895 SYTL4Q96C24 671 aaPredicted RBP15.16■□□□□ 0.02
TM9SF1-207ENST00000528895 SUPT16HQ9Y5B9 1047 aaKnown RBP15.16■□□□□ 0.02
TM9SF1-207ENST00000528895 UBR2Q8IWV8 1755 aa15.16■□□□□ 0.02
TM9SF1-207ENST00000528895 NHSQ6T4R5 1651 aa15.16■□□□□ 0.02
TM9SF1-207ENST00000528895 RARSP54136 660 aaKnown RBP15.15■□□□□ 0.02
TM9SF1-207ENST00000528895 SMC4Q9NTJ3 1288 aa15.15■□□□□ 0.02
TM9SF1-207ENST00000528895 LAMB4A4D0S4 1761 aa15.14■□□□□ 0.01
TM9SF1-207ENST00000528895 ELL2O00472 640 aaPredicted RBP15.14■□□□□ 0.01
TM9SF1-207ENST00000528895 VAMP4O75379 141 aa15.14■□□□□ 0.01
TM9SF1-207ENST00000528895 CANXP27824 592 aaKnown RBP15.14■□□□□ 0.01
TM9SF1-207ENST00000528895 BAG6P46379 1132 aa15.14■□□□□ 0.01
TM9SF1-207ENST00000528895 RRP1P56182 461 aaKnown RBP15.14■□□□□ 0.01
TM9SF1-207ENST00000528895 TSPYL6Q8N831 410 aa15.14■□□□□ 0.01
TM9SF1-207ENST00000528895 FMNL2Q96PY5 1086 aa15.14■□□□□ 0.01
TM9SF1-207ENST00000528895 KIF16BQ96L93 1317 aa15.14■□□□□ 0.01
TM9SF1-207ENST00000528895 KCPQ6ZWJ8 1503 aa15.13■□□□□ 0.01
TM9SF1-207ENST00000528895 SLC39A6Q13433 755 aa15.13■□□□□ 0.01
TM9SF1-207ENST00000528895 TNS1Q9HBL0 1735 aaKnown RBP15.13■□□□□ 0.01
TM9SF1-207ENST00000528895 KCNQ3O43525 872 aa15.12■□□□□ 0.01
TM9SF1-207ENST00000528895 KRT24Q2M2I5 525 aa15.12■□□□□ 0.01
TM9SF1-207ENST00000528895 PIGBQ92521 554 aa15.12■□□□□ 0.01
TM9SF1-207ENST00000528895 STK31Q9BXU1 1019 aa15.12■□□□□ 0.01
TM9SF1-207ENST00000528895 RNF123Q5XPI4 1314 aa15.12■□□□□ 0.01
TM9SF1-207ENST00000528895 HEG1Q9ULI3 1381 aa15.11■□□□□ 0.01
TM9SF1-207ENST00000528895 PSDA5PKW4 1024 aaPredicted RBP15.11■□□□□ 0.01
TM9SF1-207ENST00000528895 PRIM1P49642 420 aaKnown RBP15.11■□□□□ 0.01
TM9SF1-207ENST00000528895 HDGFL1Q5TGJ6 251 aa15.11■□□□□ 0.01
TM9SF1-207ENST00000528895 CCDC30Q5VVM6 783 aa15.11■□□□□ 0.01
TM9SF1-207ENST00000528895 ACSBG1Q96GR2 724 aa15.11■□□□□ 0.01
TM9SF1-207ENST00000528895 C5P01031 1676 aa15.11■□□□□ 0.01
TM9SF1-207ENST00000528895 BCAR3O75815 825 aa15.1■□□□□ 0.01
TM9SF1-207ENST00000528895 SNRPA1P09661 255 aaKnown RBP15.1■□□□□ 0.01
TM9SF1-207ENST00000528895 SSH1Q8WYL5 1049 aa15.1■□□□□ 0.01
TM9SF1-207ENST00000528895 ZNF496Q96IT1 587 aaPredicted RBP15.1■□□□□ 0.01
TM9SF1-207ENST00000528895 BCL2L13Q9BXK5 485 aa15.1■□□□□ 0.01
TM9SF1-207ENST00000528895 GIGYF1O75420 1035 aaPredicted RBP15.09■□□□□ 0.01
TM9SF1-207ENST00000528895 BRPF1P55201 1214 aaPredicted RBP15.09■□□□□ 0.01
TM9SF1-207ENST00000528895 FAM196AQ6ZSG2 479 aa15.09■□□□□ 0.01
TM9SF1-207ENST00000528895 SMARCC1Q92922 1105 aaPredicted RBP15.09■□□□□ 0.01
TM9SF1-207ENST00000528895 IPO8O15397 1037 aaKnown RBP15.08■□□□□ 0
TM9SF1-207ENST00000528895 MS4A1P11836 297 aa15.08■□□□□ 0
TM9SF1-207ENST00000528895 VSIG10Q8N0Z9 540 aa15.08■□□□□ 0
TM9SF1-207ENST00000528895 ATG3Q9NT62 314 aa15.08■□□□□ 0
TM9SF1-207ENST00000528895 CICQ96RK0 1608 aaPredicted RBP15.07■□□□□ 0
TM9SF1-207ENST00000528895 EN1Q05925 392 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms