RNA–Protein interactions for RNA: ENST00000528730.1

PDZD3-209, Transcript of PDZ domain containing 3, humanhuman

TSL 3

Gene PDZD3, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-209ENST00000528730 PRKAR2BP31323 418 aa17.47■□□□□ 0.39
PDZD3-209ENST00000528730 MTHFSDQ2M296 383 aaKnown RBP17.47■□□□□ 0.39
PDZD3-209ENST00000528730 MRS2Q9HD23 443 aa17.47■□□□□ 0.39
PDZD3-209ENST00000528730 TAF1LQ8IZX4 1826 aa17.47■□□□□ 0.39
PDZD3-209ENST00000528730 LOC102724428A0A0B4J2F2 783 aa17.46■□□□□ 0.39
PDZD3-209ENST00000528730 NEFMP07197 916 aa17.46■□□□□ 0.39
PDZD3-209ENST00000528730 ATP6V1AP38606 617 aa17.46■□□□□ 0.39
PDZD3-209ENST00000528730 SIK1P57059 783 aa17.46■□□□□ 0.39
PDZD3-209ENST00000528730 AKT1S1Q96B36 256 aa17.46■□□□□ 0.39
PDZD3-209ENST00000528730 AK7Q96M32 723 aa17.46■□□□□ 0.39
PDZD3-209ENST00000528730 TUBGCP6Q96RT7 1819 aa17.46■□□□□ 0.39
PDZD3-209ENST00000528730 NFATC2IPQ8NCF5 419 aa17.45■□□□□ 0.38
PDZD3-209ENST00000528730 GAS2L2Q8NHY3 880 aa17.45■□□□□ 0.38
PDZD3-209ENST00000528730 YTHDC1Q96MU7 727 aaKnown RBP17.45■□□□□ 0.38
PDZD3-209ENST00000528730 ATG3Q9NT62 314 aa17.45■□□□□ 0.38
PDZD3-209ENST00000528730 MTFR1LQ9H019 292 aa17.44■□□□□ 0.38
PDZD3-209ENST00000528730 C4BP0C0L5 1744 aa17.44■□□□□ 0.38
PDZD3-209ENST00000528730 QSER1Q2KHR3 1735 aa17.44■□□□□ 0.38
PDZD3-209ENST00000528730 RNMTO43148 476 aaKnown RBP17.43■□□□□ 0.38
PDZD3-209ENST00000528730 PTCD1O75127 700 aaKnown RBP17.43■□□□□ 0.38
PDZD3-209ENST00000528730 PHF14O94880 888 aa17.43■□□□□ 0.38
PDZD3-209ENST00000528730 PNPLA7Q6ZV29 1317 aa17.43■□□□□ 0.38
PDZD3-209ENST00000528730 RSPH6AQ9H0K4 717 aa17.42■□□□□ 0.38
PDZD3-209ENST00000528730 LGR6Q9HBX8 967 aa17.42■□□□□ 0.38
PDZD3-209ENST00000528730 MAP3K5Q99683 1374 aa17.41■□□□□ 0.38
PDZD3-209ENST00000528730 GNAT3A8MTJ3 354 aa17.41■□□□□ 0.38
PDZD3-209ENST00000528730 TEFQ10587 303 aa17.41■□□□□ 0.38
PDZD3-209ENST00000528730 KLHL34Q8N239 644 aa17.41■□□□□ 0.38
PDZD3-209ENST00000528730 SLC52A2Q9HAB3 445 aa17.41■□□□□ 0.38
PDZD3-209ENST00000528730 POLD1P28340 1107 aa17.4■□□□□ 0.38
PDZD3-209ENST00000528730 GNPATO15228 680 aa17.39■□□□□ 0.37
PDZD3-209ENST00000528730 ITPK1Q13572 414 aa17.39■□□□□ 0.37
PDZD3-209ENST00000528730 LINC00116Q8NCU8 138 aa17.39■□□□□ 0.37
PDZD3-209ENST00000528730 FLAD1Q8NFF5 587 aa17.39■□□□□ 0.37
PDZD3-209ENST00000528730 SLC16A10Q8TF71 515 aa17.39■□□□□ 0.37
PDZD3-209ENST00000528730 RTF1Q92541 710 aaKnown RBP17.39■□□□□ 0.37
PDZD3-209ENST00000528730 PHACTR3Q96KR7 559 aa17.39■□□□□ 0.37
PDZD3-209ENST00000528730 FCHSD2O94868 740 aa17.38■□□□□ 0.37
PDZD3-209ENST00000528730 COL23A1Q86Y22 540 aaPredicted RBP17.38■□□□□ 0.37
PDZD3-209ENST00000528730 TTC5Q8N0Z6 440 aa17.38■□□□□ 0.37
PDZD3-209ENST00000528730 MAPK8IP3Q9UPT6 1336 aa17.38■□□□□ 0.37
PDZD3-209ENST00000528730 SLC39A6Q13433 755 aa17.37■□□□□ 0.37
PDZD3-209ENST00000528730 MSL1Q68DK7 614 aa17.37■□□□□ 0.37
PDZD3-209ENST00000528730 UBR3Q6ZT12 1888 aa17.36■□□□□ 0.37
PDZD3-209ENST00000528730 PNNQ9H307 717 aaKnown RBP17.36■□□□□ 0.37
PDZD3-209ENST00000528730 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.35■□□□□ 0.37
PDZD3-209ENST00000528730 DCAF8L1A6NGE4 600 aa17.35■□□□□ 0.37
PDZD3-209ENST00000528730 PTGER2P43116 358 aa17.35■□□□□ 0.37
PDZD3-209ENST00000528730 CCDC184Q52MB2 194 aa17.35■□□□□ 0.37
PDZD3-209ENST00000528730 SMIM5Q71RC9 77 aa17.35■□□□□ 0.37
PDZD3-209ENST00000528730 PNISRQ8TF01 805 aaKnown RBP17.35■□□□□ 0.37
PDZD3-209ENST00000528730 RTCBQ9Y3I0 505 aaKnown RBP17.35■□□□□ 0.37
PDZD3-209ENST00000528730 MRC1P22897 1456 aa17.35■□□□□ 0.37
PDZD3-209ENST00000528730 COL5A3P25940 1745 aaPredicted RBP17.34■□□□□ 0.37
PDZD3-209ENST00000528730 WDR43Q15061 677 aaKnown RBP eCLIP17.34■□□□□ 0.37
PDZD3-209ENST00000528730 SRCAPQ6ZRS2 3230 aa17.34■□□□□ 0.37
PDZD3-209ENST00000528730 ARXQ96QS3 562 aa17.34■□□□□ 0.37
PDZD3-209ENST00000528730 ADAMTS7Q9UKP4 1686 aa17.33■□□□□ 0.37
PDZD3-209ENST00000528730 SSFA2P28290 1259 aa17.33■□□□□ 0.36
PDZD3-209ENST00000528730 FAM9BQ8IZU0 186 aa17.33■□□□□ 0.36
PDZD3-209ENST00000528730 SLC4A9Q96Q91 983 aa17.33■□□□□ 0.36
PDZD3-209ENST00000528730 ZNF831Q5JPB2 1677 aa17.32■□□□□ 0.36
PDZD3-209ENST00000528730 MCM10Q7L590 875 aa17.32■□□□□ 0.36
PDZD3-209ENST00000528730 IL17REQ8NFR9 667 aa17.32■□□□□ 0.36
PDZD3-209ENST00000528730 TJP1Q07157 1748 aa17.31■□□□□ 0.36
PDZD3-209ENST00000528730 FHDC1Q9C0D6 1143 aaPredicted RBP17.31■□□□□ 0.36
PDZD3-209ENST00000528730 DLG5Q8TDM6 1919 aa17.3■□□□□ 0.36
PDZD3-209ENST00000528730 CRKLP46109 303 aaKnown RBP17.3■□□□□ 0.36
PDZD3-209ENST00000528730 DCTN1Q14203 1278 aa17.3■□□□□ 0.36
PDZD3-209ENST00000528730 TRAPPC3LQ5T215 181 aa17.3■□□□□ 0.36
PDZD3-209ENST00000528730 AMIGO3Q86WK7 504 aa17.3■□□□□ 0.36
PDZD3-209ENST00000528730 DNAJC10Q8IXB1 793 aa17.3■□□□□ 0.36
PDZD3-209ENST00000528730 CNTNAP4Q9C0A0 1308 aa17.29■□□□□ 0.36
PDZD3-209ENST00000528730 BTBD11A6QL63 1104 aa17.29■□□□□ 0.36
PDZD3-209ENST00000528730 RFC4P35249 363 aa17.29■□□□□ 0.36
PDZD3-209ENST00000528730 SIPA1L3O60292 1781 aaPredicted RBP17.29■□□□□ 0.36
PDZD3-209ENST00000528730 KCPQ6ZWJ8 1503 aa17.28■□□□□ 0.36
PDZD3-209ENST00000528730 RC3H1Q5TC82 1133 aaKnown RBP17.28■□□□□ 0.36
PDZD3-209ENST00000528730 SGIP1Q9BQI5 828 aa17.28■□□□□ 0.36
PDZD3-209ENST00000528730 RPS6KA4O75676 772 aa17.27■□□□□ 0.36
PDZD3-209ENST00000528730 HNRNPUQ00839 825 aaKnown RBP eCLIP17.27■□□□□ 0.36
PDZD3-209ENST00000528730 NFE2L2Q16236 605 aa17.27■□□□□ 0.36
PDZD3-209ENST00000528730 ZNF790Q6PG37 636 aa17.27■□□□□ 0.36
PDZD3-209ENST00000528730 CCDC146Q8IYE0 955 aa17.27■□□□□ 0.36
PDZD3-209ENST00000528730 MYH14Q7Z406 1995 aaKnown RBP17.27■□□□□ 0.36
PDZD3-209ENST00000528730 UBR2Q8IWV8 1755 aa17.27■□□□□ 0.35
PDZD3-209ENST00000528730 HTATSF1O43719 755 aaKnown RBP17.26■□□□□ 0.35
PDZD3-209ENST00000528730 PELP1Q8IZL8 1130 aaKnown RBP17.26■□□□□ 0.35
PDZD3-209ENST00000528730 FMNL2Q96PY5 1086 aa17.26■□□□□ 0.35
PDZD3-209ENST00000528730 SYT17Q9BSW7 474 aa17.26■□□□□ 0.35
PDZD3-209ENST00000528730 CCDC87Q9NVE4 849 aa17.26■□□□□ 0.35
PDZD3-209ENST00000528730 ZNF330Q9Y3S2 320 aaPredicted RBP17.26■□□□□ 0.35
PDZD3-209ENST00000528730 CEMIPQ8WUJ3 1361 aa17.26■□□□□ 0.35
PDZD3-209ENST00000528730 STARD3NLO95772 234 aa17.25■□□□□ 0.35
PDZD3-209ENST00000528730 ADRA2BP18089 450 aa17.25■□□□□ 0.35
PDZD3-209ENST00000528730 NPM2Q86SE8 214 aaKnown RBP17.25■□□□□ 0.35
PDZD3-209ENST00000528730 ZNF496Q96IT1 587 aaPredicted RBP17.25■□□□□ 0.35
PDZD3-209ENST00000528730 CICQ96RK0 1608 aaPredicted RBP17.25■□□□□ 0.35
PDZD3-209ENST00000528730 C4AP0C0L4 1744 aa17.24■□□□□ 0.35
PDZD3-209ENST00000528730 COL24A1Q17RW2 1714 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms