RNA–Protein interactions for RNA: ENST00000528678.1

CCDC180-209, Transcript of coiled-coil domain containing 180, humanhuman

TSL 3

Gene CCDC180, Length 689 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-209ENST00000528678 SETD5Q9C0A6 1442 aa8.71□□□□□ -1.01
CCDC180-209ENST00000528678 TCOF1Q13428 1488 aaKnown RBP8.71□□□□□ -1.01
CCDC180-209ENST00000528678 CTC1Q2NKJ3 1217 aa8.71□□□□□ -1.02
CCDC180-209ENST00000528678 TBC1D9Q6ZT07 1266 aa8.71□□□□□ -1.02
CCDC180-209ENST00000528678 PNMA1Q8ND90 353 aa8.71□□□□□ -1.02
CCDC180-209ENST00000528678 ABCA8O94911 1581 aa8.7□□□□□ -1.02
CCDC180-209ENST00000528678 ZCCHC11Q5TAX3 1644 aaKnown RBP8.7□□□□□ -1.02
CCDC180-209ENST00000528678 ADCY10Q96PN6 1610 aa8.7□□□□□ -1.02
CCDC180-209ENST00000528678 DNAJC14Q6Y2X3 702 aaPredicted RBP8.7□□□□□ -1.02
CCDC180-209ENST00000528678 KIAA1522Q9P206 1035 aaPredicted RBP8.7□□□□□ -1.02
CCDC180-209ENST00000528678 CDC42BPAQ5VT25 1732 aa8.7□□□□□ -1.02
CCDC180-209ENST00000528678 AKNAQ7Z591 1439 aa8.7□□□□□ -1.02
CCDC180-209ENST00000528678 NUP153P49790 1475 aaKnown RBP8.7□□□□□ -1.02
CCDC180-209ENST00000528678 MAGI3Q5TCQ9 1506 aa8.7□□□□□ -1.02
CCDC180-209ENST00000528678 KIF14Q15058 1648 aa8.69□□□□□ -1.02
CCDC180-209ENST00000528678 VARSP26640 1264 aaKnown RBP8.69□□□□□ -1.02
CCDC180-209ENST00000528678 EIF4G2P78344 907 aaKnown RBP eCLIP8.69□□□□□ -1.02
CCDC180-209ENST00000528678 TMEM164Q5U3C3 297 aa8.69□□□□□ -1.02
CCDC180-209ENST00000528678 SIRT1Q96EB6 747 aa8.69□□□□□ -1.02
CCDC180-209ENST00000528678 TLL2Q9Y6L7 1015 aa8.69□□□□□ -1.02
CCDC180-209ENST00000528678 PRG4Q92954 1404 aaPredicted RBP8.69□□□□□ -1.02
CCDC180-209ENST00000528678 C4orf48Q5BLP8 95 aa8.68□□□□□ -1.02
CCDC180-209ENST00000528678 LRRN4Q8WUT4 740 aa8.68□□□□□ -1.02
CCDC180-209ENST00000528678 ZNF775Q96BV0 537 aaPredicted RBP8.68□□□□□ -1.02
CCDC180-209ENST00000528678 BCL2L13Q9BXK5 485 aa8.68□□□□□ -1.02
CCDC180-209ENST00000528678 GMPR2Q9P2T1 348 aaKnown RBP8.68□□□□□ -1.02
CCDC180-209ENST00000528678 ZMIZ1Q9ULJ6 1067 aa8.68□□□□□ -1.02
CCDC180-209ENST00000528678 NOVA2Q9UNW9 492 aaKnown RBP8.68□□□□□ -1.02
CCDC180-209ENST00000528678 RAB3GAP2Q9H2M9 1393 aa8.68□□□□□ -1.02
CCDC180-209ENST00000528678 HFM1A2PYH4 1435 aa8.67□□□□□ -1.02
CCDC180-209ENST00000528678 ARID4AP29374 1257 aaPredicted RBP8.67□□□□□ -1.02
CCDC180-209ENST00000528678 PLB1Q6P1J6 1458 aa8.67□□□□□ -1.02
CCDC180-209ENST00000528678 MYO5CQ9NQX4 1742 aa8.67□□□□□ -1.02
CCDC180-209ENST00000528678 TCF3P15923 654 aa8.66□□□□□ -1.02
CCDC180-209ENST00000528678 ZNF16P17020 682 aaPredicted RBP8.66□□□□□ -1.02
CCDC180-209ENST00000528678 FAM177A1Q8N128 213 aaPredicted RBP8.66□□□□□ -1.02
CCDC180-209ENST00000528678 STK32AQ8WU08 396 aa8.66□□□□□ -1.02
CCDC180-209ENST00000528678 WASF2Q9Y6W5 498 aa8.66□□□□□ -1.02
CCDC180-209ENST00000528678 TROQ12816 1431 aaPredicted RBP8.65□□□□□ -1.02
CCDC180-209ENST00000528678 FAM50AQ14320 339 aaKnown RBP8.65□□□□□ -1.02
CCDC180-209ENST00000528678 ATP13A2Q9NQ11 1180 aa8.65□□□□□ -1.02
CCDC180-209ENST00000528678 CROCC2H7BZ55 1655 aa8.65□□□□□ -1.03
CCDC180-209ENST00000528678 PTPN23Q9H3S7 1636 aa8.65□□□□□ -1.03
CCDC180-209ENST00000528678 CDC42BPBQ9Y5S2 1711 aa8.64□□□□□ -1.03
CCDC180-209ENST00000528678 AGERQ15109 404 aa8.64□□□□□ -1.03
CCDC180-209ENST00000528678 MPNDQ8N594 471 aa8.64□□□□□ -1.03
CCDC180-209ENST00000528678 FAM174AQ8TBP5 190 aa8.64□□□□□ -1.03
CCDC180-209ENST00000528678 EPS8L1Q8TE68 723 aa8.64□□□□□ -1.03
CCDC180-209ENST00000528678 ADGBQ8N7X0 1667 aa8.64□□□□□ -1.03
CCDC180-209ENST00000528678 SOWAHDA6NJG2 315 aa8.63□□□□□ -1.03
CCDC180-209ENST00000528678 PHLDB3Q6NSJ2 640 aa8.63□□□□□ -1.03
CCDC180-209ENST00000528678 CCDC125Q86Z20 511 aa8.63□□□□□ -1.03
CCDC180-209ENST00000528678 RIMBP3CA6NJZ7 1639 aa8.62□□□□□ -1.03
CCDC180-209ENST00000528678 RIMBP3BA6NNM3 1639 aa8.62□□□□□ -1.03
CCDC180-209ENST00000528678 RIMBP3Q9UFD9 1639 aa8.62□□□□□ -1.03
CCDC180-209ENST00000528678 C11orf95C9JLR9 678 aaPredicted RBP8.62□□□□□ -1.03
CCDC180-209ENST00000528678 SSFA2P28290 1259 aa8.62□□□□□ -1.03
CCDC180-209ENST00000528678 MARSP56192 900 aaKnown RBP8.62□□□□□ -1.03
CCDC180-209ENST00000528678 ARID5BQ14865 1188 aa8.62□□□□□ -1.03
CCDC180-209ENST00000528678 NR6A1Q15406 480 aa8.62□□□□□ -1.03
CCDC180-209ENST00000528678 SH3BP5LQ7L8J4 393 aa8.62□□□□□ -1.03
CCDC180-209ENST00000528678 SH3RF1Q7Z6J0 888 aa8.62□□□□□ -1.03
CCDC180-209ENST00000528678 BPHLQ86WA6 291 aaPredicted RBP8.62□□□□□ -1.03
CCDC180-209ENST00000528678 NFATC2IPQ8NCF5 419 aa8.62□□□□□ -1.03
CCDC180-209ENST00000528678 ARMC2Q8NEN0 867 aa8.62□□□□□ -1.03
CCDC180-209ENST00000528678 GIPC2Q8TF65 315 aa8.62□□□□□ -1.03
CCDC180-209ENST00000528678 C8orf37Q96NL8 207 aa8.62□□□□□ -1.03
CCDC180-209ENST00000528678 CDK15Q96Q40 435 aa8.62□□□□□ -1.03
CCDC180-209ENST00000528678 MAPKBP1O60336 1514 aa8.62□□□□□ -1.03
CCDC180-209ENST00000528678 ABCC2Q92887 1545 aa8.62□□□□□ -1.03
CCDC180-209ENST00000528678 NAIPQ13075 1403 aa8.62□□□□□ -1.03
CCDC180-209ENST00000528678 PTPRKQ15262 1439 aa8.62□□□□□ -1.03
CCDC180-209ENST00000528678 PREX2Q70Z35 1606 aa8.62□□□□□ -1.03
CCDC180-209ENST00000528678 ROCK1Q13464 1354 aa8.61□□□□□ -1.03
CCDC180-209ENST00000528678 USP17L3A6NCW0 530 aa8.61□□□□□ -1.03
CCDC180-209ENST00000528678 USP17L4A6NCW7 530 aa8.61□□□□□ -1.03
CCDC180-209ENST00000528678 FAM196BA6NMK8 535 aa8.61□□□□□ -1.03
CCDC180-209ENST00000528678 CAPN5O15484 640 aaPredicted RBP8.61□□□□□ -1.03
CCDC180-209ENST00000528678 SNRPBP14678 240 aaKnown RBP8.61□□□□□ -1.03
CCDC180-209ENST00000528678 GRM5P41594 1212 aa8.61□□□□□ -1.03
CCDC180-209ENST00000528678 USP17L2Q6R6M4 530 aa8.61□□□□□ -1.03
CCDC180-209ENST00000528678 USP17L1Q7RTZ2 530 aa8.61□□□□□ -1.03
CCDC180-209ENST00000528678 GCC2Q8IWJ2 1684 aa8.61□□□□□ -1.03
CCDC180-209ENST00000528678 UACAQ9BZF9 1416 aa8.61□□□□□ -1.03
CCDC180-209ENST00000528678 USP17L15C9J2P7 530 aa8.6□□□□□ -1.03
CCDC180-209ENST00000528678 USP17L10C9JJH3 530 aa8.6□□□□□ -1.03
CCDC180-209ENST00000528678 USP17L13C9JLJ4 530 aa8.6□□□□□ -1.03
CCDC180-209ENST00000528678 USP17L12C9JPN9 530 aa8.6□□□□□ -1.03
CCDC180-209ENST00000528678 USP17L11C9JVI0 530 aa8.6□□□□□ -1.03
CCDC180-209ENST00000528678 USP17L21D6R901 530 aa8.6□□□□□ -1.03
CCDC180-209ENST00000528678 USP17L18D6R9N7 530 aa8.6□□□□□ -1.03
CCDC180-209ENST00000528678 USP17L22D6RA61 530 aa8.6□□□□□ -1.03
CCDC180-209ENST00000528678 USP17L17D6RBQ6 530 aa8.6□□□□□ -1.03
CCDC180-209ENST00000528678 USP17L19D6RCP7 530 aa8.6□□□□□ -1.03
CCDC180-209ENST00000528678 USP17L20D6RJB6 530 aa8.6□□□□□ -1.03
CCDC180-209ENST00000528678 CANXP27824 592 aaKnown RBP8.6□□□□□ -1.03
CCDC180-209ENST00000528678 USP17L24Q0WX57 530 aa8.6□□□□□ -1.03
CCDC180-209ENST00000528678 NNTQ13423 1086 aa8.6□□□□□ -1.03
CCDC180-209ENST00000528678 PLEKHM2Q8IWE5 1019 aa8.6□□□□□ -1.03
CCDC180-209ENST00000528678 DRC1Q96MC2 740 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms