RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 TBX22Q9Y458 520 aa23.16■■□□□ 1.3
TM9SF1-206ENST00000528669 ST18O60284 1047 aa23.16■■□□□ 1.3
TM9SF1-206ENST00000528669 CCDC30Q5VVM6 783 aa23.15■■□□□ 1.3
TM9SF1-206ENST00000528669 DDX49Q9Y6V7 483 aaKnown RBP23.15■■□□□ 1.3
TM9SF1-206ENST00000528669 HOXC9P31274 260 aa23.14■■□□□ 1.3
TM9SF1-206ENST00000528669 MCTP1Q6DN14 999 aa23.14■■□□□ 1.3
TM9SF1-206ENST00000528669 DNAJC5Q9H3Z4 198 aa23.14■■□□□ 1.29
TM9SF1-206ENST00000528669 NUCB2P80303 420 aa23.13■■□□□ 1.29
TM9SF1-206ENST00000528669 IL17REQ8NFR9 667 aa23.13■■□□□ 1.29
TM9SF1-206ENST00000528669 LRRCC1Q9C099 1032 aa23.13■■□□□ 1.29
TM9SF1-206ENST00000528669 FAM208AQ9UK61 1670 aaKnown RBP23.12■■□□□ 1.29
TM9SF1-206ENST00000528669 HTATSF1O43719 755 aaKnown RBP23.12■■□□□ 1.29
TM9SF1-206ENST00000528669 CYP2E1P05181 493 aaPredicted RBP23.12■■□□□ 1.29
TM9SF1-206ENST00000528669 GNAI3P08754 354 aa23.11■■□□□ 1.29
TM9SF1-206ENST00000528669 USHBP1Q8N6Y0 703 aa23.11■■□□□ 1.29
TM9SF1-206ENST00000528669 LRRFIP2Q9Y608 721 aaKnown RBP23.11■■□□□ 1.29
TM9SF1-206ENST00000528669 KLHL40Q2TBA0 621 aa23.11■■□□□ 1.29
TM9SF1-206ENST00000528669 SALL3Q9BXA9 1300 aa23.11■■□□□ 1.29
TM9SF1-206ENST00000528669 ATP8B2P98198 1209 aa23.1■■□□□ 1.29
TM9SF1-206ENST00000528669 LRRC37A3O60309 1634 aa23.1■■□□□ 1.29
TM9SF1-206ENST00000528669 XRN1Q8IZH2 1706 aaKnown RBP23.1■■□□□ 1.29
TM9SF1-206ENST00000528669 MX1P20591 662 aa23.1■■□□□ 1.29
TM9SF1-206ENST00000528669 ABTB2Q8N961 1025 aa23.1■■□□□ 1.29
TM9SF1-206ENST00000528669 SLIT1O75093 1534 aa23.1■■□□□ 1.29
TM9SF1-206ENST00000528669 ARHGAP23Q9P227 1491 aa23.09■■□□□ 1.29
TM9SF1-206ENST00000528669 RILPL2Q969X0 211 aa23.09■■□□□ 1.29
TM9SF1-206ENST00000528669 MAP3K5Q99683 1374 aa23.09■■□□□ 1.29
TM9SF1-206ENST00000528669 NCLP19338 710 aaKnown RBP23.09■■□□□ 1.29
TM9SF1-206ENST00000528669 C14orf37Q86TY3 774 aa23.09■■□□□ 1.29
TM9SF1-206ENST00000528669 TRIM6-TRIM34B2RNG4 842 aa23.08■■□□□ 1.29
TM9SF1-206ENST00000528669 CWC22Q9HCG8 908 aaKnown RBP23.08■■□□□ 1.29
TM9SF1-206ENST00000528669 NWD1Q149M9 1564 aa23.08■■□□□ 1.28
TM9SF1-206ENST00000528669 KCNA6P17658 529 aa23.08■■□□□ 1.28
TM9SF1-206ENST00000528669 TAF7Q15545 349 aaPredicted RBP23.08■■□□□ 1.28
TM9SF1-206ENST00000528669 ESYT1Q9BSJ8 1104 aa23.08■■□□□ 1.28
TM9SF1-206ENST00000528669 NEK4P51957 841 aa23.07■■□□□ 1.28
TM9SF1-206ENST00000528669 IBTKQ9P2D0 1353 aaPredicted RBP23.07■■□□□ 1.28
TM9SF1-206ENST00000528669 PHAXQ9H814 394 aaKnown RBP23.07■■□□□ 1.28
TM9SF1-206ENST00000528669 LMBRD1Q9NUN5 540 aa23.07■■□□□ 1.28
TM9SF1-206ENST00000528669 ZDHHC9Q9Y397 364 aa23.07■■□□□ 1.28
TM9SF1-206ENST00000528669 CHAMP1Q96JM3 812 aa23.06■■□□□ 1.28
TM9SF1-206ENST00000528669 USP44Q9H0E7 712 aa23.06■■□□□ 1.28
TM9SF1-206ENST00000528669 MARF1Q9Y4F3 1742 aaKnown RBP23.06■■□□□ 1.28
TM9SF1-206ENST00000528669 CLCN1P35523 988 aa23.06■■□□□ 1.28
TM9SF1-206ENST00000528669 TUBGCP6Q96RT7 1819 aa23.05■■□□□ 1.28
TM9SF1-206ENST00000528669 PALD1Q9ULE6 856 aa23.05■■□□□ 1.28
TM9SF1-206ENST00000528669 ERBB4Q15303 1308 aa23.05■■□□□ 1.28
TM9SF1-206ENST00000528669 HDGFL1Q5TGJ6 251 aa23.04■■□□□ 1.28
TM9SF1-206ENST00000528669 CAVIN1Q6NZI2 390 aaKnown RBP23.04■■□□□ 1.28
TM9SF1-206ENST00000528669 UNC5CLQ8IV45 518 aa23.04■■□□□ 1.28
TM9SF1-206ENST00000528669 THEMISQ8N1K5 641 aaPredicted RBP23.04■■□□□ 1.28
TM9SF1-206ENST00000528669 IL1RAPL2Q9NP60 686 aa23.04■■□□□ 1.28
TM9SF1-206ENST00000528669 FOXD4L5Q5VV16 416 aaPredicted RBP23.04■■□□□ 1.28
TM9SF1-206ENST00000528669 FOXD4L4Q8WXT5 416 aaPredicted RBP23.04■■□□□ 1.28
TM9SF1-206ENST00000528669 UBTFL1P0CB47 393 aaPredicted RBP23.03■■□□□ 1.28
TM9SF1-206ENST00000528669 CHMLP26374 656 aa23.03■■□□□ 1.28
TM9SF1-206ENST00000528669 TRIM44Q96DX7 344 aaPredicted RBP23.03■■□□□ 1.28
TM9SF1-206ENST00000528669 ANO2Q9NQ90 1003 aa23.03■■□□□ 1.28
TM9SF1-206ENST00000528669 CACNA1FO60840 1977 aa23.03■■□□□ 1.28
TM9SF1-206ENST00000528669 TMX3Q96JJ7 454 aa23.03■■□□□ 1.28
TM9SF1-206ENST00000528669 PRPF40AO75400 957 aaKnown RBP23.02■■□□□ 1.28
TM9SF1-206ENST00000528669 NOL8Q76FK4 1167 aaKnown RBP23.02■■□□□ 1.28
TM9SF1-206ENST00000528669 SETD1BQ9UPS6 1966 aaKnown RBP23.02■■□□□ 1.28
TM9SF1-206ENST00000528669 ESPNB1AK53 854 aa23.02■■□□□ 1.28
TM9SF1-206ENST00000528669 EIF2S2P20042 333 aaKnown RBP23.02■■□□□ 1.28
TM9SF1-206ENST00000528669 NASPP49321 788 aaPredicted RBP23.01■■□□□ 1.27
TM9SF1-206ENST00000528669 ANKARQ7Z5J8 1434 aa23.01■■□□□ 1.27
TM9SF1-206ENST00000528669 NUTM1Q86Y26 1132 aa23.01■■□□□ 1.27
TM9SF1-206ENST00000528669 STAP2Q9UGK3 403 aa23■■□□□ 1.27
TM9SF1-206ENST00000528669 MCCP23508 829 aa23■■□□□ 1.27
TM9SF1-206ENST00000528669 ZSCAN23Q3MJ62 389 aa22.99■■□□□ 1.27
TM9SF1-206ENST00000528669 ZBTB7CA1YPR0 619 aa22.99■■□□□ 1.27
TM9SF1-206ENST00000528669 RBM33Q96EV2 1170 aaKnown RBP22.99■■□□□ 1.27
TM9SF1-206ENST00000528669 MAP4K4O95819 1239 aaPredicted RBP22.98■■□□□ 1.27
TM9SF1-206ENST00000528669 PPP1R42Q7Z4L9 355 aa22.98■■□□□ 1.27
TM9SF1-206ENST00000528669 IL25Q9H293 177 aa22.98■■□□□ 1.27
TM9SF1-206ENST00000528669 RBM27Q9P2N5 1060 aaKnown RBP22.98■■□□□ 1.27
TM9SF1-206ENST00000528669 SOS1Q07889 1333 aaPredicted RBP22.98■■□□□ 1.27
TM9SF1-206ENST00000528669 GPT2Q8TD30 523 aa22.98■■□□□ 1.27
TM9SF1-206ENST00000528669 SRCIN1Q9C0H9 1055 aa22.98■■□□□ 1.27
TM9SF1-206ENST00000528669 LGR6Q9HBX8 967 aa22.98■■□□□ 1.27
TM9SF1-206ENST00000528669 BABAM1Q9NWV8 329 aa22.98■■□□□ 1.27
TM9SF1-206ENST00000528669 SURF6O75683 361 aaKnown RBP22.97■■□□□ 1.27
TM9SF1-206ENST00000528669 ZNF445P59923 1031 aa22.97■■□□□ 1.27
TM9SF1-206ENST00000528669 SSH3Q8TE77 659 aa22.97■■□□□ 1.27
TM9SF1-206ENST00000528669 PXDNLA1KZ92 1463 aa22.97■■□□□ 1.27
TM9SF1-206ENST00000528669 N4BP2Q86UW6 1770 aaPredicted RBP22.97■■□□□ 1.27
TM9SF1-206ENST00000528669 NAP1L5Q96NT1 182 aaPredicted RBP22.97■■□□□ 1.27
TM9SF1-206ENST00000528669 UPF3BQ9BZI7 483 aaKnown RBP22.96■■□□□ 1.27
TM9SF1-206ENST00000528669 NBPF6Q5VWK0 638 aa22.96■■□□□ 1.27
TM9SF1-206ENST00000528669 NBPF4Q96M43 638 aa22.96■■□□□ 1.27
TM9SF1-206ENST00000528669 LTN1O94822 1766 aa22.95■■□□□ 1.27
TM9SF1-206ENST00000528669 FER1L4A9Z1Z3 1794 aa22.95■■□□□ 1.26
TM9SF1-206ENST00000528669 KCNQ3O43525 872 aa22.95■■□□□ 1.26
TM9SF1-206ENST00000528669 ANXA1P04083 346 aa22.94■■□□□ 1.26
TM9SF1-206ENST00000528669 NBPF7P0C2Y1 421 aaPredicted RBP22.94■■□□□ 1.26
TM9SF1-206ENST00000528669 CCDC173Q0VFZ6 552 aa22.94■■□□□ 1.26
TM9SF1-206ENST00000528669 CHPF2Q9P2E5 772 aa22.94■■□□□ 1.26
TM9SF1-206ENST00000528669 MCM2P49736 904 aa22.94■■□□□ 1.26
TM9SF1-206ENST00000528669 PHF8Q9UPP1 1060 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms