RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 TET3O43151 1660 aa21.43■■□□□ 1.02
LTBP3-210ENST00000528516 RPGRIP1LQ68CZ1 1315 aa21.43■■□□□ 1.02
LTBP3-210ENST00000528516 GNAI2P04899 355 aa21.43■■□□□ 1.02
LTBP3-210ENST00000528516 MBIPQ9NS73 344 aa21.43■■□□□ 1.02
LTBP3-210ENST00000528516 C8orf58Q8NAV2 365 aa21.42■■□□□ 1.02
LTBP3-210ENST00000528516 FAM184AQ8NB25 1140 aa21.42■■□□□ 1.02
LTBP3-210ENST00000528516 PIBF1Q8WXW3 757 aa21.42■■□□□ 1.02
LTBP3-210ENST00000528516 ZKSCAN1P17029 563 aaPredicted RBP21.42■■□□□ 1.02
LTBP3-210ENST00000528516 G3BP1Q13283 466 aaKnown RBP eCLIP21.42■■□□□ 1.02
LTBP3-210ENST00000528516 SF3A1Q15459 793 aaKnown RBP21.42■■□□□ 1.02
LTBP3-210ENST00000528516 PPFIA3O75145 1194 aa21.42■■□□□ 1.02
LTBP3-210ENST00000528516 HSP90AB2PQ58FF8 381 aa21.42■■□□□ 1.02
LTBP3-210ENST00000528516 RIC3Q7Z5B4 369 aa21.42■■□□□ 1.02
LTBP3-210ENST00000528516 CWC27Q6UX04 472 aaKnown RBP21.41■■□□□ 1.02
LTBP3-210ENST00000528516 SRGAP3O43295 1099 aa21.41■■□□□ 1.02
LTBP3-210ENST00000528516 CLEC17AQ6ZS10 378 aa21.41■■□□□ 1.02
LTBP3-210ENST00000528516 ZNF710Q8N1W2 664 aa21.41■■□□□ 1.02
LTBP3-210ENST00000528516 CEP152O94986 1710 aa21.41■■□□□ 1.02
LTBP3-210ENST00000528516 PLCD3Q8N3E9 789 aa21.41■■□□□ 1.02
LTBP3-210ENST00000528516 BICD2Q8TD16 824 aa21.41■■□□□ 1.02
LTBP3-210ENST00000528516 EIF2AK4Q9P2K8 1649 aaKnown RBP21.41■■□□□ 1.02
LTBP3-210ENST00000528516 MYL6BP14649 208 aa21.4■■□□□ 1.02
LTBP3-210ENST00000528516 SYTL4Q96C24 671 aaPredicted RBP21.4■■□□□ 1.02
LTBP3-210ENST00000528516 HCLS1P14317 486 aaPredicted RBP21.4■■□□□ 1.02
LTBP3-210ENST00000528516 FERMT3Q86UX7 667 aa21.4■■□□□ 1.02
LTBP3-210ENST00000528516 STK11IPQ8N1F8 1099 aa21.4■■□□□ 1.02
LTBP3-210ENST00000528516 AK9Q5TCS8 1911 aa21.39■■□□□ 1.02
LTBP3-210ENST00000528516 EFCAB6Q5THR3 1501 aa21.39■■□□□ 1.02
LTBP3-210ENST00000528516 ATAD2Q6PL18 1390 aa21.39■■□□□ 1.02
LTBP3-210ENST00000528516 SPHKAPQ2M3C7 1700 aa21.39■■□□□ 1.01
LTBP3-210ENST00000528516 NEXNQ0ZGT2 675 aa21.38■■□□□ 1.01
LTBP3-210ENST00000528516 ABCA6Q8N139 1617 aa21.38■■□□□ 1.01
LTBP3-210ENST00000528516 CCDC30Q5VVM6 783 aa21.38■■□□□ 1.01
LTBP3-210ENST00000528516 CLASRPQ8N2M8 674 aaKnown RBP21.38■■□□□ 1.01
LTBP3-210ENST00000528516 MEIS3Q99687 375 aa21.38■■□□□ 1.01
LTBP3-210ENST00000528516 ERC2O15083 957 aa21.37■■□□□ 1.01
LTBP3-210ENST00000528516 CCDC85AQ96PX6 553 aaPredicted RBP21.37■■□□□ 1.01
LTBP3-210ENST00000528516 RIOK3O14730 519 aaKnown RBP21.37■■□□□ 1.01
LTBP3-210ENST00000528516 DNAJC2Q99543 621 aaKnown RBP21.37■■□□□ 1.01
LTBP3-210ENST00000528516 USP26Q9BXU7 913 aa21.37■■□□□ 1.01
LTBP3-210ENST00000528516 LRRCC1Q9C099 1032 aa21.37■■□□□ 1.01
LTBP3-210ENST00000528516 GOLGA6L6A8MZA4 724 aa21.36■■□□□ 1.01
LTBP3-210ENST00000528516 GTF2E1P29083 439 aaPredicted RBP21.36■■□□□ 1.01
LTBP3-210ENST00000528516 ABCC3O15438 1527 aa21.36■■□□□ 1.01
LTBP3-210ENST00000528516 GNAI3P08754 354 aa21.36■■□□□ 1.01
LTBP3-210ENST00000528516 ZC3H6P61129 1189 aaKnown RBP21.36■■□□□ 1.01
LTBP3-210ENST00000528516 TTC5Q8N0Z6 440 aa21.36■■□□□ 1.01
LTBP3-210ENST00000528516 PPRC1Q5VV67 1664 aaKnown RBP21.36■■□□□ 1.01
LTBP3-210ENST00000528516 FOXO3O43524 673 aa21.36■■□□□ 1.01
LTBP3-210ENST00000528516 FSD1Q9BTV5 496 aa21.36■■□□□ 1.01
LTBP3-210ENST00000528516 ERICH4A6NGS2 130 aa21.35■■□□□ 1.01
LTBP3-210ENST00000528516 ZBTB22O15209 634 aa21.35■■□□□ 1.01
LTBP3-210ENST00000528516 IFT57Q9NWB7 429 aa21.35■■□□□ 1.01
LTBP3-210ENST00000528516 GSPT1P15170 499 aaKnown RBP21.35■■□□□ 1.01
LTBP3-210ENST00000528516 APPP05067 770 aa21.35■■□□□ 1.01
LTBP3-210ENST00000528516 TAF3Q5VWG9 929 aa21.34■■□□□ 1.01
LTBP3-210ENST00000528516 TMX3Q96JJ7 454 aa21.34■■□□□ 1.01
LTBP3-210ENST00000528516 SYNMO15061 1565 aa21.33■■□□□ 1.01
LTBP3-210ENST00000528516 FRMPD1Q5SYB0 1578 aa21.33■■□□□ 1.01
LTBP3-210ENST00000528516 ZNF530Q6P9A1 599 aaPredicted RBP21.33■■□□□ 1.01
LTBP3-210ENST00000528516 ZDHHC9Q9Y397 364 aa21.33■■□□□ 1.01
LTBP3-210ENST00000528516 GADD45BO75293 160 aaPredicted RBP21.33■■□□□ 1
LTBP3-210ENST00000528516 OTUD7AQ8TE49 926 aaPredicted RBP21.33■■□□□ 1
LTBP3-210ENST00000528516 RNF17Q9BXT8 1623 aaKnown RBP21.33■■□□□ 1
LTBP3-210ENST00000528516 BECN2A8MW95 431 aa21.33■■□□□ 1
LTBP3-210ENST00000528516 FMNL2Q96PY5 1086 aa21.33■■□□□ 1
LTBP3-210ENST00000528516 RUFY2Q8WXA3 655 aa21.32■■□□□ 1
LTBP3-210ENST00000528516 PHF23Q9BUL5 403 aaPredicted RBP21.32■■□□□ 1
LTBP3-210ENST00000528516 TTC22Q5TAA0 569 aa21.32■■□□□ 1
LTBP3-210ENST00000528516 PLEKHM2Q8IWE5 1019 aa21.32■■□□□ 1
LTBP3-210ENST00000528516 DIP2CQ9Y2E4 1556 aa21.32■■□□□ 1
LTBP3-210ENST00000528516 POLKQ9UBT6 870 aa21.32■■□□□ 1
LTBP3-210ENST00000528516 CYP2E1P05181 493 aaPredicted RBP21.31■■□□□ 1
LTBP3-210ENST00000528516 RAPGEF4Q8WZA2 1011 aa21.31■■□□□ 1
LTBP3-210ENST00000528516 TRERF1Q96PN7 1200 aa21.31■■□□□ 1
LTBP3-210ENST00000528516 LRRFIP2Q9Y608 721 aaKnown RBP21.31■■□□□ 1
LTBP3-210ENST00000528516 ZBTB7BO15156 539 aaPredicted RBP21.31■■□□□ 1
LTBP3-210ENST00000528516 MROH1Q8NDA8 1641 aa21.31■■□□□ 1
LTBP3-210ENST00000528516 SDSP20132 328 aa21.3■■□□□ 1
LTBP3-210ENST00000528516 C16orf45Q96MC5 204 aaPredicted RBP21.3■■□□□ 1
LTBP3-210ENST00000528516 SRCIN1Q9C0H9 1055 aa21.3■■□□□ 1
LTBP3-210ENST00000528516 SPG7Q9UQ90 795 aa21.3■■□□□ 1
LTBP3-210ENST00000528516 USP48Q86UV5 1035 aa21.3■■□□□ 1
LTBP3-210ENST00000528516 MPRIPQ6WCQ1 1025 aa21.29■■□□□ 1
LTBP3-210ENST00000528516 ABCC11Q96J66 1382 aa21.29■■□□□ 1
LTBP3-210ENST00000528516 TRIM35Q9UPQ4 493 aa21.29■■□□□ 1
LTBP3-210ENST00000528516 CCDC66A2RUB6 948 aa21.28■■□□□ 1
LTBP3-210ENST00000528516 NRDCO43847 1150 aa21.28■■□□□ 1
LTBP3-210ENST00000528516 TAF7Q15545 349 aaPredicted RBP21.28■■□□□ 1
LTBP3-210ENST00000528516 ATP6V1DQ9Y5K8 247 aa21.28■■□□□ 1
LTBP3-210ENST00000528516 KIF1BO60333 1816 aa21.28■■□□□ 1
LTBP3-210ENST00000528516 WASLO00401 505 aaPredicted RBP21.28■■□□□ 1
LTBP3-210ENST00000528516 GOLGA6L19H0YKK7 550 aa21.28■■□□□ 1
LTBP3-210ENST00000528516 CHMP4CQ96CF2 233 aa21.28■■□□□ 1
LTBP3-210ENST00000528516 TCEANC2Q96MN5 208 aa21.28■■□□□ 1
LTBP3-210ENST00000528516 DIP2BQ9P265 1576 aa21.27■■□□□ 1
LTBP3-210ENST00000528516 ALDH1L2Q3SY69 923 aa21.27■■□□□ 1
LTBP3-210ENST00000528516 ATP2B1P20020 1258 aa21.27■■□□□ 1
LTBP3-210ENST00000528516 UVSSAQ2YD98 709 aa21.27■■□□□ 1
LTBP3-210ENST00000528516 CCDC183Q5T5S1 534 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms