RNA–Protein interactions for RNA: ENST00000528496.1

AP003063.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP003063.1, Length 855 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003063.1-201ENST00000528496 SEPT12Q8IYM1 358 aa11.79□□□□□ -0.52
AP003063.1-201ENST00000528496 PANK1Q8TE04 598 aa11.79□□□□□ -0.52
AP003063.1-201ENST00000528496 CFAP44Q96MT7 982 aa11.79□□□□□ -0.52
AP003063.1-201ENST00000528496 RWDD1Q9H446 243 aaPredicted RBP11.79□□□□□ -0.52
AP003063.1-201ENST00000528496 TERF2IPQ9NYB0 399 aa11.79□□□□□ -0.52
AP003063.1-201ENST00000528496 TTLL13PA6NNM8 815 aa11.78□□□□□ -0.52
AP003063.1-201ENST00000528496 BECN1Q14457 450 aa11.78□□□□□ -0.52
AP003063.1-201ENST00000528496 LCE2DQ5TA82 110 aaPredicted RBP11.78□□□□□ -0.52
AP003063.1-201ENST00000528496 PAXIP1Q6ZW49 1069 aaPredicted RBP11.78□□□□□ -0.52
AP003063.1-201ENST00000528496 USP19O94966 1318 aa11.78□□□□□ -0.52
AP003063.1-201ENST00000528496 NRKQ7Z2Y5 1582 aa11.77□□□□□ -0.53
AP003063.1-201ENST00000528496 ONECUT3O60422 494 aaPredicted RBP11.77□□□□□ -0.53
AP003063.1-201ENST00000528496 U2AF1L5P0DN76 240 aaPredicted RBP11.77□□□□□ -0.53
AP003063.1-201ENST00000528496 NLRP6P59044 892 aa11.77□□□□□ -0.53
AP003063.1-201ENST00000528496 U2AF1Q01081 240 aaKnown RBP eCLIP11.77□□□□□ -0.53
AP003063.1-201ENST00000528496 MVPQ14764 893 aaKnown RBP11.77□□□□□ -0.53
AP003063.1-201ENST00000528496 NFKBIBQ15653 356 aa11.77□□□□□ -0.53
AP003063.1-201ENST00000528496 CHRNA2Q15822 529 aa11.77□□□□□ -0.53
AP003063.1-201ENST00000528496 ZKSCAN2Q63HK3 967 aa11.77□□□□□ -0.53
AP003063.1-201ENST00000528496 CCDC125Q86Z20 511 aa11.77□□□□□ -0.53
AP003063.1-201ENST00000528496 GCP02774 474 aa11.76□□□□□ -0.53
AP003063.1-201ENST00000528496 TNNT2P45379 298 aaPredicted RBP11.76□□□□□ -0.53
AP003063.1-201ENST00000528496 EVA1CP58658 441 aa11.76□□□□□ -0.53
AP003063.1-201ENST00000528496 FAM98CQ17RN3 349 aaKnown RBP11.76□□□□□ -0.53
AP003063.1-201ENST00000528496 FRAT1Q92837 279 aaPredicted RBP11.76□□□□□ -0.53
AP003063.1-201ENST00000528496 PLEKHF1Q96S99 279 aa11.76□□□□□ -0.53
AP003063.1-201ENST00000528496 STRN4Q9NRL3 753 aa11.76□□□□□ -0.53
AP003063.1-201ENST00000528496 RRP7AQ9Y3A4 280 aaKnown RBP11.76□□□□□ -0.53
AP003063.1-201ENST00000528496 MON2Q7Z3U7 1717 aa11.76□□□□□ -0.53
AP003063.1-201ENST00000528496 SPATA31A5Q5VU36 1347 aa11.76□□□□□ -0.53
AP003063.1-201ENST00000528496 SPATA31A7Q8IWB4 1347 aa11.76□□□□□ -0.53
AP003063.1-201ENST00000528496 CPDO75976 1380 aa11.76□□□□□ -0.53
AP003063.1-201ENST00000528496 AKAP12Q02952 1782 aa11.75□□□□□ -0.53
AP003063.1-201ENST00000528496 MAP2P11137 1827 aaKnown RBP11.75□□□□□ -0.53
AP003063.1-201ENST00000528496 MKRN3Q13064 507 aaKnown RBP11.75□□□□□ -0.53
AP003063.1-201ENST00000528496 NEUROD2Q15784 382 aa11.75□□□□□ -0.53
AP003063.1-201ENST00000528496 KRT27Q7Z3Y8 459 aa11.75□□□□□ -0.53
AP003063.1-201ENST00000528496 HDGFL2Q7Z4V5 671 aaPredicted RBP11.75□□□□□ -0.53
AP003063.1-201ENST00000528496 EFCAB3Q8N7B9 438 aa11.75□□□□□ -0.53
AP003063.1-201ENST00000528496 UPF2Q9HAU5 1272 aaKnown RBP11.75□□□□□ -0.53
AP003063.1-201ENST00000528496 TTC21BQ7Z4L5 1316 aa11.75□□□□□ -0.53
AP003063.1-201ENST00000528496 TTC21AQ8NDW8 1320 aa11.75□□□□□ -0.53
AP003063.1-201ENST00000528496 SSH2Q76I76 1423 aa11.75□□□□□ -0.53
AP003063.1-201ENST00000528496 BRWD3Q6RI45 1802 aa11.74□□□□□ -0.53
AP003063.1-201ENST00000528496 ZBTB7CA1YPR0 619 aa11.74□□□□□ -0.53
AP003063.1-201ENST00000528496 TMPOP42166 694 aaKnown RBP11.74□□□□□ -0.53
AP003063.1-201ENST00000528496 DZIP1LQ8IYY4 767 aaKnown RBP11.74□□□□□ -0.53
AP003063.1-201ENST00000528496 SPRYD3Q8NCJ5 442 aa11.74□□□□□ -0.53
AP003063.1-201ENST00000528496 FAM163AQ96GL9 167 aaPredicted RBP11.74□□□□□ -0.53
AP003063.1-201ENST00000528496 TRIM35Q9UPQ4 493 aa11.74□□□□□ -0.53
AP003063.1-201ENST00000528496 CPSF1Q10570 1443 aaKnown RBP11.74□□□□□ -0.53
AP003063.1-201ENST00000528496 PIK3C2AO00443 1686 aa11.73□□□□□ -0.53
AP003063.1-201ENST00000528496 SLIT3O75094 1523 aa11.73□□□□□ -0.53
AP003063.1-201ENST00000528496 RLBP1P12271 317 aa11.73□□□□□ -0.53
AP003063.1-201ENST00000528496 SF3B2Q13435 895 aaKnown RBP11.73□□□□□ -0.53
AP003063.1-201ENST00000528496 SPATA31A1Q5TZJ5 1347 aa11.73□□□□□ -0.53
AP003063.1-201ENST00000528496 ZNF428Q96B54 188 aa11.73□□□□□ -0.53
AP003063.1-201ENST00000528496 KIF16BQ96L93 1317 aa11.73□□□□□ -0.53
AP003063.1-201ENST00000528496 DDX19BQ9UMR2 479 aa11.73□□□□□ -0.53
AP003063.1-201ENST00000528496 PDZRN3Q9UPQ7 1066 aa11.73□□□□□ -0.53
AP003063.1-201ENST00000528496 PCDHB15Q9Y5E8 787 aa11.73□□□□□ -0.53
AP003063.1-201ENST00000528496 ATN1P54259 1190 aaPredicted RBP11.72□□□□□ -0.53
AP003063.1-201ENST00000528496 HDAC1Q13547 482 aaPredicted RBP11.72□□□□□ -0.53
AP003063.1-201ENST00000528496 NKX1-1Q15270 411 aaPredicted RBP11.72□□□□□ -0.53
AP003063.1-201ENST00000528496 FTSJ3Q8IY81 847 aaKnown RBP11.72□□□□□ -0.53
AP003063.1-201ENST00000528496 KCNH5Q8NCM2 988 aa11.72□□□□□ -0.53
AP003063.1-201ENST00000528496 LMO7Q8WWI1 1683 aa11.71□□□□□ -0.53
AP003063.1-201ENST00000528496 CAMTA1Q9Y6Y1 1673 aa11.71□□□□□ -0.53
AP003063.1-201ENST00000528496 FYB1O15117 783 aa11.71□□□□□ -0.53
AP003063.1-201ENST00000528496 ATMINO43313 823 aaPredicted RBP11.71□□□□□ -0.53
AP003063.1-201ENST00000528496 DIAPH1O60610 1272 aaKnown RBP11.71□□□□□ -0.53
AP003063.1-201ENST00000528496 BRPF1P55201 1214 aaPredicted RBP11.71□□□□□ -0.53
AP003063.1-201ENST00000528496 ALDH1L2Q3SY69 923 aa11.71□□□□□ -0.53
AP003063.1-201ENST00000528496 TBC1D32Q96NH3 1257 aa11.71□□□□□ -0.53
AP003063.1-201ENST00000528496 DLG5Q8TDM6 1919 aa11.7□□□□□ -0.54
AP003063.1-201ENST00000528496 AATKQ6ZMQ8 1374 aa11.7□□□□□ -0.54
AP003063.1-201ENST00000528496 IPO8O15397 1037 aaKnown RBP11.7□□□□□ -0.54
AP003063.1-201ENST00000528496 PLCB2Q00722 1185 aa11.7□□□□□ -0.54
AP003063.1-201ENST00000528496 LARP1Q6PKG0 1096 aaKnown RBP11.7□□□□□ -0.54
AP003063.1-201ENST00000528496 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.7□□□□□ -0.54
AP003063.1-201ENST00000528496 CHMP4BQ9H444 224 aaKnown RBP11.7□□□□□ -0.54
AP003063.1-201ENST00000528496 SMC4Q9NTJ3 1288 aa11.7□□□□□ -0.54
AP003063.1-201ENST00000528496 THSD7AQ9UPZ6 1657 aa11.7□□□□□ -0.54
AP003063.1-201ENST00000528496 COL5A2P05997 1499 aaPredicted RBP11.7□□□□□ -0.54
AP003063.1-201ENST00000528496 EDC4Q6P2E9 1401 aaKnown RBP11.69□□□□□ -0.54
AP003063.1-201ENST00000528496 U2SURPO15042 1029 aaKnown RBP11.69□□□□□ -0.54
AP003063.1-201ENST00000528496 SOX12O15370 315 aa11.69□□□□□ -0.54
AP003063.1-201ENST00000528496 FCHSD2O94868 740 aa11.69□□□□□ -0.54
AP003063.1-201ENST00000528496 SLC4A3P48751 1232 aa11.69□□□□□ -0.54
AP003063.1-201ENST00000528496 CALD1Q05682 793 aaKnown RBP11.69□□□□□ -0.54
AP003063.1-201ENST00000528496 EXOSC9Q06265 439 aaKnown RBP11.69□□□□□ -0.54
AP003063.1-201ENST00000528496 ASTLQ6HA08 431 aaPredicted RBP11.69□□□□□ -0.54
AP003063.1-201ENST00000528496 ATF7IPQ6VMQ6 1270 aa11.69□□□□□ -0.54
AP003063.1-201ENST00000528496 BARGINQ6ZT62 677 aa11.69□□□□□ -0.54
AP003063.1-201ENST00000528496 GGNBP2Q9H3C7 697 aa11.69□□□□□ -0.54
AP003063.1-201ENST00000528496 RYDENQ9NUL5 291 aaKnown RBP11.68□□□□□ -0.54
AP003063.1-201ENST00000528496 TNNQ9UQP3 1299 aa11.68□□□□□ -0.54
AP003063.1-201ENST00000528496 THRAP3Q9Y2W1 955 aaKnown RBP11.68□□□□□ -0.54
AP003063.1-201ENST00000528496 CRB1P82279 1406 aa11.68□□□□□ -0.54
AP003063.1-201ENST00000528496 EP400Q96L91 3159 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms