RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 LY75O60449 1722 aa12.2□□□□□ -0.46
CMTM1-210ENST00000528441 NCAPD2Q15021 1401 aa12.2□□□□□ -0.46
CMTM1-210ENST00000528441 PHF14O94880 888 aa12.19□□□□□ -0.46
CMTM1-210ENST00000528441 IL13P35225 146 aa12.19□□□□□ -0.46
CMTM1-210ENST00000528441 PIGBQ92521 554 aa12.19□□□□□ -0.46
CMTM1-210ENST00000528441 CASZ1Q86V15 1759 aa12.19□□□□□ -0.46
CMTM1-210ENST00000528441 PER1O15534 1290 aaPredicted RBP12.18□□□□□ -0.46
CMTM1-210ENST00000528441 DCAF5Q96JK2 942 aa12.18□□□□□ -0.46
CMTM1-210ENST00000528441 NUDCQ9Y266 331 aa12.18□□□□□ -0.46
CMTM1-210ENST00000528441 PAPPAQ13219 1627 aa12.18□□□□□ -0.46
CMTM1-210ENST00000528441 C5P01031 1676 aa12.17□□□□□ -0.46
CMTM1-210ENST00000528441 ATP6V1AP38606 617 aa12.17□□□□□ -0.46
CMTM1-210ENST00000528441 LOC102724428A0A0B4J2F2 783 aa12.16□□□□□ -0.46
CMTM1-210ENST00000528441 NEFMP07197 916 aa12.16□□□□□ -0.46
CMTM1-210ENST00000528441 SIK1P57059 783 aa12.16□□□□□ -0.46
CMTM1-210ENST00000528441 NKX1-1Q15270 411 aaPredicted RBP12.16□□□□□ -0.46
CMTM1-210ENST00000528441 AKT1S1Q96B36 256 aa12.16□□□□□ -0.46
CMTM1-210ENST00000528441 NPC1L1Q9UHC9 1359 aa12.16□□□□□ -0.46
CMTM1-210ENST00000528441 ERVV-2B6SEH9 535 aa12.15□□□□□ -0.46
CMTM1-210ENST00000528441 AKAP4Q5JQC9 854 aa12.15□□□□□ -0.46
CMTM1-210ENST00000528441 MSL1Q68DK7 614 aa12.15□□□□□ -0.46
CMTM1-210ENST00000528441 PELP1Q8IZL8 1130 aaKnown RBP12.15□□□□□ -0.46
CMTM1-210ENST00000528441 ARXQ96QS3 562 aa12.15□□□□□ -0.46
CMTM1-210ENST00000528441 ASAP1Q9ULH1 1129 aa12.15□□□□□ -0.46
CMTM1-210ENST00000528441 PLEKHG2Q9H7P9 1386 aa12.15□□□□□ -0.46
CMTM1-210ENST00000528441 PNPLA7Q6ZV29 1317 aa12.14□□□□□ -0.47
CMTM1-210ENST00000528441 TUBGCP6Q96RT7 1819 aa12.14□□□□□ -0.47
CMTM1-210ENST00000528441 U2AF1L5P0DN76 240 aaPredicted RBP12.14□□□□□ -0.47
CMTM1-210ENST00000528441 U2AF1Q01081 240 aaKnown RBP eCLIP12.14□□□□□ -0.47
CMTM1-210ENST00000528441 FLAD1Q8NFF5 587 aa12.14□□□□□ -0.47
CMTM1-210ENST00000528441 SLC16A10Q8TF71 515 aa12.14□□□□□ -0.47
CMTM1-210ENST00000528441 SPDYE2BA6NHP3 402 aa12.13□□□□□ -0.47
CMTM1-210ENST00000528441 GNPATO15228 680 aa12.13□□□□□ -0.47
CMTM1-210ENST00000528441 PTCD1O75127 700 aaKnown RBP12.13□□□□□ -0.47
CMTM1-210ENST00000528441 SPDYE6P0CI01 402 aa12.13□□□□□ -0.47
CMTM1-210ENST00000528441 SPDYE2Q495Y8 402 aa12.13□□□□□ -0.47
CMTM1-210ENST00000528441 ATG3Q9NT62 314 aa12.13□□□□□ -0.47
CMTM1-210ENST00000528441 C4BP0C0L5 1744 aa12.13□□□□□ -0.47
CMTM1-210ENST00000528441 QSER1Q2KHR3 1735 aa12.13□□□□□ -0.47
CMTM1-210ENST00000528441 TAF1LQ8IZX4 1826 aa12.13□□□□□ -0.47
CMTM1-210ENST00000528441 PPP2R1AP30153 589 aa12.12□□□□□ -0.47
CMTM1-210ENST00000528441 NFATC2IPQ8NCF5 419 aa12.12□□□□□ -0.47
CMTM1-210ENST00000528441 GAS2L2Q8NHY3 880 aa12.12□□□□□ -0.47
CMTM1-210ENST00000528441 FHDC1Q9C0D6 1143 aaPredicted RBP12.12□□□□□ -0.47
CMTM1-210ENST00000528441 KDRP35968 1356 aa12.12□□□□□ -0.47
CMTM1-210ENST00000528441 KDM6AO15550 1401 aaPredicted RBP12.11□□□□□ -0.47
CMTM1-210ENST00000528441 TEFQ10587 303 aa12.11□□□□□ -0.47
CMTM1-210ENST00000528441 DDX10Q13206 875 aaKnown RBP12.11□□□□□ -0.47
CMTM1-210ENST00000528441 MTHFSDQ2M296 383 aaKnown RBP12.11□□□□□ -0.47
CMTM1-210ENST00000528441 COL23A1Q86Y22 540 aaPredicted RBP12.11□□□□□ -0.47
CMTM1-210ENST00000528441 TTC5Q8N0Z6 440 aa12.11□□□□□ -0.47
CMTM1-210ENST00000528441 LINC00116Q8NCU8 138 aa12.11□□□□□ -0.47
CMTM1-210ENST00000528441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.1□□□□□ -0.47
CMTM1-210ENST00000528441 PRKAR2BP31323 418 aa12.1□□□□□ -0.47
CMTM1-210ENST00000528441 ZEB1P37275 1124 aaPredicted RBP12.1□□□□□ -0.47
CMTM1-210ENST00000528441 PTGER2P43116 358 aa12.1□□□□□ -0.47
CMTM1-210ENST00000528441 RTF1Q92541 710 aaKnown RBP12.1□□□□□ -0.47
CMTM1-210ENST00000528441 RTCBQ9Y3I0 505 aaKnown RBP12.1□□□□□ -0.47
CMTM1-210ENST00000528441 SCN11AQ9UI33 1791 aa12.1□□□□□ -0.47
CMTM1-210ENST00000528441 VIRMAQ69YN4 1812 aaKnown RBP12.09□□□□□ -0.47
CMTM1-210ENST00000528441 RNMTO43148 476 aaKnown RBP12.09□□□□□ -0.47
CMTM1-210ENST00000528441 COL3A1P02461 1466 aaPredicted RBP12.08□□□□□ -0.47
CMTM1-210ENST00000528441 MAP3K5Q99683 1374 aa12.08□□□□□ -0.48
CMTM1-210ENST00000528441 GNAT3A8MTJ3 354 aa12.08□□□□□ -0.48
CMTM1-210ENST00000528441 SSFA2P28290 1259 aa12.08□□□□□ -0.48
CMTM1-210ENST00000528441 ITPK1Q13572 414 aa12.08□□□□□ -0.48
CMTM1-210ENST00000528441 GPR162Q16538 588 aa12.08□□□□□ -0.48
CMTM1-210ENST00000528441 SMIM5Q71RC9 77 aa12.08□□□□□ -0.48
CMTM1-210ENST00000528441 SLC52A2Q9HAB3 445 aa12.08□□□□□ -0.48
CMTM1-210ENST00000528441 LGR6Q9HBX8 967 aa12.08□□□□□ -0.48
CMTM1-210ENST00000528441 SRCAPQ6ZRS2 3230 aa12.08□□□□□ -0.48
CMTM1-210ENST00000528441 RFC4P35249 363 aa12.07□□□□□ -0.48
CMTM1-210ENST00000528441 SLC39A6Q13433 755 aa12.07□□□□□ -0.48
CMTM1-210ENST00000528441 TRAPPC3LQ5T215 181 aa12.07□□□□□ -0.48
CMTM1-210ENST00000528441 NPM2Q86SE8 214 aaKnown RBP12.07□□□□□ -0.48
CMTM1-210ENST00000528441 SYT17Q9BSW7 474 aa12.07□□□□□ -0.48
CMTM1-210ENST00000528441 MAPK8IP3Q9UPT6 1336 aa12.07□□□□□ -0.48
CMTM1-210ENST00000528441 ZNF330Q9Y3S2 320 aaPredicted RBP12.06□□□□□ -0.48
CMTM1-210ENST00000528441 UBR3Q6ZT12 1888 aa12.06□□□□□ -0.48
CMTM1-210ENST00000528441 YY1P25490 414 aa12.05□□□□□ -0.48
CMTM1-210ENST00000528441 RALBP1Q15311 655 aa12.04□□□□□ -0.48
CMTM1-210ENST00000528441 DNAJC10Q8IXB1 793 aa12.04□□□□□ -0.48
CMTM1-210ENST00000528441 RSPH6AQ9H0K4 717 aa12.04□□□□□ -0.48
CMTM1-210ENST00000528441 PNNQ9H307 717 aaKnown RBP12.04□□□□□ -0.48
CMTM1-210ENST00000528441 CNTNAP4Q9C0A0 1308 aa12.04□□□□□ -0.48
CMTM1-210ENST00000528441 CRKLP46109 303 aaKnown RBP12.03□□□□□ -0.48
CMTM1-210ENST00000528441 SGIP1Q9BQI5 828 aa12.03□□□□□ -0.48
CMTM1-210ENST00000528441 WWC3Q9ULE0 1092 aa12.03□□□□□ -0.48
CMTM1-210ENST00000528441 BTBD11A6QL63 1104 aa12.02□□□□□ -0.49
CMTM1-210ENST00000528441 ZPR1O75312 459 aa12.02□□□□□ -0.49
CMTM1-210ENST00000528441 FCHSD2O94868 740 aa12.02□□□□□ -0.49
CMTM1-210ENST00000528441 WDR43Q15061 677 aaKnown RBP eCLIP12.02□□□□□ -0.49
CMTM1-210ENST00000528441 REM2Q8IYK8 340 aaPredicted RBP12.02□□□□□ -0.49
CMTM1-210ENST00000528441 PHACTR3Q96KR7 559 aa12.02□□□□□ -0.49
CMTM1-210ENST00000528441 SLC4A9Q96Q91 983 aa12.02□□□□□ -0.49
CMTM1-210ENST00000528441 COL5A3P25940 1745 aaPredicted RBP12.02□□□□□ -0.49
CMTM1-210ENST00000528441 RPS6KA4O75676 772 aa12.01□□□□□ -0.49
CMTM1-210ENST00000528441 STARD3NLO95772 234 aa12.01□□□□□ -0.49
CMTM1-210ENST00000528441 MMP10P09238 476 aa12.01□□□□□ -0.49
CMTM1-210ENST00000528441 CANXP27824 592 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms