RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 KDM3BQ7LBC6 1761 aa18.51■□□□□ 0.55
ECHDC1-220ENST00000528402 EIF5BO60841 1220 aaKnown RBP18.5■□□□□ 0.55
ECHDC1-220ENST00000528402 EIF4A1P60842 406 aaKnown RBP18.5■□□□□ 0.55
ECHDC1-220ENST00000528402 SPG7Q9UQ90 795 aa18.5■□□□□ 0.55
ECHDC1-220ENST00000528402 TATP17735 454 aaPredicted RBP18.49■□□□□ 0.55
ECHDC1-220ENST00000528402 FLIIQ13045 1269 aa18.49■□□□□ 0.55
ECHDC1-220ENST00000528402 BRINP3Q76B58 766 aa18.49■□□□□ 0.55
ECHDC1-220ENST00000528402 DCTPP1Q9H773 170 aa18.49■□□□□ 0.55
ECHDC1-220ENST00000528402 LGR6Q9HBX8 967 aa18.49■□□□□ 0.55
ECHDC1-220ENST00000528402 SLAIN2Q9P270 581 aa18.49■□□□□ 0.55
ECHDC1-220ENST00000528402 BTBD11A6QL63 1104 aa18.49■□□□□ 0.55
ECHDC1-220ENST00000528402 HMMRO75330 724 aa18.49■□□□□ 0.55
ECHDC1-220ENST00000528402 GNAI3P08754 354 aa18.49■□□□□ 0.55
ECHDC1-220ENST00000528402 PXDNLA1KZ92 1463 aa18.48■□□□□ 0.55
ECHDC1-220ENST00000528402 CRYBG1Q9Y4K1 1723 aa18.48■□□□□ 0.55
ECHDC1-220ENST00000528402 ADAMTS7Q9UKP4 1686 aa18.48■□□□□ 0.55
ECHDC1-220ENST00000528402 SOS2Q07890 1332 aaPredicted RBP18.48■□□□□ 0.55
ECHDC1-220ENST00000528402 HDGFL1Q5TGJ6 251 aa18.48■□□□□ 0.55
ECHDC1-220ENST00000528402 ANKRD45Q5TZF3 282 aa18.47■□□□□ 0.55
ECHDC1-220ENST00000528402 SIRT2Q8IXJ6 389 aa18.47■□□□□ 0.55
ECHDC1-220ENST00000528402 NLRP2Q9NX02 1062 aa18.47■□□□□ 0.55
ECHDC1-220ENST00000528402 FKBP5Q13451 457 aaPredicted RBP18.46■□□□□ 0.55
ECHDC1-220ENST00000528402 G2E3Q7L622 706 aa18.46■□□□□ 0.55
ECHDC1-220ENST00000528402 DAXXQ9UER7 740 aaPredicted RBP18.46■□□□□ 0.55
ECHDC1-220ENST00000528402 N4BP2Q86UW6 1770 aaPredicted RBP18.46■□□□□ 0.55
ECHDC1-220ENST00000528402 HSP90AB1P08238 724 aaKnown RBP18.45■□□□□ 0.54
ECHDC1-220ENST00000528402 MPRIPQ6WCQ1 1025 aa18.45■□□□□ 0.54
ECHDC1-220ENST00000528402 C1orf115Q9H7X2 142 aa18.45■□□□□ 0.54
ECHDC1-220ENST00000528402 GNAI2P04899 355 aa18.44■□□□□ 0.54
ECHDC1-220ENST00000528402 CSB-PGBD3P0DP91 1061 aa18.44■□□□□ 0.54
ECHDC1-220ENST00000528402 CEP85Q6P2H3 762 aa18.44■□□□□ 0.54
ECHDC1-220ENST00000528402 DDX17Q92841 729 aaKnown RBP18.44■□□□□ 0.54
ECHDC1-220ENST00000528402 SIPA1L3O60292 1781 aaPredicted RBP18.43■□□□□ 0.54
ECHDC1-220ENST00000528402 BMP2KLQ5H9B9 411 aa18.43■□□□□ 0.54
ECHDC1-220ENST00000528402 SLC4A10Q6U841 1118 aa18.43■□□□□ 0.54
ECHDC1-220ENST00000528402 IFNL2Q8IZJ0 200 aa18.43■□□□□ 0.54
ECHDC1-220ENST00000528402 LNPKQ9C0E8 428 aa18.43■□□□□ 0.54
ECHDC1-220ENST00000528402 HEG1Q9ULI3 1381 aa18.43■□□□□ 0.54
ECHDC1-220ENST00000528402 PLEKHG5O94827 1062 aa18.42■□□□□ 0.54
ECHDC1-220ENST00000528402 DBF4Q9UBU7 674 aaPredicted RBP18.42■□□□□ 0.54
ECHDC1-220ENST00000528402 ATP10DQ9P241 1426 aa18.42■□□□□ 0.54
ECHDC1-220ENST00000528402 ZNF335Q9H4Z2 1342 aaPredicted RBP18.42■□□□□ 0.54
ECHDC1-220ENST00000528402 MEIS3Q99687 375 aa18.41■□□□□ 0.54
ECHDC1-220ENST00000528402 HDAC5Q9UQL6 1122 aa18.41■□□□□ 0.54
ECHDC1-220ENST00000528402 SCN11AQ9UI33 1791 aa18.41■□□□□ 0.54
ECHDC1-220ENST00000528402 PHKG2P15735 406 aa18.4■□□□□ 0.54
ECHDC1-220ENST00000528402 F6X3S4 739 aa18.39■□□□□ 0.53
ECHDC1-220ENST00000528402 GIGYF1O75420 1035 aaPredicted RBP18.39■□□□□ 0.53
ECHDC1-220ENST00000528402 CABLES1Q8TDN4 633 aa18.39■□□□□ 0.53
ECHDC1-220ENST00000528402 DCAF5Q96JK2 942 aa18.39■□□□□ 0.53
ECHDC1-220ENST00000528402 SLC52A2Q9HAB3 445 aa18.39■□□□□ 0.53
ECHDC1-220ENST00000528402 PKD1L3Q7Z443 1732 aa18.38■□□□□ 0.53
ECHDC1-220ENST00000528402 EIF2S2P20042 333 aaKnown RBP18.38■□□□□ 0.53
ECHDC1-220ENST00000528402 ATP8B2P98198 1209 aa18.38■□□□□ 0.53
ECHDC1-220ENST00000528402 BECN1Q14457 450 aa18.38■□□□□ 0.53
ECHDC1-220ENST00000528402 TBC1D32Q96NH3 1257 aa18.38■□□□□ 0.53
ECHDC1-220ENST00000528402 HYPKQ9NX55 129 aa18.38■□□□□ 0.53
ECHDC1-220ENST00000528402 SRCIN1Q9C0H9 1055 aa18.37■□□□□ 0.53
ECHDC1-220ENST00000528402 WDR17Q8IZU2 1322 aa18.36■□□□□ 0.53
ECHDC1-220ENST00000528402 SEC24BO95487 1268 aa18.36■□□□□ 0.53
ECHDC1-220ENST00000528402 NECTIN2Q92692 538 aa18.36■□□□□ 0.53
ECHDC1-220ENST00000528402 PRDM11Q9NQV5 511 aa18.36■□□□□ 0.53
ECHDC1-220ENST00000528402 KCNQ3O43525 872 aa18.35■□□□□ 0.53
ECHDC1-220ENST00000528402 CHRNA2Q15822 529 aa18.35■□□□□ 0.53
ECHDC1-220ENST00000528402 DNAAF4Q8WXU2 420 aa18.35■□□□□ 0.53
ECHDC1-220ENST00000528402 CHPF2Q9P2E5 772 aa18.35■□□□□ 0.53
ECHDC1-220ENST00000528402 NHSL1Q5SYE7 1610 aa18.35■□□□□ 0.53
ECHDC1-220ENST00000528402 IBTKQ9P2D0 1353 aaPredicted RBP18.34■□□□□ 0.53
ECHDC1-220ENST00000528402 UBTFL1P0CB47 393 aaPredicted RBP18.34■□□□□ 0.53
ECHDC1-220ENST00000528402 ZNF790Q6PG37 636 aa18.34■□□□□ 0.53
ECHDC1-220ENST00000528402 PHAXQ9H814 394 aaKnown RBP18.34■□□□□ 0.53
ECHDC1-220ENST00000528402 PARP4Q9UKK3 1724 aaKnown RBP18.34■□□□□ 0.53
ECHDC1-220ENST00000528402 MRC1P22897 1456 aa18.34■□□□□ 0.53
ECHDC1-220ENST00000528402 MEGF6O75095 1541 aa18.33■□□□□ 0.53
ECHDC1-220ENST00000528402 ALDH1L1O75891 902 aa18.33■□□□□ 0.53
ECHDC1-220ENST00000528402 DDX58O95786 925 aaKnown RBP18.33■□□□□ 0.53
ECHDC1-220ENST00000528402 PLEKHM2Q8IWE5 1019 aa18.33■□□□□ 0.53
ECHDC1-220ENST00000528402 USP44Q9H0E7 712 aa18.33■□□□□ 0.53
ECHDC1-220ENST00000528402 CARD10Q9BWT7 1032 aa18.32■□□□□ 0.52
ECHDC1-220ENST00000528402 DDX21Q9NR30 783 aaKnown RBP eCLIP18.32■□□□□ 0.52
ECHDC1-220ENST00000528402 KDM6AO15550 1401 aaPredicted RBP18.32■□□□□ 0.52
ECHDC1-220ENST00000528402 BEND3Q5T5X7 828 aa18.32■□□□□ 0.52
ECHDC1-220ENST00000528402 KSR2Q6VAB6 950 aa18.32■□□□□ 0.52
ECHDC1-220ENST00000528402 C22orf23Q9BZE7 217 aa18.32■□□□□ 0.52
ECHDC1-220ENST00000528402 PI4KAP2A4QPH2 592 aa18.31■□□□□ 0.52
ECHDC1-220ENST00000528402 PI4KAP1Q8N8J0 262 aa18.31■□□□□ 0.52
ECHDC1-220ENST00000528402 OSBPL3Q9H4L5 887 aa18.31■□□□□ 0.52
ECHDC1-220ENST00000528402 PCDH11XQ9BZA7 1347 aa18.3■□□□□ 0.52
ECHDC1-220ENST00000528402 PCDH11YQ9BZA8 1340 aa18.3■□□□□ 0.52
ECHDC1-220ENST00000528402 RAB11FIP3O75154 756 aa18.3■□□□□ 0.52
ECHDC1-220ENST00000528402 TOM1L2Q6ZVM7 507 aa18.3■□□□□ 0.52
ECHDC1-220ENST00000528402 TTC5Q8N0Z6 440 aa18.3■□□□□ 0.52
ECHDC1-220ENST00000528402 ABCA3Q99758 1704 aa18.29■□□□□ 0.52
ECHDC1-220ENST00000528402 COL5A2P05997 1499 aaPredicted RBP18.29■□□□□ 0.52
ECHDC1-220ENST00000528402 CYP27B1O15528 508 aa18.29■□□□□ 0.52
ECHDC1-220ENST00000528402 CDC45O75419 566 aa18.29■□□□□ 0.52
ECHDC1-220ENST00000528402 SNRPA1P09661 255 aaKnown RBP18.29■□□□□ 0.52
ECHDC1-220ENST00000528402 TTC22Q5TAA0 569 aa18.29■□□□□ 0.52
ECHDC1-220ENST00000528402 NFATC2IPQ8NCF5 419 aa18.29■□□□□ 0.52
ECHDC1-220ENST00000528402 ZCRB1Q8TBF4 217 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms