RNA–Protein interactions for RNA: ENST00000528324.5

CMTM1-209, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 749 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-209ENST00000528324 PIGBQ92521 554 aa18.42■□□□□ 0.54
CMTM1-209ENST00000528324 TOGARAM1Q9Y4F4 1720 aa18.42■□□□□ 0.54
CMTM1-209ENST00000528324 MRC1P22897 1456 aa18.41■□□□□ 0.54
CMTM1-209ENST00000528324 DCTN1Q14203 1278 aa18.41■□□□□ 0.54
CMTM1-209ENST00000528324 TRIM35Q9UPQ4 493 aa18.41■□□□□ 0.54
CMTM1-209ENST00000528324 BTAF1O14981 1849 aa18.4■□□□□ 0.54
CMTM1-209ENST00000528324 BTBD11A6QL63 1104 aa18.4■□□□□ 0.54
CMTM1-209ENST00000528324 TTC5Q8N0Z6 440 aa18.4■□□□□ 0.54
CMTM1-209ENST00000528324 UPF1Q92900 1129 aaKnown RBP eCLIP18.4■□□□□ 0.54
CMTM1-209ENST00000528324 BABAM1Q9NWV8 329 aa18.4■□□□□ 0.54
CMTM1-209ENST00000528324 PLSCR1O15162 318 aa18.39■□□□□ 0.53
CMTM1-209ENST00000528324 WWC1Q8IX03 1113 aa18.38■□□□□ 0.53
CMTM1-209ENST00000528324 SALL2Q9Y467 1007 aaPredicted RBP18.38■□□□□ 0.53
CMTM1-209ENST00000528324 WDR63Q8IWG1 891 aa18.37■□□□□ 0.53
CMTM1-209ENST00000528324 THUMPD2Q9BTF0 503 aaKnown RBP18.37■□□□□ 0.53
CMTM1-209ENST00000528324 TNS1Q9HBL0 1735 aaKnown RBP18.37■□□□□ 0.53
CMTM1-209ENST00000528324 GNAI1P63096 354 aa18.36■□□□□ 0.53
CMTM1-209ENST00000528324 IL16Q14005 1332 aa18.36■□□□□ 0.53
CMTM1-209ENST00000528324 PTF1AQ7RTS3 328 aa18.36■□□□□ 0.53
CMTM1-209ENST00000528324 PALLDQ8WX93 1383 aa18.36■□□□□ 0.53
CMTM1-209ENST00000528324 ATG3Q9NT62 314 aa18.36■□□□□ 0.53
CMTM1-209ENST00000528324 SIPA1L3O60292 1781 aaPredicted RBP18.35■□□□□ 0.53
CMTM1-209ENST00000528324 HNRNPUQ00839 825 aaKnown RBP eCLIP18.35■□□□□ 0.53
CMTM1-209ENST00000528324 SLC27A3Q5K4L6 730 aa18.35■□□□□ 0.53
CMTM1-209ENST00000528324 ZNF790Q6PG37 636 aa18.35■□□□□ 0.53
CMTM1-209ENST00000528324 CFAP44Q96MT7 982 aa18.35■□□□□ 0.53
CMTM1-209ENST00000528324 IFT57Q9NWB7 429 aa18.35■□□□□ 0.53
CMTM1-209ENST00000528324 TSPYL4Q9UJ04 414 aa18.35■□□□□ 0.53
CMTM1-209ENST00000528324 ASAP1Q9ULH1 1129 aa18.35■□□□□ 0.53
CMTM1-209ENST00000528324 LAS1LQ9Y4W2 734 aaKnown RBP18.35■□□□□ 0.53
CMTM1-209ENST00000528324 RGPD3A6NKT7 1758 aaPredicted RBP18.34■□□□□ 0.53
CMTM1-209ENST00000528324 RGPD4Q7Z3J3 1758 aa18.34■□□□□ 0.53
CMTM1-209ENST00000528324 SENP3-EIF4A1A0A087X0R7 540 aa18.33■□□□□ 0.52
CMTM1-209ENST00000528324 FMNL2Q96PY5 1086 aa18.33■□□□□ 0.52
CMTM1-209ENST00000528324 RBM42Q9BTD8 480 aaKnown RBP18.33■□□□□ 0.52
CMTM1-209ENST00000528324 EN1Q05925 392 aaPredicted RBP18.32■□□□□ 0.52
CMTM1-209ENST00000528324 SLC39A6Q13433 755 aa18.32■□□□□ 0.52
CMTM1-209ENST00000528324 CCNL1Q9UK58 526 aaPredicted RBP18.32■□□□□ 0.52
CMTM1-209ENST00000528324 LOC102724428A0A0B4J2F2 783 aa18.31■□□□□ 0.52
CMTM1-209ENST00000528324 CHL1O00533 1208 aa18.31■□□□□ 0.52
CMTM1-209ENST00000528324 PTCD1O75127 700 aaKnown RBP18.31■□□□□ 0.52
CMTM1-209ENST00000528324 SIK1P57059 783 aa18.31■□□□□ 0.52
CMTM1-209ENST00000528324 VSIG10Q8N0Z9 540 aa18.31■□□□□ 0.52
CMTM1-209ENST00000528324 MYH16Q9H6N6 1097 aa18.31■□□□□ 0.52
CMTM1-209ENST00000528324 GOLGA2Q08379 1002 aa18.3■□□□□ 0.52
CMTM1-209ENST00000528324 TXNRD1Q16881 649 aa18.3■□□□□ 0.52
CMTM1-209ENST00000528324 DEFB132Q7Z7B7 95 aa18.3■□□□□ 0.52
CMTM1-209ENST00000528324 CAMKK2Q96RR4 588 aa18.3■□□□□ 0.52
CMTM1-209ENST00000528324 TEX13AQ9BXU3 409 aaPredicted RBP18.3■□□□□ 0.52
CMTM1-209ENST00000528324 MIS18AQ9NYP9 233 aa18.3■□□□□ 0.52
CMTM1-209ENST00000528324 ATP6V1AP38606 617 aa18.29■□□□□ 0.52
CMTM1-209ENST00000528324 PAPPAQ13219 1627 aa18.29■□□□□ 0.52
CMTM1-209ENST00000528324 LY75O60449 1722 aa18.29■□□□□ 0.52
CMTM1-209ENST00000528324 ZNF853P0CG23 659 aa18.28■□□□□ 0.52
CMTM1-209ENST00000528324 EZH2Q15910 746 aaKnown RBP18.28■□□□□ 0.52
CMTM1-209ENST00000528324 CHMP4AQ9BY43 222 aa18.28■□□□□ 0.52
CMTM1-209ENST00000528324 ZNF521Q96K83 1311 aa18.27■□□□□ 0.52
CMTM1-209ENST00000528324 E9PSI1 815 aa18.27■□□□□ 0.52
CMTM1-209ENST00000528324 SNRPA1P09661 255 aaKnown RBP18.27■□□□□ 0.52
CMTM1-209ENST00000528324 ZNF496Q96IT1 587 aaPredicted RBP18.27■□□□□ 0.52
CMTM1-209ENST00000528324 KDM3BQ7LBC6 1761 aa18.27■□□□□ 0.51
CMTM1-209ENST00000528324 ZBED9Q6R2W3 1325 aa18.26■□□□□ 0.51
CMTM1-209ENST00000528324 ZNF831Q5JPB2 1677 aa18.26■□□□□ 0.51
CMTM1-209ENST00000528324 STARD3NLO95772 234 aa18.26■□□□□ 0.51
CMTM1-209ENST00000528324 EIF4A1P60842 406 aaKnown RBP18.26■□□□□ 0.51
CMTM1-209ENST00000528324 NBPF14Q5TI25 921 aa18.26■□□□□ 0.51
CMTM1-209ENST00000528324 MBIPQ9NS73 344 aa18.26■□□□□ 0.51
CMTM1-209ENST00000528324 UBR2Q8IWV8 1755 aa18.26■□□□□ 0.51
CMTM1-209ENST00000528324 HEG1Q9ULI3 1381 aa18.26■□□□□ 0.51
CMTM1-209ENST00000528324 KCPQ6ZWJ8 1503 aa18.24■□□□□ 0.51
CMTM1-209ENST00000528324 KCNQ3O43525 872 aa18.24■□□□□ 0.51
CMTM1-209ENST00000528324 PROM2Q8N271 834 aa18.24■□□□□ 0.51
CMTM1-209ENST00000528324 SOS1Q07889 1333 aaPredicted RBP18.23■□□□□ 0.51
CMTM1-209ENST00000528324 HOXB7P09629 217 aa18.22■□□□□ 0.51
CMTM1-209ENST00000528324 LRRC4BQ9NT99 713 aa18.22■□□□□ 0.51
CMTM1-209ENST00000528324 GIGYF1O75420 1035 aaPredicted RBP18.21■□□□□ 0.51
CMTM1-209ENST00000528324 TSR2Q969E8 191 aaKnown RBP18.21■□□□□ 0.51
CMTM1-209ENST00000528324 AK7Q96M32 723 aa18.21■□□□□ 0.51
CMTM1-209ENST00000528324 STK32BQ9NY57 414 aa18.21■□□□□ 0.51
CMTM1-209ENST00000528324 RREB1Q92766 1687 aa18.21■□□□□ 0.51
CMTM1-209ENST00000528324 FANCIQ9NVI1 1328 aa18.21■□□□□ 0.51
CMTM1-209ENST00000528324 SLFN5Q08AF3 891 aa18.2■□□□□ 0.5
CMTM1-209ENST00000528324 ITPK1Q13572 414 aa18.2■□□□□ 0.5
CMTM1-209ENST00000528324 RC3H1Q5TC82 1133 aaKnown RBP18.2■□□□□ 0.5
CMTM1-209ENST00000528324 NPM2Q86SE8 214 aaKnown RBP18.2■□□□□ 0.5
CMTM1-209ENST00000528324 DNAJC10Q8IXB1 793 aa18.2■□□□□ 0.5
CMTM1-209ENST00000528324 SLC4A9Q96Q91 983 aa18.2■□□□□ 0.5
CMTM1-209ENST00000528324 CICQ96RK0 1608 aaPredicted RBP18.2■□□□□ 0.5
CMTM1-209ENST00000528324 C5P01031 1676 aa18.19■□□□□ 0.5
CMTM1-209ENST00000528324 TAF1LQ8IZX4 1826 aa18.19■□□□□ 0.5
CMTM1-209ENST00000528324 KCNQ4P56696 695 aa18.19■□□□□ 0.5
CMTM1-209ENST00000528324 CNTNAP4Q9C0A0 1308 aa18.19■□□□□ 0.5
CMTM1-209ENST00000528324 CYP19A1P11511 503 aaPredicted RBP18.18■□□□□ 0.5
CMTM1-209ENST00000528324 DUSP27Q5VZP5 1158 aa18.18■□□□□ 0.5
CMTM1-209ENST00000528324 LINC00116Q8NCU8 138 aa18.18■□□□□ 0.5
CMTM1-209ENST00000528324 YTHDC1Q96MU7 727 aaKnown RBP18.18■□□□□ 0.5
CMTM1-209ENST00000528324 CRKLP46109 303 aaKnown RBP18.17■□□□□ 0.5
CMTM1-209ENST00000528324 FLAD1Q8NFF5 587 aa18.17■□□□□ 0.5
CMTM1-209ENST00000528324 CCDC87Q9NVE4 849 aa18.17■□□□□ 0.5
CMTM1-209ENST00000528324 TFCP2L1Q9NZI6 479 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms