RNA–Protein interactions for RNA: ENST00000528316.5

AP003555.1-201, humanhuman

TSL 3

Gene AP003555.1, Length 548 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-201ENST00000528316 CAMKK2Q96RR4 588 aa11.8□□□□□ -0.52
AP003555.1-201ENST00000528316 WDR17Q8IZU2 1322 aa11.8□□□□□ -0.52
AP003555.1-201ENST00000528316 USP31Q70CQ4 1352 aa11.79□□□□□ -0.52
AP003555.1-201ENST00000528316 CSB-PGBD3P0DP91 1061 aa11.79□□□□□ -0.52
AP003555.1-201ENST00000528316 PTCD2Q8WV60 388 aaKnown RBP11.79□□□□□ -0.52
AP003555.1-201ENST00000528316 PCGF6Q9BYE7 350 aa11.79□□□□□ -0.52
AP003555.1-201ENST00000528316 TERF2IPQ9NYB0 399 aa11.79□□□□□ -0.52
AP003555.1-201ENST00000528316 DDB1Q16531 1140 aa11.78□□□□□ -0.52
AP003555.1-201ENST00000528316 A0A1W2PP64 1363 aa11.78□□□□□ -0.52
AP003555.1-201ENST00000528316 COL18A1P39060 1754 aa11.77□□□□□ -0.52
AP003555.1-201ENST00000528316 AKAP12Q02952 1782 aa11.77□□□□□ -0.52
AP003555.1-201ENST00000528316 R3HDM1Q15032 1099 aaKnown RBP11.77□□□□□ -0.53
AP003555.1-201ENST00000528316 CARD10Q9BWT7 1032 aa11.77□□□□□ -0.53
AP003555.1-201ENST00000528316 RGS20O76081 388 aa11.76□□□□□ -0.53
AP003555.1-201ENST00000528316 ECM2O94769 699 aaPredicted RBP11.76□□□□□ -0.53
AP003555.1-201ENST00000528316 FBLN1P23142 703 aa11.76□□□□□ -0.53
AP003555.1-201ENST00000528316 PTF1AQ7RTS3 328 aa11.76□□□□□ -0.53
AP003555.1-201ENST00000528316 MARCH10Q8NA82 808 aaPredicted RBP11.76□□□□□ -0.53
AP003555.1-201ENST00000528316 TAOK2Q9UL54 1235 aa11.76□□□□□ -0.53
AP003555.1-201ENST00000528316 DISP2A7MBM2 1401 aa11.76□□□□□ -0.53
AP003555.1-201ENST00000528316 NFAT5O94916 1531 aa11.76□□□□□ -0.53
AP003555.1-201ENST00000528316 STK25O00506 426 aa11.75□□□□□ -0.53
AP003555.1-201ENST00000528316 IFFO2Q5TF58 517 aa11.75□□□□□ -0.53
AP003555.1-201ENST00000528316 EDC4Q6P2E9 1401 aaKnown RBP11.75□□□□□ -0.53
AP003555.1-201ENST00000528316 CDCA7Q9BWT1 371 aaPredicted RBP11.74□□□□□ -0.53
AP003555.1-201ENST00000528316 EXOC5O00471 708 aa11.73□□□□□ -0.53
AP003555.1-201ENST00000528316 PPP1R37O75864 691 aa11.73□□□□□ -0.53
AP003555.1-201ENST00000528316 RGPD1P0DJD0 1748 aa11.73□□□□□ -0.53
AP003555.1-201ENST00000528316 TMF1P82094 1093 aa11.73□□□□□ -0.53
AP003555.1-201ENST00000528316 PPP4R3BQ5MIZ7 849 aa11.73□□□□□ -0.53
AP003555.1-201ENST00000528316 MON2Q7Z3U7 1717 aa11.73□□□□□ -0.53
AP003555.1-201ENST00000528316 ANKRD24Q8TF21 1146 aa11.73□□□□□ -0.53
AP003555.1-201ENST00000528316 USP47Q96K76 1375 aa11.73□□□□□ -0.53
AP003555.1-201ENST00000528316 NLRP2Q9NX02 1062 aa11.73□□□□□ -0.53
AP003555.1-201ENST00000528316 TNS1Q9HBL0 1735 aaKnown RBP11.72□□□□□ -0.53
AP003555.1-201ENST00000528316 COG3Q96JB2 828 aa11.72□□□□□ -0.53
AP003555.1-201ENST00000528316 IRX2Q9BZI1 471 aaPredicted RBP11.72□□□□□ -0.53
AP003555.1-201ENST00000528316 PARP4Q9UKK3 1724 aaKnown RBP11.72□□□□□ -0.53
AP003555.1-201ENST00000528316 OVOS2A0A0G2JMS6 1433 aa11.71□□□□□ -0.53
AP003555.1-201ENST00000528316 OVOS2A0A0J9YW53 1432 aa11.71□□□□□ -0.53
AP003555.1-201ENST00000528316 OVOS2Q6IE36 1432 aa11.71□□□□□ -0.53
AP003555.1-201ENST00000528316 C11orf95C9JLR9 678 aaPredicted RBP11.71□□□□□ -0.53
AP003555.1-201ENST00000528316 PTPN5P54829 565 aa11.71□□□□□ -0.53
AP003555.1-201ENST00000528316 IP6K1Q92551 441 aa11.71□□□□□ -0.53
AP003555.1-201ENST00000528316 LTV1Q96GA3 475 aaPredicted RBP11.71□□□□□ -0.53
AP003555.1-201ENST00000528316 TIMELESSQ9UNS1 1208 aa11.71□□□□□ -0.53
AP003555.1-201ENST00000528316 CCDC7Q96M83 1385 aa11.7□□□□□ -0.54
AP003555.1-201ENST00000528316 NINLQ9Y2I6 1382 aa11.7□□□□□ -0.54
AP003555.1-201ENST00000528316 RGPD5Q99666 1765 aa11.7□□□□□ -0.54
AP003555.1-201ENST00000528316 FYB1O15117 783 aa11.7□□□□□ -0.54
AP003555.1-201ENST00000528316 GGNBP2Q9H3C7 697 aa11.7□□□□□ -0.54
AP003555.1-201ENST00000528316 VPS9D1Q9Y2B5 631 aa11.7□□□□□ -0.54
AP003555.1-201ENST00000528316 ANKRD36BQ8N2N9 1353 aa11.69□□□□□ -0.54
AP003555.1-201ENST00000528316 PARD3Q8TEW0 1356 aa11.69□□□□□ -0.54
AP003555.1-201ENST00000528316 MAP3K19Q56UN5 1328 aa11.69□□□□□ -0.54
AP003555.1-201ENST00000528316 PLSCR1O15162 318 aa11.69□□□□□ -0.54
AP003555.1-201ENST00000528316 KCNQ2O43526 872 aa11.69□□□□□ -0.54
AP003555.1-201ENST00000528316 IL2RBP14784 551 aa11.69□□□□□ -0.54
AP003555.1-201ENST00000528316 NBPF14Q5TI25 921 aa11.69□□□□□ -0.54
AP003555.1-201ENST00000528316 KCNK17Q96T54 332 aa11.69□□□□□ -0.54
AP003555.1-201ENST00000528316 LRRC37A3O60309 1634 aa11.68□□□□□ -0.54
AP003555.1-201ENST00000528316 HOXC9P31274 260 aa11.68□□□□□ -0.54
AP003555.1-201ENST00000528316 AMPHP49418 695 aa11.68□□□□□ -0.54
AP003555.1-201ENST00000528316 RRS1Q15050 365 aaKnown RBP11.68□□□□□ -0.54
AP003555.1-201ENST00000528316 ACSBG1Q96GR2 724 aa11.68□□□□□ -0.54
AP003555.1-201ENST00000528316 CARD14Q9BXL6 1004 aa11.68□□□□□ -0.54
AP003555.1-201ENST00000528316 PEAK1Q9H792 1746 aa11.68□□□□□ -0.54
AP003555.1-201ENST00000528316 CLSPNQ9HAW4 1339 aa11.67□□□□□ -0.54
AP003555.1-201ENST00000528316 CDCA8Q53HL2 280 aa11.67□□□□□ -0.54
AP003555.1-201ENST00000528316 BCL9O00512 1426 aa11.67□□□□□ -0.54
AP003555.1-201ENST00000528316 ABCC6O95255 1503 aa11.66□□□□□ -0.54
AP003555.1-201ENST00000528316 USP54Q70EL1 1684 aa11.66□□□□□ -0.54
AP003555.1-201ENST00000528316 FOXK1P85037 733 aa11.66□□□□□ -0.54
AP003555.1-201ENST00000528316 RGL2O15211 777 aa11.65□□□□□ -0.54
AP003555.1-201ENST00000528316 PLPP6Q8IY26 295 aa11.65□□□□□ -0.54
AP003555.1-201ENST00000528316 CCER1Q8TC90 406 aaPredicted RBP11.65□□□□□ -0.54
AP003555.1-201ENST00000528316 DDX54Q8TDD1 881 aaKnown RBP11.65□□□□□ -0.54
AP003555.1-201ENST00000528316 ANO8Q9HCE9 1232 aaPredicted RBP11.65□□□□□ -0.54
AP003555.1-201ENST00000528316 TNS2Q63HR2 1409 aa11.64□□□□□ -0.55
AP003555.1-201ENST00000528316 TXNRD1Q16881 649 aa11.64□□□□□ -0.55
AP003555.1-201ENST00000528316 NBPF6Q5VWK0 638 aa11.64□□□□□ -0.55
AP003555.1-201ENST00000528316 NBPF4Q96M43 638 aa11.64□□□□□ -0.55
AP003555.1-201ENST00000528316 LTN1O94822 1766 aa11.64□□□□□ -0.55
AP003555.1-201ENST00000528316 HSP90AB2PQ58FF8 381 aa11.63□□□□□ -0.55
AP003555.1-201ENST00000528316 THSD4Q6ZMP0 1018 aa11.63□□□□□ -0.55
AP003555.1-201ENST00000528316 USHBP1Q8N6Y0 703 aa11.63□□□□□ -0.55
AP003555.1-201ENST00000528316 POLR3GLQ9BT43 218 aa11.63□□□□□ -0.55
AP003555.1-201ENST00000528316 PDGFDQ9GZP0 370 aaPredicted RBP11.63□□□□□ -0.55
AP003555.1-201ENST00000528316 RREB1Q92766 1687 aa11.62□□□□□ -0.55
AP003555.1-201ENST00000528316 SBF2Q86WG5 1849 aa11.62□□□□□ -0.55
AP003555.1-201ENST00000528316 WNK3Q9BYP7 1800 aa11.62□□□□□ -0.55
AP003555.1-201ENST00000528316 LRP5O75197 1615 aa11.61□□□□□ -0.55
AP003555.1-201ENST00000528316 NUP188Q5SRE5 1749 aa11.61□□□□□ -0.55
AP003555.1-201ENST00000528316 BHMG1C9JSJ3 638 aaPredicted RBP11.61□□□□□ -0.55
AP003555.1-201ENST00000528316 HSPA5P11021 654 aaKnown RBP11.61□□□□□ -0.55
AP003555.1-201ENST00000528316 SLC4A5Q9BY07 1137 aa11.61□□□□□ -0.55
AP003555.1-201ENST00000528316 NSD3Q9BZ95 1437 aa11.6□□□□□ -0.55
AP003555.1-201ENST00000528316 EIF4G2P78344 907 aaKnown RBP eCLIP11.6□□□□□ -0.55
AP003555.1-201ENST00000528316 ZCRB1Q8TBF4 217 aaKnown RBP11.6□□□□□ -0.55
AP003555.1-201ENST00000528316 EMILIN1Q9Y6C2 1016 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms