RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 TPM2P07951 284 aa12□□□□□ -0.49
SF3B2-206ENST00000528302 ZNF853P0CG23 659 aa12□□□□□ -0.49
SF3B2-206ENST00000528302 PDZRN4Q6ZMN7 1036 aaPredicted RBP12□□□□□ -0.49
SF3B2-206ENST00000528302 MYO3AQ8NEV4 1616 aa12□□□□□ -0.49
SF3B2-206ENST00000528302 RTF1Q92541 710 aaKnown RBP12□□□□□ -0.49
SF3B2-206ENST00000528302 EIF2AK3Q9NZJ5 1116 aaKnown RBP12□□□□□ -0.49
SF3B2-206ENST00000528302 USP25Q9UHP3 1055 aa12□□□□□ -0.49
SF3B2-206ENST00000528302 FAM135BQ49AJ0 1406 aa12□□□□□ -0.49
SF3B2-206ENST00000528302 PREX1Q8TCU6 1659 aa12□□□□□ -0.49
SF3B2-206ENST00000528302 ADGRB2O60241 1585 aa11.99□□□□□ -0.49
SF3B2-206ENST00000528302 FIBPO43427 364 aa11.99□□□□□ -0.49
SF3B2-206ENST00000528302 LMOD3Q0VAK6 560 aa11.99□□□□□ -0.49
SF3B2-206ENST00000528302 IL25Q9H293 177 aa11.99□□□□□ -0.49
SF3B2-206ENST00000528302 ALKQ9UM73 1620 aa11.99□□□□□ -0.49
SF3B2-206ENST00000528302 HMGB1P09429 215 aaKnown RBP11.99□□□□□ -0.49
SF3B2-206ENST00000528302 EIF2S2P20042 333 aaKnown RBP11.99□□□□□ -0.49
SF3B2-206ENST00000528302 ZNF445P59923 1031 aa11.99□□□□□ -0.49
SF3B2-206ENST00000528302 TTC12Q9H892 705 aaPredicted RBP11.99□□□□□ -0.49
SF3B2-206ENST00000528302 CD163L1Q9NR16 1453 aa11.99□□□□□ -0.49
SF3B2-206ENST00000528302 CLTCQ00610 1675 aaKnown RBP11.99□□□□□ -0.49
SF3B2-206ENST00000528302 LTKP29376 864 aa11.98□□□□□ -0.49
SF3B2-206ENST00000528302 TMEM131LA2VDJ0 1609 aa11.98□□□□□ -0.49
SF3B2-206ENST00000528302 LRSAM1Q6UWE0 723 aa11.98□□□□□ -0.49
SF3B2-206ENST00000528302 RPAP2Q8IXW5 612 aaPredicted RBP11.98□□□□□ -0.49
SF3B2-206ENST00000528302 RTL1A6NKG5 1358 aa11.98□□□□□ -0.49
SF3B2-206ENST00000528302 HMMRO75330 724 aa11.98□□□□□ -0.49
SF3B2-206ENST00000528302 ANXA1P04083 346 aa11.98□□□□□ -0.49
SF3B2-206ENST00000528302 LRRFIP2Q9Y608 721 aaKnown RBP11.98□□□□□ -0.49
SF3B2-206ENST00000528302 PRR36Q9H6K5 1346 aa11.97□□□□□ -0.49
SF3B2-206ENST00000528302 CYP2E1P05181 493 aaPredicted RBP11.97□□□□□ -0.49
SF3B2-206ENST00000528302 SPC24Q8NBT2 197 aa11.97□□□□□ -0.49
SF3B2-206ENST00000528302 CCDC61Q9Y6R9 512 aa11.97□□□□□ -0.49
SF3B2-206ENST00000528302 PNPLA6Q8IY17 1366 aa11.97□□□□□ -0.49
SF3B2-206ENST00000528302 HCLS1P14317 486 aaPredicted RBP11.96□□□□□ -0.49
SF3B2-206ENST00000528302 USP48Q86UV5 1035 aa11.96□□□□□ -0.49
SF3B2-206ENST00000528302 PDCL3Q9H2J4 239 aa11.96□□□□□ -0.49
SF3B2-206ENST00000528302 CWC22Q9HCG8 908 aaKnown RBP11.96□□□□□ -0.49
SF3B2-206ENST00000528302 NOL7Q9UMY1 257 aaKnown RBP11.96□□□□□ -0.49
SF3B2-206ENST00000528302 SPG7Q9UQ90 795 aa11.96□□□□□ -0.49
SF3B2-206ENST00000528302 CNPY2Q9Y2B0 182 aa11.96□□□□□ -0.49
SF3B2-206ENST00000528302 ZKSCAN5Q9Y2L8 839 aa11.96□□□□□ -0.49
SF3B2-206ENST00000528302 PTCH1Q13635 1447 aa11.96□□□□□ -0.49
SF3B2-206ENST00000528302 MX1P20591 662 aa11.96□□□□□ -0.49
SF3B2-206ENST00000528302 PUS7Q96PZ0 661 aaKnown RBP11.96□□□□□ -0.49
SF3B2-206ENST00000528302 STK31Q9BXU1 1019 aa11.96□□□□□ -0.49
SF3B2-206ENST00000528302 TSPY26PQ9H489 355 aa11.96□□□□□ -0.49
SF3B2-206ENST00000528302 BCCIPQ9P287 314 aaKnown RBP eCLIP11.96□□□□□ -0.49
SF3B2-206ENST00000528302 MAP2P11137 1827 aaKnown RBP11.96□□□□□ -0.5
SF3B2-206ENST00000528302 USHBP1Q8N6Y0 703 aa11.96□□□□□ -0.5
SF3B2-206ENST00000528302 ESYT1Q9BSJ8 1104 aa11.96□□□□□ -0.5
SF3B2-206ENST00000528302 A2ML1A8K2U0 1454 aa11.95□□□□□ -0.5
SF3B2-206ENST00000528302 SETD1BQ9UPS6 1966 aaKnown RBP11.95□□□□□ -0.5
SF3B2-206ENST00000528302 MTHFSDQ2M296 383 aaKnown RBP11.95□□□□□ -0.5
SF3B2-206ENST00000528302 LRRCC1Q9C099 1032 aa11.95□□□□□ -0.5
SF3B2-206ENST00000528302 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.95□□□□□ -0.5
SF3B2-206ENST00000528302 MED14O60244 1454 aa11.95□□□□□ -0.5
SF3B2-206ENST00000528302 RIMBP3CA6NJZ7 1639 aa11.95□□□□□ -0.5
SF3B2-206ENST00000528302 RIMBP3BA6NNM3 1639 aa11.95□□□□□ -0.5
SF3B2-206ENST00000528302 RIMBP3Q9UFD9 1639 aa11.95□□□□□ -0.5
SF3B2-206ENST00000528302 SURF6O75683 361 aaKnown RBP11.95□□□□□ -0.5
SF3B2-206ENST00000528302 GNAI2P04899 355 aa11.95□□□□□ -0.5
SF3B2-206ENST00000528302 MCCP23508 829 aa11.95□□□□□ -0.5
SF3B2-206ENST00000528302 CWC27Q6UX04 472 aaKnown RBP11.95□□□□□ -0.5
SF3B2-206ENST00000528302 ARHGAP31Q2M1Z3 1444 aa11.95□□□□□ -0.5
SF3B2-206ENST00000528302 ACEP12821 1306 aa11.95□□□□□ -0.5
SF3B2-206ENST00000528302 BRPF1P55201 1214 aaPredicted RBP11.94□□□□□ -0.5
SF3B2-206ENST00000528302 NGDNQ8NEJ9 315 aaKnown RBP11.94□□□□□ -0.5
SF3B2-206ENST00000528302 NEURL4Q96JN8 1562 aa11.94□□□□□ -0.5
SF3B2-206ENST00000528302 OS9Q13438 667 aaPredicted RBP11.94□□□□□ -0.5
SF3B2-206ENST00000528302 GIMAP6Q6P9H5 292 aa11.94□□□□□ -0.5
SF3B2-206ENST00000528302 CHL1O00533 1208 aa11.94□□□□□ -0.5
SF3B2-206ENST00000528302 FERMT3Q86UX7 667 aa11.94□□□□□ -0.5
SF3B2-206ENST00000528302 TCEANC2Q96MN5 208 aa11.94□□□□□ -0.5
SF3B2-206ENST00000528302 AMPHP49418 695 aa11.93□□□□□ -0.5
SF3B2-206ENST00000528302 ZHX1Q9UKY1 873 aaPredicted RBP11.93□□□□□ -0.5
SF3B2-206ENST00000528302 CCDC9Q9Y3X0 531 aaKnown RBP11.93□□□□□ -0.5
SF3B2-206ENST00000528302 ATP10DQ9P241 1426 aa11.93□□□□□ -0.5
SF3B2-206ENST00000528302 ARHGEF40Q8TER5 1519 aa11.93□□□□□ -0.5
SF3B2-206ENST00000528302 VPS37CA5D8V6 355 aaPredicted RBP11.93□□□□□ -0.5
SF3B2-206ENST00000528302 CHMLP26374 656 aa11.93□□□□□ -0.5
SF3B2-206ENST00000528302 FAM173BQ6P4H8 233 aa11.93□□□□□ -0.5
SF3B2-206ENST00000528302 PHAXQ9H814 394 aaKnown RBP11.92□□□□□ -0.5
SF3B2-206ENST00000528302 CCDC39Q9UFE4 941 aa11.92□□□□□ -0.5
SF3B2-206ENST00000528302 ROBO2Q9HCK4 1378 aa11.92□□□□□ -0.5
SF3B2-206ENST00000528302 FLIIQ13045 1269 aa11.92□□□□□ -0.5
SF3B2-206ENST00000528302 LMOD2Q6P5Q4 547 aa11.92□□□□□ -0.5
SF3B2-206ENST00000528302 CAMK4Q16566 473 aa11.91□□□□□ -0.5
SF3B2-206ENST00000528302 CCDC83Q8IWF9 413 aa11.91□□□□□ -0.5
SF3B2-206ENST00000528302 PIK3R4Q99570 1358 aa11.91□□□□□ -0.5
SF3B2-206ENST00000528302 SRCIN1Q9C0H9 1055 aa11.91□□□□□ -0.5
SF3B2-206ENST00000528302 MAP3K19Q56UN5 1328 aa11.91□□□□□ -0.5
SF3B2-206ENST00000528302 PPFIA3O75145 1194 aa11.91□□□□□ -0.5
SF3B2-206ENST00000528302 BRD1O95696 1058 aa11.91□□□□□ -0.5
SF3B2-206ENST00000528302 CLEC17AQ6ZS10 378 aa11.91□□□□□ -0.5
SF3B2-206ENST00000528302 AMOTL2Q9Y2J4 779 aa11.91□□□□□ -0.5
SF3B2-206ENST00000528302 CPS1P31327 1500 aa11.91□□□□□ -0.5
SF3B2-206ENST00000528302 ADCY5O95622 1261 aa11.91□□□□□ -0.5
SF3B2-206ENST00000528302 FOSBP53539 338 aa11.91□□□□□ -0.5
SF3B2-206ENST00000528302 NECAB1Q8N987 351 aa11.91□□□□□ -0.5
SF3B2-206ENST00000528302 ZFYVE9O95405 1425 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms