RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 YY1P25490 414 aa31.2■■■□□ 2.59
PKP3-206ENST00000528036 TUBGCP6Q96RT7 1819 aa31.19■■■□□ 2.58
PKP3-206ENST00000528036 KDM6AO15550 1401 aaPredicted RBP31.19■■■□□ 2.58
PKP3-206ENST00000528036 LINC00116Q8NCU8 138 aa31.19■■■□□ 2.58
PKP3-206ENST00000528036 TAF1LQ8IZX4 1826 aa31.19■■■□□ 2.58
PKP3-206ENST00000528036 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.18■■■□□ 2.58
PKP3-206ENST00000528036 RC3H1Q5TC82 1133 aaKnown RBP31.17■■■□□ 2.58
PKP3-206ENST00000528036 CFAP53Q96M91 514 aa31.17■■■□□ 2.58
PKP3-206ENST00000528036 ITPK1Q13572 414 aa31.16■■■□□ 2.58
PKP3-206ENST00000528036 RBM42Q9BTD8 480 aaKnown RBP31.16■■■□□ 2.58
PKP3-206ENST00000528036 HMOX1P09601 288 aa31.15■■■□□ 2.58
PKP3-206ENST00000528036 NFATC2IPQ8NCF5 419 aa31.15■■■□□ 2.58
PKP3-206ENST00000528036 GNPATO15228 680 aa31.14■■■□□ 2.58
PKP3-206ENST00000528036 KLHL34Q8N239 644 aa31.14■■■□□ 2.58
PKP3-206ENST00000528036 ADRA2BP18089 450 aa31.13■■■□□ 2.57
PKP3-206ENST00000528036 RTCBQ9Y3I0 505 aaKnown RBP31.13■■■□□ 2.57
PKP3-206ENST00000528036 PHF14O94880 888 aa31.12■■■□□ 2.57
PKP3-206ENST00000528036 ZNF831Q5JPB2 1677 aa31.12■■■□□ 2.57
PKP3-206ENST00000528036 MSL1Q68DK7 614 aa31.11■■■□□ 2.57
PKP3-206ENST00000528036 CNTNAP4Q9C0A0 1308 aa31.11■■■□□ 2.57
PKP3-206ENST00000528036 CD2APQ9Y5K6 639 aa31.11■■■□□ 2.57
PKP3-206ENST00000528036 GPR162Q16538 588 aa31.1■■■□□ 2.57
PKP3-206ENST00000528036 TRAPPC3LQ5T215 181 aa31.09■■■□□ 2.57
PKP3-206ENST00000528036 SLC52A2Q9HAB3 445 aa31.09■■■□□ 2.57
PKP3-206ENST00000528036 NUDCQ9Y266 331 aa31.09■■■□□ 2.57
PKP3-206ENST00000528036 U2SURPO15042 1029 aaKnown RBP31.08■■■□□ 2.57
PKP3-206ENST00000528036 CNGB1Q14028 1251 aaPredicted RBP31.08■■■□□ 2.57
PKP3-206ENST00000528036 RNMTO43148 476 aaKnown RBP31.07■■■□□ 2.56
PKP3-206ENST00000528036 MTHFSDQ2M296 383 aaKnown RBP31.07■■■□□ 2.56
PKP3-206ENST00000528036 GAS2L2Q8NHY3 880 aa31.07■■■□□ 2.56
PKP3-206ENST00000528036 SLC4A9Q96Q91 983 aa31.07■■■□□ 2.56
PKP3-206ENST00000528036 UBR3Q6ZT12 1888 aa31.06■■■□□ 2.56
PKP3-206ENST00000528036 COL3A1P02461 1466 aaPredicted RBP31.06■■■□□ 2.56
PKP3-206ENST00000528036 PTCD1O75127 700 aaKnown RBP31.05■■■□□ 2.56
PKP3-206ENST00000528036 RPS6KA4O75676 772 aa31.05■■■□□ 2.56
PKP3-206ENST00000528036 AMIGO3Q86WK7 504 aa31.05■■■□□ 2.56
PKP3-206ENST00000528036 NLGN1Q8N2Q7 840 aa31.03■■■□□ 2.56
PKP3-206ENST00000528036 GRIN3BO60391 1043 aa31.02■■■□□ 2.56
PKP3-206ENST00000528036 LGR6Q9HBX8 967 aa31.02■■■□□ 2.56
PKP3-206ENST00000528036 PPP2R1AP30153 589 aa31■■■□□ 2.55
PKP3-206ENST00000528036 RFC4P35249 363 aa31■■■□□ 2.55
PKP3-206ENST00000528036 NLGN2Q8NFZ4 835 aa31■■■□□ 2.55
PKP3-206ENST00000528036 SCN11AQ9UI33 1791 aa31■■■□□ 2.55
PKP3-206ENST00000528036 MRC1P22897 1456 aa30.99■■■□□ 2.55
PKP3-206ENST00000528036 GNAT3A8MTJ3 354 aa30.98■■■□□ 2.55
PKP3-206ENST00000528036 CRKLP46109 303 aaKnown RBP30.97■■■□□ 2.55
PKP3-206ENST00000528036 VSIG10Q8N0Z9 540 aa30.97■■■□□ 2.55
PKP3-206ENST00000528036 ARHGEF1Q92888 912 aaKnown RBP30.97■■■□□ 2.55
PKP3-206ENST00000528036 SMIM5Q71RC9 77 aa30.96■■■□□ 2.55
PKP3-206ENST00000528036 PELP1Q8IZL8 1130 aaKnown RBP30.96■■■□□ 2.55
PKP3-206ENST00000528036 TEFQ10587 303 aa30.94■■■□□ 2.54
PKP3-206ENST00000528036 FCHSD2O94868 740 aa30.93■■■□□ 2.54
PKP3-206ENST00000528036 TTC5Q8N0Z6 440 aa30.93■■■□□ 2.54
PKP3-206ENST00000528036 CICQ96RK0 1608 aaPredicted RBP30.92■■■□□ 2.54
PKP3-206ENST00000528036 MMP10P09238 476 aa30.92■■■□□ 2.54
PKP3-206ENST00000528036 RSPH6AQ9H0K4 717 aa30.92■■■□□ 2.54
PKP3-206ENST00000528036 COL5A3P25940 1745 aaPredicted RBP30.92■■■□□ 2.54
PKP3-206ENST00000528036 ADAMTS7Q9UKP4 1686 aa30.91■■■□□ 2.54
PKP3-206ENST00000528036 U2AF1L5P0DN76 240 aaPredicted RBP30.91■■■□□ 2.54
PKP3-206ENST00000528036 PRKAR2BP31323 418 aa30.91■■■□□ 2.54
PKP3-206ENST00000528036 U2AF1Q01081 240 aaKnown RBP eCLIP30.91■■■□□ 2.54
PKP3-206ENST00000528036 CCDC87Q9NVE4 849 aa30.9■■■□□ 2.54
PKP3-206ENST00000528036 GYS1P13807 737 aa30.89■■■□□ 2.54
PKP3-206ENST00000528036 SLC39A6Q13433 755 aa30.89■■■□□ 2.54
PKP3-206ENST00000528036 DNAJC10Q8IXB1 793 aa30.89■■■□□ 2.54
PKP3-206ENST00000528036 INTS5Q6P9B9 1019 aaKnown RBP30.88■■■□□ 2.53
PKP3-206ENST00000528036 TEX13AQ9BXU3 409 aaPredicted RBP30.88■■■□□ 2.53
PKP3-206ENST00000528036 IL17REQ8NFR9 667 aa30.87■■■□□ 2.53
PKP3-206ENST00000528036 PARP3Q9Y6F1 533 aa30.87■■■□□ 2.53
PKP3-206ENST00000528036 STARD3NLO95772 234 aa30.86■■■□□ 2.53
PKP3-206ENST00000528036 CYP19A1P11511 503 aaPredicted RBP30.86■■■□□ 2.53
PKP3-206ENST00000528036 TGFB2P61812 414 aa30.86■■■□□ 2.53
PKP3-206ENST00000528036 CHD4Q14839 1912 aa30.85■■■□□ 2.53
PKP3-206ENST00000528036 NEFMP07197 916 aa30.85■■■□□ 2.53
PKP3-206ENST00000528036 CEMIPQ8WUJ3 1361 aa30.84■■■□□ 2.53
PKP3-206ENST00000528036 USP42Q9H9J4 1324 aaKnown RBP30.84■■■□□ 2.53
PKP3-206ENST00000528036 ZPR1O75312 459 aa30.84■■■□□ 2.53
PKP3-206ENST00000528036 YBX3P16989 372 aaKnown RBP eCLIP30.84■■■□□ 2.53
PKP3-206ENST00000528036 ZNF784Q8NCA9 323 aaPredicted RBP30.84■■■□□ 2.53
PKP3-206ENST00000528036 RTF1Q92541 710 aaKnown RBP30.84■■■□□ 2.53
PKP3-206ENST00000528036 PHACTR3Q96KR7 559 aa30.84■■■□□ 2.53
PKP3-206ENST00000528036 HTATSF1O43719 755 aaKnown RBP30.83■■■□□ 2.53
PKP3-206ENST00000528036 ZNF790Q6PG37 636 aa30.83■■■□□ 2.53
PKP3-206ENST00000528036 SOS1Q07889 1333 aaPredicted RBP30.82■■■□□ 2.52
PKP3-206ENST00000528036 PNNQ9H307 717 aaKnown RBP30.82■■■□□ 2.52
PKP3-206ENST00000528036 KCPQ6ZWJ8 1503 aa30.82■■■□□ 2.52
PKP3-206ENST00000528036 TJP1Q07157 1748 aa30.81■■■□□ 2.52
PKP3-206ENST00000528036 MYH14Q7Z406 1995 aaKnown RBP30.81■■■□□ 2.52
PKP3-206ENST00000528036 UTRNP46939 3433 aa30.79■■■□□ 2.52
PKP3-206ENST00000528036 FMNL2Q96PY5 1086 aa30.79■■■□□ 2.52
PKP3-206ENST00000528036 RALBP1Q15311 655 aa30.78■■■□□ 2.52
PKP3-206ENST00000528036 A0A087WZG4 1122 aa30.77■■■□□ 2.52
PKP3-206ENST00000528036 BTBD11A6QL63 1104 aa30.77■■■□□ 2.52
PKP3-206ENST00000528036 NARFQ9UHQ1 456 aa30.77■■■□□ 2.52
PKP3-206ENST00000528036 HEG1Q9ULI3 1381 aa30.77■■■□□ 2.52
PKP3-206ENST00000528036 ZNF496Q96IT1 587 aaPredicted RBP30.76■■■□□ 2.51
PKP3-206ENST00000528036 SRP68Q9UHB9 627 aaKnown RBP30.76■■■□□ 2.51
PKP3-206ENST00000528036 C10orf71Q711Q0 1435 aa30.75■■■□□ 2.51
PKP3-206ENST00000528036 FKBP8Q14318 412 aa30.75■■■□□ 2.51
PKP3-206ENST00000528036 ZBTB1Q9Y2K1 713 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms