RNA–Protein interactions for RNA: ENST00000527945.2

LINC00958-203, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,121 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-203ENST00000527945 TMOD3Q9NYL9 352 aa12.35□□□□□ -0.43
LINC00958-203ENST00000527945 U2SURPO15042 1029 aaKnown RBP12.34□□□□□ -0.43
LINC00958-203ENST00000527945 ZBTB7AO95365 584 aa12.34□□□□□ -0.43
LINC00958-203ENST00000527945 AKAP4Q5JQC9 854 aa12.34□□□□□ -0.43
LINC00958-203ENST00000527945 MPRIPQ6WCQ1 1025 aa12.34□□□□□ -0.43
LINC00958-203ENST00000527945 PIGBQ92521 554 aa12.34□□□□□ -0.43
LINC00958-203ENST00000527945 PHACTR3Q96KR7 559 aa12.34□□□□□ -0.43
LINC00958-203ENST00000527945 PNPLA7Q6ZV29 1317 aa12.34□□□□□ -0.43
LINC00958-203ENST00000527945 MTHFSDQ2M296 383 aaKnown RBP12.33□□□□□ -0.44
LINC00958-203ENST00000527945 CCNL1Q9UK58 526 aaPredicted RBP12.33□□□□□ -0.44
LINC00958-203ENST00000527945 UBR2Q8IWV8 1755 aa12.33□□□□□ -0.44
LINC00958-203ENST00000527945 C5P01031 1676 aa12.32□□□□□ -0.44
LINC00958-203ENST00000527945 PALLDQ8WX93 1383 aa12.32□□□□□ -0.44
LINC00958-203ENST00000527945 PRKAR2BP31323 418 aa12.32□□□□□ -0.44
LINC00958-203ENST00000527945 PLEKHF1Q96S99 279 aa12.32□□□□□ -0.44
LINC00958-203ENST00000527945 SYT17Q9BSW7 474 aa12.32□□□□□ -0.44
LINC00958-203ENST00000527945 PPP1R1BQ9UD71 204 aaPredicted RBP12.32□□□□□ -0.44
LINC00958-203ENST00000527945 TJP1Q07157 1748 aa12.31□□□□□ -0.44
LINC00958-203ENST00000527945 FCHSD2O94868 740 aa12.31□□□□□ -0.44
LINC00958-203ENST00000527945 FLAD1Q8NFF5 587 aa12.31□□□□□ -0.44
LINC00958-203ENST00000527945 GAS2L2Q8NHY3 880 aa12.31□□□□□ -0.44
LINC00958-203ENST00000527945 ATF5Q9Y2D1 282 aaPredicted RBP12.31□□□□□ -0.44
LINC00958-203ENST00000527945 COL5A3P25940 1745 aaPredicted RBP12.31□□□□□ -0.44
LINC00958-203ENST00000527945 COL24A1Q17RW2 1714 aa12.31□□□□□ -0.44
LINC00958-203ENST00000527945 U2AF1L5P0DN76 240 aaPredicted RBP12.3□□□□□ -0.44
LINC00958-203ENST00000527945 CABP4P57796 275 aa12.3□□□□□ -0.44
LINC00958-203ENST00000527945 U2AF1Q01081 240 aaKnown RBP eCLIP12.3□□□□□ -0.44
LINC00958-203ENST00000527945 QSER1Q2KHR3 1735 aa12.3□□□□□ -0.44
LINC00958-203ENST00000527945 CICQ96RK0 1608 aaPredicted RBP12.29□□□□□ -0.44
LINC00958-203ENST00000527945 ZNF831Q5JPB2 1677 aa12.29□□□□□ -0.44
LINC00958-203ENST00000527945 LOC102724428A0A0B4J2F2 783 aa12.29□□□□□ -0.44
LINC00958-203ENST00000527945 SIK1P57059 783 aa12.29□□□□□ -0.44
LINC00958-203ENST00000527945 ARXQ96QS3 562 aa12.29□□□□□ -0.44
LINC00958-203ENST00000527945 FHDC1Q9C0D6 1143 aaPredicted RBP12.29□□□□□ -0.44
LINC00958-203ENST00000527945 PNNQ9H307 717 aaKnown RBP12.29□□□□□ -0.44
LINC00958-203ENST00000527945 LGR6Q9HBX8 967 aa12.29□□□□□ -0.44
LINC00958-203ENST00000527945 TFCP2L1Q9NZI6 479 aa12.29□□□□□ -0.44
LINC00958-203ENST00000527945 UTRNP46939 3433 aa12.28□□□□□ -0.44
LINC00958-203ENST00000527945 DCAF8L1A6NGE4 600 aa12.28□□□□□ -0.44
LINC00958-203ENST00000527945 KCNQ4P56696 695 aa12.28□□□□□ -0.44
LINC00958-203ENST00000527945 ATG3Q9NT62 314 aa12.28□□□□□ -0.44
LINC00958-203ENST00000527945 KCPQ6ZWJ8 1503 aa12.27□□□□□ -0.44
LINC00958-203ENST00000527945 COL23A1Q86Y22 540 aaPredicted RBP12.27□□□□□ -0.45
LINC00958-203ENST00000527945 SLC52A2Q9HAB3 445 aa12.27□□□□□ -0.45
LINC00958-203ENST00000527945 ASAP1Q9ULH1 1129 aa12.27□□□□□ -0.45
LINC00958-203ENST00000527945 KDM3BQ7LBC6 1761 aa12.27□□□□□ -0.45
LINC00958-203ENST00000527945 UBR3Q6ZT12 1888 aa12.27□□□□□ -0.45
LINC00958-203ENST00000527945 MYH14Q7Z406 1995 aaKnown RBP12.27□□□□□ -0.45
LINC00958-203ENST00000527945 C4BP0C0L5 1744 aa12.26□□□□□ -0.45
LINC00958-203ENST00000527945 GNAT3A8MTJ3 354 aa12.26□□□□□ -0.45
LINC00958-203ENST00000527945 RNMTO43148 476 aaKnown RBP12.26□□□□□ -0.45
LINC00958-203ENST00000527945 HTATSF1O43719 755 aaKnown RBP12.26□□□□□ -0.45
LINC00958-203ENST00000527945 NEFMP07197 916 aa12.26□□□□□ -0.45
LINC00958-203ENST00000527945 RC3H1Q5TC82 1133 aaKnown RBP12.26□□□□□ -0.45
LINC00958-203ENST00000527945 NFATC2IPQ8NCF5 419 aa12.26□□□□□ -0.45
LINC00958-203ENST00000527945 IL17REQ8NFR9 667 aa12.26□□□□□ -0.45
LINC00958-203ENST00000527945 CEMIPQ8WUJ3 1361 aa12.26□□□□□ -0.45
LINC00958-203ENST00000527945 ATP6V1AP38606 617 aa12.25□□□□□ -0.45
LINC00958-203ENST00000527945 SLC4A9Q96Q91 983 aa12.25□□□□□ -0.45
LINC00958-203ENST00000527945 SSFA2P28290 1259 aa12.24□□□□□ -0.45
LINC00958-203ENST00000527945 POLD1P28340 1107 aa12.24□□□□□ -0.45
LINC00958-203ENST00000527945 CCDC146Q8IYE0 955 aa12.24□□□□□ -0.45
LINC00958-203ENST00000527945 AK7Q96M32 723 aa12.24□□□□□ -0.45
LINC00958-203ENST00000527945 ADAMTS8Q9UP79 889 aa12.24□□□□□ -0.45
LINC00958-203ENST00000527945 DCTN1Q14203 1278 aa12.23□□□□□ -0.45
LINC00958-203ENST00000527945 VSIG10Q8N0Z9 540 aa12.23□□□□□ -0.45
LINC00958-203ENST00000527945 CNTNAP4Q9C0A0 1308 aa12.22□□□□□ -0.45
LINC00958-203ENST00000527945 ANP32CO43423 234 aa12.22□□□□□ -0.45
LINC00958-203ENST00000527945 TEFQ10587 303 aa12.22□□□□□ -0.45
LINC00958-203ENST00000527945 ITPK1Q13572 414 aa12.22□□□□□ -0.45
LINC00958-203ENST00000527945 AMIGO3Q86WK7 504 aa12.22□□□□□ -0.45
LINC00958-203ENST00000527945 C4AP0C0L4 1744 aa12.22□□□□□ -0.45
LINC00958-203ENST00000527945 YY1P25490 414 aa12.21□□□□□ -0.45
LINC00958-203ENST00000527945 MCM10Q7L590 875 aa12.21□□□□□ -0.45
LINC00958-203ENST00000527945 LINC00116Q8NCU8 138 aa12.21□□□□□ -0.45
LINC00958-203ENST00000527945 PNISRQ8TF01 805 aaKnown RBP12.21□□□□□ -0.45
LINC00958-203ENST00000527945 RTF1Q92541 710 aaKnown RBP12.21□□□□□ -0.45
LINC00958-203ENST00000527945 RBM42Q9BTD8 480 aaKnown RBP12.21□□□□□ -0.45
LINC00958-203ENST00000527945 THUMPD2Q9BTF0 503 aaKnown RBP12.21□□□□□ -0.45
LINC00958-203ENST00000527945 CD2APQ9Y5K6 639 aa12.21□□□□□ -0.45
LINC00958-203ENST00000527945 GOLGB1Q14789 3259 aaKnown RBP12.2□□□□□ -0.46
LINC00958-203ENST00000527945 SLC39A6Q13433 755 aa12.2□□□□□ -0.46
LINC00958-203ENST00000527945 NFE2L2Q16236 605 aa12.2□□□□□ -0.46
LINC00958-203ENST00000527945 TEX13AQ9BXU3 409 aaPredicted RBP12.2□□□□□ -0.46
LINC00958-203ENST00000527945 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.19□□□□□ -0.46
LINC00958-203ENST00000527945 KCNQ3O43525 872 aa12.19□□□□□ -0.46
LINC00958-203ENST00000527945 RPS6KA4O75676 772 aa12.19□□□□□ -0.46
LINC00958-203ENST00000527945 SMIM5Q71RC9 77 aa12.19□□□□□ -0.46
LINC00958-203ENST00000527945 RRP7AQ9Y3A4 280 aaKnown RBP12.19□□□□□ -0.46
LINC00958-203ENST00000527945 RTCBQ9Y3I0 505 aaKnown RBP12.19□□□□□ -0.46
LINC00958-203ENST00000527945 LAMB4A4D0S4 1761 aa12.19□□□□□ -0.46
LINC00958-203ENST00000527945 SENP3-EIF4A1A0A087X0R7 540 aa12.18□□□□□ -0.46
LINC00958-203ENST00000527945 GNPATO15228 680 aa12.18□□□□□ -0.46
LINC00958-203ENST00000527945 PTCD1O75127 700 aaKnown RBP12.18□□□□□ -0.46
LINC00958-203ENST00000527945 TMPOP42166 694 aaKnown RBP12.18□□□□□ -0.46
LINC00958-203ENST00000527945 TRAPPC3LQ5T215 181 aa12.18□□□□□ -0.46
LINC00958-203ENST00000527945 ZNF790Q6PG37 636 aa12.18□□□□□ -0.46
LINC00958-203ENST00000527945 TTC5Q8N0Z6 440 aa12.18□□□□□ -0.46
LINC00958-203ENST00000527945 MRS2Q9HD23 443 aa12.18□□□□□ -0.46
LINC00958-203ENST00000527945 TRIM35Q9UPQ4 493 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms