RNA–Protein interactions for RNA: ENST00000527902.5

NXF1-206, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-206ENST00000527902 PNISRQ8TF01 805 aaKnown RBP23.58■■□□□ 1.37
NXF1-206ENST00000527902 PNNQ9H307 717 aaKnown RBP23.58■■□□□ 1.37
NXF1-206ENST00000527902 ATG3Q9NT62 314 aa23.58■■□□□ 1.37
NXF1-206ENST00000527902 NFE2L2Q16236 605 aa23.57■■□□□ 1.36
NXF1-206ENST00000527902 C5P01031 1676 aa23.57■■□□□ 1.36
NXF1-206ENST00000527902 NEFMP07197 916 aa23.56■■□□□ 1.36
NXF1-206ENST00000527902 DCTN1Q14203 1278 aa23.55■■□□□ 1.36
NXF1-206ENST00000527902 DIEXFQ68CQ4 756 aaKnown RBP23.55■■□□□ 1.36
NXF1-206ENST00000527902 MCM10Q7L590 875 aa23.55■■□□□ 1.36
NXF1-206ENST00000527902 RUNDC1Q96C34 613 aa23.55■■□□□ 1.36
NXF1-206ENST00000527902 ANO8Q9HCE9 1232 aaPredicted RBP23.55■■□□□ 1.36
NXF1-206ENST00000527902 SMARCC1Q92922 1105 aaPredicted RBP23.54■■□□□ 1.36
NXF1-206ENST00000527902 UBR2Q8IWV8 1755 aa23.54■■□□□ 1.36
NXF1-206ENST00000527902 SLC27A3Q5K4L6 730 aa23.53■■□□□ 1.36
NXF1-206ENST00000527902 CCNL1Q9UK58 526 aaPredicted RBP23.53■■□□□ 1.36
NXF1-206ENST00000527902 TUBGCP6Q96RT7 1819 aa23.53■■□□□ 1.36
NXF1-206ENST00000527902 ZNF831Q5JPB2 1677 aa23.52■■□□□ 1.36
NXF1-206ENST00000527902 HTATSF1O43719 755 aaKnown RBP23.52■■□□□ 1.36
NXF1-206ENST00000527902 TMPOP42166 694 aaKnown RBP23.52■■□□□ 1.36
NXF1-206ENST00000527902 RRP7AQ9Y3A4 280 aaKnown RBP23.52■■□□□ 1.36
NXF1-206ENST00000527902 KCPQ6ZWJ8 1503 aa23.51■■□□□ 1.35
NXF1-206ENST00000527902 RTF1Q92541 710 aaKnown RBP23.51■■□□□ 1.35
NXF1-206ENST00000527902 SLC4A9Q96Q91 983 aa23.51■■□□□ 1.35
NXF1-206ENST00000527902 TJP1Q07157 1748 aa23.5■■□□□ 1.35
NXF1-206ENST00000527902 SLC39A6Q13433 755 aa23.5■■□□□ 1.35
NXF1-206ENST00000527902 COL5A3P25940 1745 aaPredicted RBP23.5■■□□□ 1.35
NXF1-206ENST00000527902 LOC102724428A0A0B4J2F2 783 aa23.49■■□□□ 1.35
NXF1-206ENST00000527902 PSDA5PKW4 1024 aaPredicted RBP23.49■■□□□ 1.35
NXF1-206ENST00000527902 SIK1P57059 783 aa23.49■■□□□ 1.35
NXF1-206ENST00000527902 RIPK4P57078 832 aa23.49■■□□□ 1.35
NXF1-206ENST00000527902 TEFQ10587 303 aa23.49■■□□□ 1.35
NXF1-206ENST00000527902 THUMPD2Q9BTF0 503 aaKnown RBP23.49■■□□□ 1.35
NXF1-206ENST00000527902 CICQ96RK0 1608 aaPredicted RBP23.48■■□□□ 1.35
NXF1-206ENST00000527902 R3HDM1Q15032 1099 aaKnown RBP23.48■■□□□ 1.35
NXF1-206ENST00000527902 ZNF827Q17R98 1081 aa23.48■■□□□ 1.35
NXF1-206ENST00000527902 C4BP0C0L5 1744 aa23.47■■□□□ 1.35
NXF1-206ENST00000527902 ITPK1Q13572 414 aa23.47■■□□□ 1.35
NXF1-206ENST00000527902 NEUROD2Q15784 382 aa23.47■■□□□ 1.35
NXF1-206ENST00000527902 NBPF14Q5TI25 921 aa23.47■■□□□ 1.35
NXF1-206ENST00000527902 APAF1O14727 1248 aa23.46■■□□□ 1.35
NXF1-206ENST00000527902 PTCD1O75127 700 aaKnown RBP23.46■■□□□ 1.35
NXF1-206ENST00000527902 QSER1Q2KHR3 1735 aa23.46■■□□□ 1.35
NXF1-206ENST00000527902 KDM3BQ7LBC6 1761 aa23.46■■□□□ 1.35
NXF1-206ENST00000527902 RBM42Q9BTD8 480 aaKnown RBP23.46■■□□□ 1.35
NXF1-206ENST00000527902 AKT1S1Q96B36 256 aa23.45■■□□□ 1.34
NXF1-206ENST00000527902 TRIM35Q9UPQ4 493 aa23.45■■□□□ 1.34
NXF1-206ENST00000527902 CASZ1Q86V15 1759 aa23.45■■□□□ 1.34
NXF1-206ENST00000527902 ATP6V1AP38606 617 aa23.44■■□□□ 1.34
NXF1-206ENST00000527902 SLC15A2Q16348 729 aa23.44■■□□□ 1.34
NXF1-206ENST00000527902 LINC00116Q8NCU8 138 aa23.44■■□□□ 1.34
NXF1-206ENST00000527902 MYH14Q7Z406 1995 aaKnown RBP23.43■■□□□ 1.34
NXF1-206ENST00000527902 UBR3Q6ZT12 1888 aa23.43■■□□□ 1.34
NXF1-206ENST00000527902 SENP3-EIF4A1A0A087X0R7 540 aa23.43■■□□□ 1.34
NXF1-206ENST00000527902 KCNQ3O43525 872 aa23.43■■□□□ 1.34
NXF1-206ENST00000527902 FAM9BQ8IZU0 186 aa23.43■■□□□ 1.34
NXF1-206ENST00000527902 MIER1Q8N108 512 aa23.43■■□□□ 1.34
NXF1-206ENST00000527902 STK32BQ9NY57 414 aa23.43■■□□□ 1.34
NXF1-206ENST00000527902 BTBD11A6QL63 1104 aa23.42■■□□□ 1.34
NXF1-206ENST00000527902 CCER2I3L3R5 266 aa23.42■■□□□ 1.34
NXF1-206ENST00000527902 ZNF790Q6PG37 636 aa23.42■■□□□ 1.34
NXF1-206ENST00000527902 LMOD3Q0VAK6 560 aa23.4■■□□□ 1.34
NXF1-206ENST00000527902 TAF7Q15545 349 aaPredicted RBP23.4■■□□□ 1.34
NXF1-206ENST00000527902 PDGFDQ9GZP0 370 aaPredicted RBP23.4■■□□□ 1.34
NXF1-206ENST00000527902 MIS18AQ9NYP9 233 aa23.4■■□□□ 1.34
NXF1-206ENST00000527902 TTC5Q8N0Z6 440 aa23.39■■□□□ 1.33
NXF1-206ENST00000527902 ZNF496Q96IT1 587 aaPredicted RBP23.39■■□□□ 1.33
NXF1-206ENST00000527902 AMIGO3Q86WK7 504 aa23.38■■□□□ 1.33
NXF1-206ENST00000527902 DNAJC10Q8IXB1 793 aa23.37■■□□□ 1.33
NXF1-206ENST00000527902 HEG1Q9ULI3 1381 aa23.36■■□□□ 1.33
NXF1-206ENST00000527902 PNPLA7Q6ZV29 1317 aa23.35■■□□□ 1.33
NXF1-206ENST00000527902 SMIM5Q71RC9 77 aa23.35■■□□□ 1.33
NXF1-206ENST00000527902 VSIG10Q8N0Z9 540 aa23.34■■□□□ 1.33
NXF1-206ENST00000527902 TFCP2L1Q9NZI6 479 aa23.34■■□□□ 1.33
NXF1-206ENST00000527902 AK7Q96M32 723 aa23.33■■□□□ 1.33
NXF1-206ENST00000527902 FMNL2Q96PY5 1086 aa23.33■■□□□ 1.33
NXF1-206ENST00000527902 CNTNAP4Q9C0A0 1308 aa23.33■■□□□ 1.32
NXF1-206ENST00000527902 LAMB4A4D0S4 1761 aa23.32■■□□□ 1.32
NXF1-206ENST00000527902 PRAMEF22A3QJZ6 481 aa23.31■■□□□ 1.32
NXF1-206ENST00000527902 CYP19A1P11511 503 aaPredicted RBP23.31■■□□□ 1.32
NXF1-206ENST00000527902 CRKLP46109 303 aaKnown RBP23.31■■□□□ 1.32
NXF1-206ENST00000527902 SRCAPQ6ZRS2 3230 aa23.31■■□□□ 1.32
NXF1-206ENST00000527902 C4AP0C0L4 1744 aa23.3■■□□□ 1.32
NXF1-206ENST00000527902 GNPATO15228 680 aa23.3■■□□□ 1.32
NXF1-206ENST00000527902 RC3H1Q5TC82 1133 aaKnown RBP23.3■■□□□ 1.32
NXF1-206ENST00000527902 HMGB2P26583 209 aaKnown RBP23.29■■□□□ 1.32
NXF1-206ENST00000527902 EIF4A1P60842 406 aaKnown RBP23.29■■□□□ 1.32
NXF1-206ENST00000527902 INTS5Q6P9B9 1019 aaKnown RBP23.29■■□□□ 1.32
NXF1-206ENST00000527902 COL23A1Q86Y22 540 aaPredicted RBP23.29■■□□□ 1.32
NXF1-206ENST00000527902 TSPYL4Q9UJ04 414 aa23.29■■□□□ 1.32
NXF1-206ENST00000527902 CHL1O00533 1208 aa23.28■■□□□ 1.32
NXF1-206ENST00000527902 PHF14O94880 888 aa23.28■■□□□ 1.32
NXF1-206ENST00000527902 CCDC27Q2M243 656 aa23.28■■□□□ 1.32
NXF1-206ENST00000527902 LRP5O75197 1615 aa23.27■■□□□ 1.32
NXF1-206ENST00000527902 WWC1Q8IX03 1113 aa23.27■■□□□ 1.32
NXF1-206ENST00000527902 BABAM1Q9NWV8 329 aa23.27■■□□□ 1.32
NXF1-206ENST00000527902 SALL2Q9Y467 1007 aaPredicted RBP23.27■■□□□ 1.32
NXF1-206ENST00000527902 LAS1LQ9Y4W2 734 aaKnown RBP23.27■■□□□ 1.32
NXF1-206ENST00000527902 COL24A1Q17RW2 1714 aa23.27■■□□□ 1.32
NXF1-206ENST00000527902 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.26■■□□□ 1.31
NXF1-206ENST00000527902 ZBTB7AO95365 584 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms