RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 CABP4P57796 275 aa26.06■■□□□ 1.76
CAPN1-211ENST00000527739 ERVV-2B6SEH9 535 aa26.05■■□□□ 1.76
CAPN1-211ENST00000527739 DIAPH1O60610 1272 aaKnown RBP26.05■■□□□ 1.76
CAPN1-211ENST00000527739 PLEKHG2Q9H7P9 1386 aa26.05■■□□□ 1.76
CAPN1-211ENST00000527739 ATP6V1AP38606 617 aa26.04■■□□□ 1.76
CAPN1-211ENST00000527739 ATG3Q9NT62 314 aa26.04■■□□□ 1.76
CAPN1-211ENST00000527739 RBM42Q9BTD8 480 aaKnown RBP26.03■■□□□ 1.76
CAPN1-211ENST00000527739 PHF14O94880 888 aa26.02■■□□□ 1.76
CAPN1-211ENST00000527739 FLAD1Q8NFF5 587 aa26.02■■□□□ 1.76
CAPN1-211ENST00000527739 TAF1LQ8IZX4 1826 aa26.02■■□□□ 1.76
CAPN1-211ENST00000527739 YBX3P16989 372 aaKnown RBP eCLIP26.01■■□□□ 1.753e-6■□□□□ 8.1
CAPN1-211ENST00000527739 ITGB4P16144 1822 aa26■■□□□ 1.75
CAPN1-211ENST00000527739 NPC1L1Q9UHC9 1359 aa26■■□□□ 1.75
CAPN1-211ENST00000527739 U2SURPO15042 1029 aaKnown RBP26■■□□□ 1.75
CAPN1-211ENST00000527739 SMIM5Q71RC9 77 aa26■■□□□ 1.75
CAPN1-211ENST00000527739 AMIGO3Q86WK7 504 aa26■■□□□ 1.75
CAPN1-211ENST00000527739 LINC00116Q8NCU8 138 aa26■■□□□ 1.75
CAPN1-211ENST00000527739 C1QTNF8P60827 252 aa25.99■■□□□ 1.75
CAPN1-211ENST00000527739 KDRP35968 1356 aa25.98■■□□□ 1.75
CAPN1-211ENST00000527739 ITPK1Q13572 414 aa25.98■■□□□ 1.75
CAPN1-211ENST00000527739 NFATC2IPQ8NCF5 419 aa25.97■■□□□ 1.75
CAPN1-211ENST00000527739 C4BP0C0L5 1744 aa25.97■■□□□ 1.75
CAPN1-211ENST00000527739 AKAP4Q5JQC9 854 aa25.96■■□□□ 1.75
CAPN1-211ENST00000527739 KDM6AO15550 1401 aaPredicted RBP25.96■■□□□ 1.75
CAPN1-211ENST00000527739 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.95■■□□□ 1.74
CAPN1-211ENST00000527739 GNPATO15228 680 aa25.95■■□□□ 1.74
CAPN1-211ENST00000527739 SENP3-EIF4A1A0A087X0R7 540 aa25.94■■□□□ 1.74
CAPN1-211ENST00000527739 PTCD1O75127 700 aaKnown RBP25.94■■□□□ 1.74
CAPN1-211ENST00000527739 CFAP53Q96M91 514 aa25.93■■□□□ 1.74
CAPN1-211ENST00000527739 MTHFSDQ2M296 383 aaKnown RBP25.92■■□□□ 1.74
CAPN1-211ENST00000527739 LGR6Q9HBX8 967 aa25.92■■□□□ 1.74
CAPN1-211ENST00000527739 SSFA2P28290 1259 aa25.91■■□□□ 1.74
CAPN1-211ENST00000527739 UBR3Q6ZT12 1888 aa25.9■■□□□ 1.74
CAPN1-211ENST00000527739 SLC4A9Q96Q91 983 aa25.9■■□□□ 1.74
CAPN1-211ENST00000527739 GRIN3BO60391 1043 aa25.89■■□□□ 1.74
CAPN1-211ENST00000527739 CD2APQ9Y5K6 639 aa25.89■■□□□ 1.74
CAPN1-211ENST00000527739 RNMTO43148 476 aaKnown RBP25.88■■□□□ 1.73
CAPN1-211ENST00000527739 GIGYF1O75420 1035 aaPredicted RBP25.88■■□□□ 1.73
CAPN1-211ENST00000527739 SLC52A2Q9HAB3 445 aa25.87■■□□□ 1.73
CAPN1-211ENST00000527739 RTCBQ9Y3I0 505 aaKnown RBP25.87■■□□□ 1.73
CAPN1-211ENST00000527739 PPP2R1AP30153 589 aa25.86■■□□□ 1.73
CAPN1-211ENST00000527739 TRAPPC3LQ5T215 181 aa25.86■■□□□ 1.73
CAPN1-211ENST00000527739 NUDCQ9Y266 331 aa25.86■■□□□ 1.73
CAPN1-211ENST00000527739 WWC3Q9ULE0 1092 aa25.84■■□□□ 1.73
CAPN1-211ENST00000527739 RC3H1Q5TC82 1133 aaKnown RBP25.83■■□□□ 1.73
CAPN1-211ENST00000527739 SLC39A6Q13433 755 aa25.82■■□□□ 1.72
CAPN1-211ENST00000527739 COL3A1P02461 1466 aaPredicted RBP25.82■■□□□ 1.72
CAPN1-211ENST00000527739 ATP10DQ9P241 1426 aa25.81■■□□□ 1.72
CAPN1-211ENST00000527739 U2AF1L5P0DN76 240 aaPredicted RBP25.81■■□□□ 1.72
CAPN1-211ENST00000527739 U2AF1Q01081 240 aaKnown RBP eCLIP25.81■■□□□ 1.72
CAPN1-211ENST00000527739 GAS2L2Q8NHY3 880 aa25.81■■□□□ 1.72
CAPN1-211ENST00000527739 RPS6KA4O75676 772 aa25.8■■□□□ 1.72
CAPN1-211ENST00000527739 PRKAR2BP31323 418 aa25.8■■□□□ 1.72
CAPN1-211ENST00000527739 ARHGEF1Q92888 912 aaKnown RBP25.8■■□□□ 1.72
CAPN1-211ENST00000527739 CNTNAP4Q9C0A0 1308 aa25.8■■□□□ 1.72
CAPN1-211ENST00000527739 RFC4P35249 363 aa25.79■■□□□ 1.72
CAPN1-211ENST00000527739 CRKLP46109 303 aaKnown RBP25.79■■□□□ 1.72
CAPN1-211ENST00000527739 GNAT3A8MTJ3 354 aa25.78■■□□□ 1.72
CAPN1-211ENST00000527739 TEFQ10587 303 aa25.77■■□□□ 1.72
CAPN1-211ENST00000527739 PHACTR3Q96KR7 559 aa25.77■■□□□ 1.72
CAPN1-211ENST00000527739 ADRA2BP18089 450 aa25.76■■□□□ 1.71
CAPN1-211ENST00000527739 DNAJC10Q8IXB1 793 aa25.76■■□□□ 1.71
CAPN1-211ENST00000527739 MMP10P09238 476 aa25.75■■□□□ 1.71
CAPN1-211ENST00000527739 NLGN1Q8N2Q7 840 aa25.75■■□□□ 1.71
CAPN1-211ENST00000527739 RSPH6AQ9H0K4 717 aa25.75■■□□□ 1.71
CAPN1-211ENST00000527739 ADCY9O60503 1353 aa25.74■■□□□ 1.71
CAPN1-211ENST00000527739 TTC5Q8N0Z6 440 aa25.74■■□□□ 1.71
CAPN1-211ENST00000527739 IL17REQ8NFR9 667 aa25.74■■□□□ 1.71
CAPN1-211ENST00000527739 INTS5Q6P9B9 1019 aaKnown RBP25.71■■□□□ 1.71
CAPN1-211ENST00000527739 ZNF526Q8TF50 670 aaPredicted RBP25.71■■□□□ 1.71
CAPN1-211ENST00000527739 CCDC87Q9NVE4 849 aa25.71■■□□□ 1.71
CAPN1-211ENST00000527739 SCN11AQ9UI33 1791 aa25.7■■□□□ 1.7
CAPN1-211ENST00000527739 FCHSD2O94868 740 aa25.7■■□□□ 1.7
CAPN1-211ENST00000527739 GYS1P13807 737 aa25.7■■□□□ 1.7
CAPN1-211ENST00000527739 SRP68Q9UHB9 627 aaKnown RBP25.7■■□□□ 1.7
CAPN1-211ENST00000527739 RTF1Q92541 710 aaKnown RBP25.69■■□□□ 1.7
CAPN1-211ENST00000527739 GPBP1L1Q9HC44 474 aaPredicted RBP25.69■■□□□ 1.7
CAPN1-211ENST00000527739 CYP19A1P11511 503 aaPredicted RBP25.68■■□□□ 1.7
CAPN1-211ENST00000527739 DDX10Q13206 875 aaKnown RBP25.68■■□□□ 1.7
CAPN1-211ENST00000527739 PARP3Q9Y6F1 533 aa25.68■■□□□ 1.7
CAPN1-211ENST00000527739 KIAA1551Q9HCM1 1747 aa25.68■■□□□ 1.7
CAPN1-211ENST00000527739 MRC1P22897 1456 aa25.67■■□□□ 1.7
CAPN1-211ENST00000527739 COL5A3P25940 1745 aaPredicted RBP25.67■■□□□ 1.7
CAPN1-211ENST00000527739 CICQ96RK0 1608 aaPredicted RBP25.66■■□□□ 1.7
CAPN1-211ENST00000527739 PXDNLA1KZ92 1463 aa25.66■■□□□ 1.7
CAPN1-211ENST00000527739 ZPR1O75312 459 aa25.66■■□□□ 1.7
CAPN1-211ENST00000527739 NEFMP07197 916 aa25.66■■□□□ 1.7
CAPN1-211ENST00000527739 VSIG10Q8N0Z9 540 aa25.66■■□□□ 1.7
CAPN1-211ENST00000527739 ZNF831Q5JPB2 1677 aa25.66■■□□□ 1.7
CAPN1-211ENST00000527739 CEP350Q5VT06 3117 aa25.66■■□□□ 1.7
CAPN1-211ENST00000527739 CANXP27824 592 aaKnown RBP25.65■■□□□ 1.7
CAPN1-211ENST00000527739 ZNF790Q6PG37 636 aa25.65■■□□□ 1.7
CAPN1-211ENST00000527739 N4BP2Q86UW6 1770 aaPredicted RBP25.64■■□□□ 1.7
CAPN1-211ENST00000527739 BTBD11A6QL63 1104 aa25.64■■□□□ 1.7
CAPN1-211ENST00000527739 MCM10Q7L590 875 aa25.64■■□□□ 1.7
CAPN1-211ENST00000527739 ZNF496Q96IT1 587 aaPredicted RBP25.64■■□□□ 1.7
CAPN1-211ENST00000527739 KIF13BQ9NQT8 1826 aa25.64■■□□□ 1.7
CAPN1-211ENST00000527739 STARD3NLO95772 234 aa25.63■■□□□ 1.69
CAPN1-211ENST00000527739 FKBP8Q14318 412 aa25.63■■□□□ 1.69
CAPN1-211ENST00000527739 ZBTB1Q9Y2K1 713 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms