RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 A0A0G2JLW4 131 aa13.81□□□□□ -0.2
CAPN1-210ENST00000527699 PHF14O94880 888 aa13.81□□□□□ -0.2
CAPN1-210ENST00000527699 PXDNLA1KZ92 1463 aa13.8□□□□□ -0.2
CAPN1-210ENST00000527699 CARD14Q9BXL6 1004 aa13.8□□□□□ -0.2
CAPN1-210ENST00000527699 SMG6Q86US8 1419 aaKnown RBP13.8□□□□□ -0.2
CAPN1-210ENST00000527699 RTL1A6NKG5 1358 aa13.79□□□□□ -0.2
CAPN1-210ENST00000527699 C5P01031 1676 aa13.79□□□□□ -0.2
CAPN1-210ENST00000527699 TNNT2P45379 298 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-210ENST00000527699 AK7Q96M32 723 aa13.78□□□□□ -0.2
CAPN1-210ENST00000527699 CREBZFQ9NS37 354 aa13.78□□□□□ -0.2
CAPN1-210ENST00000527699 CYP27B1O15528 508 aa13.77□□□□□ -0.21
CAPN1-210ENST00000527699 VEGFAP15692 232 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-210ENST00000527699 AMIGO3Q86WK7 504 aa13.77□□□□□ -0.21
CAPN1-210ENST00000527699 NSD3Q9BZ95 1437 aa13.76□□□□□ -0.21
CAPN1-210ENST00000527699 INSRP06213 1382 aa13.76□□□□□ -0.21
CAPN1-210ENST00000527699 PALLDQ8WX93 1383 aa13.76□□□□□ -0.21
CAPN1-210ENST00000527699 PCDH11XQ9BZA7 1347 aa13.76□□□□□ -0.21
CAPN1-210ENST00000527699 PCDH11YQ9BZA8 1340 aa13.76□□□□□ -0.21
CAPN1-210ENST00000527699 HSPA8P11142 646 aaKnown RBP13.75□□□□□ -0.21
CAPN1-210ENST00000527699 TGFB2P61812 414 aa13.75□□□□□ -0.21
CAPN1-210ENST00000527699 KIF20BQ96Q89 1820 aa13.75□□□□□ -0.21
CAPN1-210ENST00000527699 FLT4P35916 1363 aa13.74□□□□□ -0.21
CAPN1-210ENST00000527699 CNTNAP1P78357 1384 aa13.74□□□□□ -0.21
CAPN1-210ENST00000527699 SLC24A1O60721 1099 aa13.74□□□□□ -0.21
CAPN1-210ENST00000527699 DPEP1P16444 411 aa13.74□□□□□ -0.21
CAPN1-210ENST00000527699 PIGBQ92521 554 aa13.74□□□□□ -0.21
CAPN1-210ENST00000527699 TRIM26Q12899 539 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-210ENST00000527699 PCGF6Q9BYE7 350 aa13.73□□□□□ -0.21
CAPN1-210ENST00000527699 CGNL1Q0VF96 1302 aa13.72□□□□□ -0.21
CAPN1-210ENST00000527699 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.72□□□□□ -0.21
CAPN1-210ENST00000527699 MMP10P09238 476 aa13.72□□□□□ -0.21
CAPN1-210ENST00000527699 HMGB2P26583 209 aaKnown RBP13.72□□□□□ -0.21
CAPN1-210ENST00000527699 CDCA8Q53HL2 280 aa13.72□□□□□ -0.21
CAPN1-210ENST00000527699 EYA1Q99502 592 aa13.72□□□□□ -0.21
CAPN1-210ENST00000527699 WBP1LQ9NX94 342 aa13.72□□□□□ -0.21
CAPN1-210ENST00000527699 KIAA1551Q9HCM1 1747 aa13.72□□□□□ -0.21
CAPN1-210ENST00000527699 TNRC18O15417 2968 aaPredicted RBP13.71□□□□□ -0.21
CAPN1-210ENST00000527699 TOGARAM1Q9Y4F4 1720 aa13.71□□□□□ -0.21
CAPN1-210ENST00000527699 VEGFBP49765 207 aa13.71□□□□□ -0.21
CAPN1-210ENST00000527699 LINC00116Q8NCU8 138 aa13.71□□□□□ -0.21
CAPN1-210ENST00000527699 ASAP1Q9ULH1 1129 aa13.71□□□□□ -0.21
CAPN1-210ENST00000527699 TAF1LQ8IZX4 1826 aa13.71□□□□□ -0.22
CAPN1-210ENST00000527699 ARFGEF1Q9Y6D6 1849 aa13.71□□□□□ -0.22
CAPN1-210ENST00000527699 KIF13BQ9NQT8 1826 aa13.7□□□□□ -0.22
CAPN1-210ENST00000527699 SPG7Q9UQ90 795 aa13.7□□□□□ -0.22
CAPN1-210ENST00000527699 SBF1O95248 1867 aa13.7□□□□□ -0.22
CAPN1-210ENST00000527699 SMARCC1Q92922 1105 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-210ENST00000527699 TMOD3Q9NYL9 352 aa13.69□□□□□ -0.22
CAPN1-210ENST00000527699 POLKQ9UBT6 870 aa13.69□□□□□ -0.22
CAPN1-210ENST00000527699 C4BP0C0L5 1744 aa13.69□□□□□ -0.22
CAPN1-210ENST00000527699 GLTPD2A6NH11 291 aa13.68□□□□□ -0.22
CAPN1-210ENST00000527699 GNPATO15228 680 aa13.68□□□□□ -0.22
CAPN1-210ENST00000527699 ATP6V1AP38606 617 aa13.68□□□□□ -0.22
CAPN1-210ENST00000527699 ITPK1Q13572 414 aa13.68□□□□□ -0.22
CAPN1-210ENST00000527699 ITGB4P16144 1822 aa13.68□□□□□ -0.22
CAPN1-210ENST00000527699 BRCA1P38398 1863 aaKnown RBP13.67□□□□□ -0.22
CAPN1-210ENST00000527699 UBR3Q6ZT12 1888 aa13.67□□□□□ -0.22
CAPN1-210ENST00000527699 LOC102724428A0A0B4J2F2 783 aa13.67□□□□□ -0.22
CAPN1-210ENST00000527699 SIK1P57059 783 aa13.67□□□□□ -0.22
CAPN1-210ENST00000527699 EIF4A2Q14240 407 aaKnown RBP13.67□□□□□ -0.22
CAPN1-210ENST00000527699 DALRD3Q5D0E6 543 aaKnown RBP13.67□□□□□ -0.22
CAPN1-210ENST00000527699 PRPF38BQ5VTL8 546 aaKnown RBP13.67□□□□□ -0.22
CAPN1-210ENST00000527699 RBM42Q9BTD8 480 aaKnown RBP13.67□□□□□ -0.22
CAPN1-210ENST00000527699 CCDC87Q9NVE4 849 aa13.67□□□□□ -0.22
CAPN1-210ENST00000527699 PIM2Q9P1W9 311 aa13.67□□□□□ -0.22
CAPN1-210ENST00000527699 WASHC2AQ641Q2 1341 aa13.66□□□□□ -0.22
CAPN1-210ENST00000527699 PHKG2P15735 406 aa13.66□□□□□ -0.22
CAPN1-210ENST00000527699 RASSF7Q02833 373 aa13.66□□□□□ -0.22
CAPN1-210ENST00000527699 CHADLQ6NUI6 762 aa13.66□□□□□ -0.22
CAPN1-210ENST00000527699 VIRMAQ69YN4 1812 aaKnown RBP13.66□□□□□ -0.22
CAPN1-210ENST00000527699 SSFA2P28290 1259 aa13.65□□□□□ -0.22
CAPN1-210ENST00000527699 MAP2K1Q02750 393 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-210ENST00000527699 NKX1-1Q15270 411 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-210ENST00000527699 IFNL2Q8IZJ0 200 aa13.65□□□□□ -0.22
CAPN1-210ENST00000527699 DCAF5Q96JK2 942 aa13.65□□□□□ -0.22
CAPN1-210ENST00000527699 BEGAINQ9BUH8 593 aa13.65□□□□□ -0.22
CAPN1-210ENST00000527699 ATG3Q9NT62 314 aa13.65□□□□□ -0.22
CAPN1-210ENST00000527699 KIF24Q5T7B8 1368 aa13.64□□□□□ -0.23
CAPN1-210ENST00000527699 MAP2P11137 1827 aaKnown RBP13.64□□□□□ -0.23
CAPN1-210ENST00000527699 ZC3H4Q9UPT8 1303 aaKnown RBP13.64□□□□□ -0.23
CAPN1-210ENST00000527699 HSPA5P11021 654 aaKnown RBP13.63□□□□□ -0.23
CAPN1-210ENST00000527699 PANK3Q9H999 370 aa13.63□□□□□ -0.23
CAPN1-210ENST00000527699 SLC4A9Q96Q91 983 aa13.62□□□□□ -0.23
CAPN1-210ENST00000527699 MCOLN1Q9GZU1 580 aa13.62□□□□□ -0.23
CAPN1-210ENST00000527699 TMEM88BA6NKF7 163 aa13.61□□□□□ -0.23
CAPN1-210ENST00000527699 ZNF530Q6P9A1 599 aaPredicted RBP13.61□□□□□ -0.23
CAPN1-210ENST00000527699 PARP3Q9Y6F1 533 aa13.61□□□□□ -0.23
CAPN1-210ENST00000527699 NCAPD2Q15021 1401 aa13.61□□□□□ -0.23
CAPN1-210ENST00000527699 PTCD1O75127 700 aaKnown RBP13.6□□□□□ -0.23
CAPN1-210ENST00000527699 KCNA3P22001 575 aa13.6□□□□□ -0.23
CAPN1-210ENST00000527699 DPY19L2Q6NUT2 758 aa13.6□□□□□ -0.23
CAPN1-210ENST00000527699 AEBP1Q8IUX7 1158 aa13.6□□□□□ -0.23
CAPN1-210ENST00000527699 TIAM2Q8IVF5 1701 aa13.6□□□□□ -0.23
CAPN1-210ENST00000527699 ZNF219Q9P2Y4 722 aaPredicted RBP13.6□□□□□ -0.23
CAPN1-210ENST00000527699 CCDC88AQ3V6T2 1871 aa13.59□□□□□ -0.23
CAPN1-210ENST00000527699 POTEIP0CG38 1075 aa13.59□□□□□ -0.23
CAPN1-210ENST00000527699 POTEJP0CG39 1038 aa13.59□□□□□ -0.23
CAPN1-210ENST00000527699 LMNB1P20700 586 aa13.59□□□□□ -0.23
CAPN1-210ENST00000527699 CABP4P57796 275 aa13.59□□□□□ -0.23
CAPN1-210ENST00000527699 CNGB1Q14028 1251 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms