RNA–Protein interactions for RNA: ENST00000527389.2

ATM-211, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-211ENST00000527389 SPATA31C2B4DYI2 1134 aa10.96□□□□□ -0.65
ATM-211ENST00000527389 RFX1P22670 979 aa10.96□□□□□ -0.65
ATM-211ENST00000527389 PTK7Q13308 1070 aa10.96□□□□□ -0.65
ATM-211ENST00000527389 CRTC2Q53ET0 693 aaPredicted RBP10.96□□□□□ -0.65
ATM-211ENST00000527389 ZNF358Q9NW07 568 aa10.96□□□□□ -0.65
ATM-211ENST00000527389 USP17L15C9J2P7 530 aa10.95□□□□□ -0.66
ATM-211ENST00000527389 USP17L10C9JJH3 530 aa10.95□□□□□ -0.66
ATM-211ENST00000527389 USP17L13C9JLJ4 530 aa10.95□□□□□ -0.66
ATM-211ENST00000527389 USP17L12C9JPN9 530 aa10.95□□□□□ -0.66
ATM-211ENST00000527389 USP17L11C9JVI0 530 aa10.95□□□□□ -0.66
ATM-211ENST00000527389 USP17L21D6R901 530 aa10.95□□□□□ -0.66
ATM-211ENST00000527389 USP17L18D6R9N7 530 aa10.95□□□□□ -0.66
ATM-211ENST00000527389 USP17L22D6RA61 530 aa10.95□□□□□ -0.66
ATM-211ENST00000527389 USP17L17D6RBQ6 530 aa10.95□□□□□ -0.66
ATM-211ENST00000527389 USP17L19D6RCP7 530 aa10.95□□□□□ -0.66
ATM-211ENST00000527389 USP17L20D6RJB6 530 aa10.95□□□□□ -0.66
ATM-211ENST00000527389 M0R2N6 131 aa10.95□□□□□ -0.66
ATM-211ENST00000527389 SUPT5HO00267 1087 aaKnown RBP10.95□□□□□ -0.66
ATM-211ENST00000527389 USP17L24Q0WX57 530 aa10.95□□□□□ -0.66
ATM-211ENST00000527389 MTFR1Q15390 333 aa10.95□□□□□ -0.66
ATM-211ENST00000527389 LARP1Q6PKG0 1096 aaKnown RBP10.95□□□□□ -0.66
ATM-211ENST00000527389 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.95□□□□□ -0.66
ATM-211ENST00000527389 BACH1O14867 736 aa10.94□□□□□ -0.66
ATM-211ENST00000527389 SMTNP53814 917 aa10.94□□□□□ -0.66
ATM-211ENST00000527389 TLR1Q15399 786 aa10.94□□□□□ -0.66
ATM-211ENST00000527389 SLC27A3Q5K4L6 730 aa10.94□□□□□ -0.66
ATM-211ENST00000527389 ZNF594Q96JF6 807 aaPredicted RBP10.94□□□□□ -0.66
ATM-211ENST00000527389 ZSCAN10Q96SZ4 725 aaPredicted RBP10.94□□□□□ -0.66
ATM-211ENST00000527389 PBXIP1Q96AQ6 731 aa10.93□□□□□ -0.66
ATM-211ENST00000527389 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.92□□□□□ -0.66
ATM-211ENST00000527389 EPHA4P54764 986 aa10.92□□□□□ -0.66
ATM-211ENST00000527389 WDR44Q5JSH3 913 aa10.92□□□□□ -0.66
ATM-211ENST00000527389 PRICKLE2Q7Z3G6 844 aa10.92□□□□□ -0.66
ATM-211ENST00000527389 SERTAD1Q9UHV2 236 aa10.92□□□□□ -0.66
ATM-211ENST00000527389 A6NJY4 79 aa10.91□□□□□ -0.66
ATM-211ENST00000527389 PTSQ03393 145 aa10.91□□□□□ -0.66
ATM-211ENST00000527389 PPARGC1BQ86YN6 1023 aaKnown RBP10.91□□□□□ -0.66
ATM-211ENST00000527389 ANKMY2Q8IV38 441 aa10.91□□□□□ -0.66
ATM-211ENST00000527389 ARXQ96QS3 562 aa10.91□□□□□ -0.66
ATM-211ENST00000527389 SLC35F4A4IF30 521 aa10.9□□□□□ -0.66
ATM-211ENST00000527389 SEC13P55735 322 aa10.9□□□□□ -0.66
ATM-211ENST00000527389 ELOAQ14241 798 aaKnown RBP10.9□□□□□ -0.66
ATM-211ENST00000527389 NPAS3Q8IXF0 933 aa10.9□□□□□ -0.66
ATM-211ENST00000527389 IQSEC3Q9UPP2 1182 aaPredicted RBP10.9□□□□□ -0.66
ATM-211ENST00000527389 SENP3-EIF4A1A0A087X0R7 540 aa10.89□□□□□ -0.67
ATM-211ENST00000527389 CDK2AP1O14519 115 aa10.89□□□□□ -0.67
ATM-211ENST00000527389 ATG7O95352 703 aa10.89□□□□□ -0.67
ATM-211ENST00000527389 DPYDQ12882 1025 aa10.89□□□□□ -0.67
ATM-211ENST00000527389 CDCA8Q53HL2 280 aa10.89□□□□□ -0.67
ATM-211ENST00000527389 NBPF10Q6P3W6 841 aaKnown RBP10.89□□□□□ -0.67
ATM-211ENST00000527389 TAS1R3Q7RTX0 852 aa10.89□□□□□ -0.67
ATM-211ENST00000527389 ZNF295-AS1Q8N0V1 137 aa10.89□□□□□ -0.67
ATM-211ENST00000527389 NBPF15Q8N660 670 aa10.89□□□□□ -0.67
ATM-211ENST00000527389 RHBDD1Q8TEB9 315 aa10.89□□□□□ -0.67
ATM-211ENST00000527389 SCHIP1Q9P0W5 487 aaPredicted RBP10.89□□□□□ -0.67
ATM-211ENST00000527389 NXF1Q9UBU9 619 aaKnown RBP10.89□□□□□ -0.67
ATM-211ENST00000527389 RBM19Q9Y4C8 960 aaKnown RBP10.89□□□□□ -0.67
ATM-211ENST00000527389 SFI1A8K8P3 1242 aa10.88□□□□□ -0.67
ATM-211ENST00000527389 GTF2E1P29083 439 aaPredicted RBP10.88□□□□□ -0.67
ATM-211ENST00000527389 FOXK2Q01167 660 aa10.88□□□□□ -0.67
ATM-211ENST00000527389 POU4F2Q12837 409 aa10.88□□□□□ -0.67
ATM-211ENST00000527389 PPP1R15AO75807 674 aaPredicted RBP10.87□□□□□ -0.67
ATM-211ENST00000527389 RHOQP17081 205 aa10.87□□□□□ -0.67
ATM-211ENST00000527389 GNASQ5JWF2 1037 aa10.87□□□□□ -0.67
ATM-211ENST00000527389 TMEM214Q6NUQ4 689 aaKnown RBP10.87□□□□□ -0.67
ATM-211ENST00000527389 C4orf17Q53FE4 359 aa10.86□□□□□ -0.67
ATM-211ENST00000527389 USP3Q9Y6I4 520 aa10.86□□□□□ -0.67
ATM-211ENST00000527389 TERTO14746 1132 aaKnown RBP10.85□□□□□ -0.67
ATM-211ENST00000527389 TNS4Q8IZW8 715 aa10.85□□□□□ -0.67
ATM-211ENST00000527389 CCDC155Q8N6L0 562 aa10.85□□□□□ -0.67
ATM-211ENST00000527389 TSEN2Q8NCE0 465 aaKnown RBP10.85□□□□□ -0.67
ATM-211ENST00000527389 ZNF775Q96BV0 537 aaPredicted RBP10.85□□□□□ -0.67
ATM-211ENST00000527389 ZMIZ1Q9ULJ6 1067 aa10.85□□□□□ -0.67
ATM-211ENST00000527389 NOVA2Q9UNW9 492 aaKnown RBP10.85□□□□□ -0.67
ATM-211ENST00000527389 DYRK1BQ9Y463 629 aa10.85□□□□□ -0.67
ATM-211ENST00000527389 PPFIA3O75145 1194 aa10.84□□□□□ -0.67
ATM-211ENST00000527389 NIFKQ9BYG3 293 aaKnown RBP10.84□□□□□ -0.67
ATM-211ENST00000527389 H3BM21 787 aa10.83□□□□□ -0.68
ATM-211ENST00000527389 SLC9A9Q8IVB4 645 aa10.83□□□□□ -0.68
ATM-211ENST00000527389 FAM200AQ8TCP9 573 aa10.83□□□□□ -0.68
ATM-211ENST00000527389 NFX1Q12986 1120 aaKnown RBP10.82□□□□□ -0.68
ATM-211ENST00000527389 TIMMDC1Q9NPL8 285 aa10.82□□□□□ -0.68
ATM-211ENST00000527389 A0A1B0GTH6 734 aa10.81□□□□□ -0.68
ATM-211ENST00000527389 POTEAQ6S8J7 498 aa10.81□□□□□ -0.68
ATM-211ENST00000527389 TSPAN10Q9H1Z9 355 aaPredicted RBP10.81□□□□□ -0.68
ATM-211ENST00000527389 PHKA2P46019 1235 aa10.8□□□□□ -0.68
ATM-211ENST00000527389 PLA2G4AP47712 749 aa10.8□□□□□ -0.68
ATM-211ENST00000527389 TEAD4Q15561 434 aa10.8□□□□□ -0.68
ATM-211ENST00000527389 STK32AQ8WU08 396 aa10.8□□□□□ -0.68
ATM-211ENST00000527389 ACIN1Q9UKV3 1341 aaKnown RBP10.8□□□□□ -0.68
ATM-211ENST00000527389 ITGA6P23229 1130 aa10.79□□□□□ -0.68
ATM-211ENST00000527389 PSMA6P60900 246 aaKnown RBP10.79□□□□□ -0.68
ATM-211ENST00000527389 SWI5Q1ZZU3 235 aa10.79□□□□□ -0.68
ATM-211ENST00000527389 GAS2L2Q8NHY3 880 aa10.79□□□□□ -0.68
ATM-211ENST00000527389 ZDHHC1Q8WTX9 485 aa10.79□□□□□ -0.68
ATM-211ENST00000527389 CABP1Q9NZU7 370 aa10.79□□□□□ -0.68
ATM-211ENST00000527389 C21orf2O43822 256 aa10.78□□□□□ -0.68
ATM-211ENST00000527389 VSIG8P0DPA2 414 aa10.78□□□□□ -0.68
ATM-211ENST00000527389 VEGFBP49765 207 aa10.78□□□□□ -0.68
ATM-211ENST00000527389 FAM69CQ0P6D2 419 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms