RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 SCN11AQ9UI33 1791 aa24.25■■□□□ 1.47
SMPD1-203ENST00000527275 A0A0G2JS52 829 aa24.25■■□□□ 1.47
SMPD1-203ENST00000527275 MYT1Q01538 1121 aa24.25■■□□□ 1.47
SMPD1-203ENST00000527275 ZNF772Q68DY9 489 aaPredicted RBP24.23■■□□□ 1.47
SMPD1-203ENST00000527275 TSPYL4Q9UJ04 414 aa24.23■■□□□ 1.47
SMPD1-203ENST00000527275 EXOSC9Q06265 439 aaKnown RBP24.22■■□□□ 1.47
SMPD1-203ENST00000527275 EXOC6Q8TAG9 804 aa24.22■■□□□ 1.47
SMPD1-203ENST00000527275 NFATC2IPQ8NCF5 419 aa24.22■■□□□ 1.47
SMPD1-203ENST00000527275 SLC52A2Q9HAB3 445 aa24.22■■□□□ 1.47
SMPD1-203ENST00000527275 ONECUT3O60422 494 aaPredicted RBP24.2■■□□□ 1.47
SMPD1-203ENST00000527275 CCDC136Q96JN2 1154 aa24.2■■□□□ 1.47
SMPD1-203ENST00000527275 MARCH10Q8NA82 808 aaPredicted RBP24.2■■□□□ 1.46
SMPD1-203ENST00000527275 BTBD11A6QL63 1104 aa24.19■■□□□ 1.46
SMPD1-203ENST00000527275 CABP4P57796 275 aa24.18■■□□□ 1.46
SMPD1-203ENST00000527275 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.18■■□□□ 1.46
SMPD1-203ENST00000527275 BABAM1Q9NWV8 329 aa24.18■■□□□ 1.46
SMPD1-203ENST00000527275 THSD7AQ9UPZ6 1657 aa24.18■■□□□ 1.46
SMPD1-203ENST00000527275 ERVV-2B6SEH9 535 aa24.18■■□□□ 1.46
SMPD1-203ENST00000527275 KAT6BQ8WYB5 2073 aa24.17■■□□□ 1.46
SMPD1-203ENST00000527275 KRT24Q2M2I5 525 aa24.17■■□□□ 1.46
SMPD1-203ENST00000527275 SIPA1L3O60292 1781 aaPredicted RBP24.17■■□□□ 1.46
SMPD1-203ENST00000527275 MRC1P22897 1456 aa24.17■■□□□ 1.46
SMPD1-203ENST00000527275 ELL2O00472 640 aaPredicted RBP24.16■■□□□ 1.46
SMPD1-203ENST00000527275 TSPYL6Q8N831 410 aa24.16■■□□□ 1.46
SMPD1-203ENST00000527275 RGS17Q9UGC6 210 aaPredicted RBP24.16■■□□□ 1.46
SMPD1-203ENST00000527275 SEPT12Q8IYM1 358 aa24.16■■□□□ 1.46
SMPD1-203ENST00000527275 C8orf58Q8NAV2 365 aa24.16■■□□□ 1.46
SMPD1-203ENST00000527275 ILDR1Q86SU0 546 aaPredicted RBP24.15■■□□□ 1.46
SMPD1-203ENST00000527275 TSHZ2Q9NRE2 1034 aa24.15■■□□□ 1.46
SMPD1-203ENST00000527275 KCNQ3O43525 872 aa24.15■■□□□ 1.46
SMPD1-203ENST00000527275 TOGARAM1Q9Y4F4 1720 aa24.14■■□□□ 1.46
SMPD1-203ENST00000527275 RBM6P78332 1123 aaKnown RBP24.13■■□□□ 1.45
SMPD1-203ENST00000527275 BCAR3O75815 825 aa24.13■■□□□ 1.45
SMPD1-203ENST00000527275 SLC39A6Q13433 755 aa24.13■■□□□ 1.45
SMPD1-203ENST00000527275 C20orf194Q5TEA3 1177 aa24.13■■□□□ 1.45
SMPD1-203ENST00000527275 CRBNQ96SW2 442 aa24.13■■□□□ 1.45
SMPD1-203ENST00000527275 TWISTNBQ3B726 338 aaPredicted RBP24.12■■□□□ 1.45
SMPD1-203ENST00000527275 KDM3BQ7LBC6 1761 aa24.12■■□□□ 1.45
SMPD1-203ENST00000527275 CT47B1P0C2W7 299 aaPredicted RBP24.11■■□□□ 1.45
SMPD1-203ENST00000527275 ZNF790Q6PG37 636 aa24.11■■□□□ 1.45
SMPD1-203ENST00000527275 TMOD3Q9NYL9 352 aa24.11■■□□□ 1.45
SMPD1-203ENST00000527275 VAMP4O75379 141 aa24.1■■□□□ 1.45
SMPD1-203ENST00000527275 EIF4A1P60842 406 aaKnown RBP24.1■■□□□ 1.45
SMPD1-203ENST00000527275 FAM182BQ5T319 152 aa24.1■■□□□ 1.45
SMPD1-203ENST00000527275 SYTL4Q96C24 671 aaPredicted RBP24.1■■□□□ 1.45
SMPD1-203ENST00000527275 EP400Q96L91 3159 aa24.1■■□□□ 1.45
SMPD1-203ENST00000527275 PRIM1P49642 420 aaKnown RBP24.09■■□□□ 1.45
SMPD1-203ENST00000527275 PIGBQ92521 554 aa24.09■■□□□ 1.45
SMPD1-203ENST00000527275 RARSP54136 660 aaKnown RBP24.08■■□□□ 1.45
SMPD1-203ENST00000527275 ACSBG1Q96GR2 724 aa24.08■■□□□ 1.45
SMPD1-203ENST00000527275 ITGB4P16144 1822 aa24.08■■□□□ 1.44
SMPD1-203ENST00000527275 RXRBP28702 533 aa24.08■■□□□ 1.44
SMPD1-203ENST00000527275 POTEAQ6S8J7 498 aa24.08■■□□□ 1.44
SMPD1-203ENST00000527275 BCL2L13Q9BXK5 485 aa24.07■■□□□ 1.44
SMPD1-203ENST00000527275 DOT1LQ8TEK3 1739 aa24.07■■□□□ 1.44
SMPD1-203ENST00000527275 TTC5Q8N0Z6 440 aa24.06■■□□□ 1.44
SMPD1-203ENST00000527275 BCL9O00512 1426 aa24.05■■□□□ 1.44
SMPD1-203ENST00000527275 ZNF496Q96IT1 587 aaPredicted RBP24.05■■□□□ 1.44
SMPD1-203ENST00000527275 SSH1Q8WYL5 1049 aa24.04■■□□□ 1.44
SMPD1-203ENST00000527275 KCNQ2O43526 872 aa24.03■■□□□ 1.44
SMPD1-203ENST00000527275 ZNF428Q96B54 188 aa24.03■■□□□ 1.44
SMPD1-203ENST00000527275 ASAP1Q9ULH1 1129 aa24.03■■□□□ 1.44
SMPD1-203ENST00000527275 HEG1Q9ULI3 1381 aa24.03■■□□□ 1.44
SMPD1-203ENST00000527275 TCERG1O14776 1098 aaKnown RBP24.02■■□□□ 1.44
SMPD1-203ENST00000527275 BRWD3Q6RI45 1802 aa24.02■■□□□ 1.44
SMPD1-203ENST00000527275 GIGYF1O75420 1035 aaPredicted RBP24.02■■□□□ 1.44
SMPD1-203ENST00000527275 KRT27Q7Z3Y8 459 aa24.02■■□□□ 1.44
SMPD1-203ENST00000527275 ATG3Q9NT62 314 aa24.01■■□□□ 1.43
SMPD1-203ENST00000527275 SMC4Q9NTJ3 1288 aa24.01■■□□□ 1.43
SMPD1-203ENST00000527275 PRAMEF22A3QJZ6 481 aa24.01■■□□□ 1.43
SMPD1-203ENST00000527275 PTCD1O75127 700 aaKnown RBP24■■□□□ 1.43
SMPD1-203ENST00000527275 ALDH1L2Q3SY69 923 aa24■■□□□ 1.43
SMPD1-203ENST00000527275 FMNL2Q96PY5 1086 aa24■■□□□ 1.43
SMPD1-203ENST00000527275 CANXP27824 592 aaKnown RBP23.99■■□□□ 1.43
SMPD1-203ENST00000527275 PDE3AQ14432 1141 aa23.99■■□□□ 1.43
SMPD1-203ENST00000527275 NECTIN2Q92692 538 aa23.99■■□□□ 1.43
SMPD1-203ENST00000527275 PAPPAQ13219 1627 aa23.99■■□□□ 1.43
SMPD1-203ENST00000527275 SOS1Q07889 1333 aaPredicted RBP23.98■■□□□ 1.43
SMPD1-203ENST00000527275 HOXB7P09629 217 aa23.98■■□□□ 1.43
SMPD1-203ENST00000527275 PTF1AQ7RTS3 328 aa23.98■■□□□ 1.43
SMPD1-203ENST00000527275 EIF2S2P20042 333 aaKnown RBP23.97■■□□□ 1.43
SMPD1-203ENST00000527275 FRAT1Q92837 279 aaPredicted RBP23.97■■□□□ 1.43
SMPD1-203ENST00000527275 RGS12O14924 1447 aa23.96■■□□□ 1.43
SMPD1-203ENST00000527275 UBR2Q8IWV8 1755 aa23.96■■□□□ 1.43
SMPD1-203ENST00000527275 KCPQ6ZWJ8 1503 aa23.96■■□□□ 1.43
SMPD1-203ENST00000527275 SNRPA1P09661 255 aaKnown RBP23.96■■□□□ 1.43
SMPD1-203ENST00000527275 HDGFL1Q5TGJ6 251 aa23.96■■□□□ 1.43
SMPD1-203ENST00000527275 CCDC30Q5VVM6 783 aa23.95■■□□□ 1.42
SMPD1-203ENST00000527275 MRPL50Q8N5N7 158 aaKnown RBP23.94■■□□□ 1.42
SMPD1-203ENST00000527275 FAM196AQ6ZSG2 479 aa23.93■■□□□ 1.42
SMPD1-203ENST00000527275 SLC4A2P04920 1241 aa23.93■■□□□ 1.42
SMPD1-203ENST00000527275 RBM42Q9BTD8 480 aaKnown RBP23.93■■□□□ 1.42
SMPD1-203ENST00000527275 USP16Q9Y5T5 823 aa23.93■■□□□ 1.42
SMPD1-203ENST00000527275 BRPF1P55201 1214 aaPredicted RBP23.92■■□□□ 1.42
SMPD1-203ENST00000527275 C5P01031 1676 aa23.92■■□□□ 1.42
SMPD1-203ENST00000527275 SBF2Q86WG5 1849 aa23.92■■□□□ 1.42
SMPD1-203ENST00000527275 STK31Q9BXU1 1019 aa23.92■■□□□ 1.42
SMPD1-203ENST00000527275 NOB1Q9ULX3 412 aaKnown RBP23.92■■□□□ 1.42
SMPD1-203ENST00000527275 PANK1Q8TE04 598 aa23.91■■□□□ 1.42
SMPD1-203ENST00000527275 SLC4A9Q96Q91 983 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms