RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 ATG3Q9NT62 314 aa18.17■□□□□ 0.5
CAPN1-207ENST00000527189 TUBGCP6Q96RT7 1819 aa18.16■□□□□ 0.5
CAPN1-207ENST00000527189 C1orf141Q5JVX7 400 aa18.16■□□□□ 0.5
CAPN1-207ENST00000527189 CC2D1BQ5T0F9 858 aaKnown RBP18.16■□□□□ 0.5
CAPN1-207ENST00000527189 AEBP1Q8IUX7 1158 aa18.16■□□□□ 0.5
CAPN1-207ENST00000527189 TAF1LQ8IZX4 1826 aa18.16■□□□□ 0.5
CAPN1-207ENST00000527189 ATP6V1AP38606 617 aa18.15■□□□□ 0.5
CAPN1-207ENST00000527189 SSFA2P28290 1259 aa18.14■□□□□ 0.49
CAPN1-207ENST00000527189 CABP4P57796 275 aa18.14■□□□□ 0.49
CAPN1-207ENST00000527189 C4BP0C0L5 1744 aa18.13■□□□□ 0.49
CAPN1-207ENST00000527189 DIAPH1O60610 1272 aaKnown RBP18.13■□□□□ 0.49
CAPN1-207ENST00000527189 AKAP4Q5JQC9 854 aa18.12■□□□□ 0.49
CAPN1-207ENST00000527189 LINC00116Q8NCU8 138 aa18.12■□□□□ 0.49
CAPN1-207ENST00000527189 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.11■□□□□ 0.49
CAPN1-207ENST00000527189 ITPK1Q13572 414 aa18.11■□□□□ 0.49
CAPN1-207ENST00000527189 KDM6AO15550 1401 aaPredicted RBP18.11■□□□□ 0.49
CAPN1-207ENST00000527189 RC3H1Q5TC82 1133 aaKnown RBP18.1■□□□□ 0.49
CAPN1-207ENST00000527189 NFATC2IPQ8NCF5 419 aa18.09■□□□□ 0.49
CAPN1-207ENST00000527189 RBM42Q9BTD8 480 aaKnown RBP18.09■□□□□ 0.49
CAPN1-207ENST00000527189 ZNF831Q5JPB2 1677 aa18.09■□□□□ 0.49
CAPN1-207ENST00000527189 GNPATO15228 680 aa18.08■□□□□ 0.48
CAPN1-207ENST00000527189 MSL1Q68DK7 614 aa18.08■□□□□ 0.48
CAPN1-207ENST00000527189 KLHL34Q8N239 644 aa18.08■□□□□ 0.48
CAPN1-207ENST00000527189 CD2APQ9Y5K6 639 aa18.08■□□□□ 0.48
CAPN1-207ENST00000527189 PHF14O94880 888 aa18.07■□□□□ 0.48
CAPN1-207ENST00000527189 HMOX1P09601 288 aa18.07■□□□□ 0.48
CAPN1-207ENST00000527189 GPR162Q16538 588 aa18.07■□□□□ 0.48
CAPN1-207ENST00000527189 AMIGO3Q86WK7 504 aa18.07■□□□□ 0.48
CAPN1-207ENST00000527189 SLC4A9Q96Q91 983 aa18.07■□□□□ 0.48
CAPN1-207ENST00000527189 UBR3Q6ZT12 1888 aa18.07■□□□□ 0.48
CAPN1-207ENST00000527189 ADRA2BP18089 450 aa18.06■□□□□ 0.48
CAPN1-207ENST00000527189 RTCBQ9Y3I0 505 aaKnown RBP18.06■□□□□ 0.48
CAPN1-207ENST00000527189 CNTNAP4Q9C0A0 1308 aa18.05■□□□□ 0.48
CAPN1-207ENST00000527189 TRAPPC3LQ5T215 181 aa18.05■□□□□ 0.48
CAPN1-207ENST00000527189 NLGN2Q8NFZ4 835 aa18.04■□□□□ 0.48
CAPN1-207ENST00000527189 SLC52A2Q9HAB3 445 aa18.04■□□□□ 0.48
CAPN1-207ENST00000527189 RNMTO43148 476 aaKnown RBP18.03■□□□□ 0.48
CAPN1-207ENST00000527189 RPS6KA4O75676 772 aa18.03■□□□□ 0.48
CAPN1-207ENST00000527189 MTHFSDQ2M296 383 aaKnown RBP18.03■□□□□ 0.48
CAPN1-207ENST00000527189 CFAP53Q96M91 514 aa18.03■□□□□ 0.48
CAPN1-207ENST00000527189 LGR6Q9HBX8 967 aa18.03■□□□□ 0.48
CAPN1-207ENST00000527189 GRIN3BO60391 1043 aa18.02■□□□□ 0.48
CAPN1-207ENST00000527189 PTCD1O75127 700 aaKnown RBP18.02■□□□□ 0.48
CAPN1-207ENST00000527189 SMIM5Q71RC9 77 aa18.02■□□□□ 0.48
CAPN1-207ENST00000527189 NLGN1Q8N2Q7 840 aa18.02■□□□□ 0.48
CAPN1-207ENST00000527189 SCN11AQ9UI33 1791 aa18.02■□□□□ 0.47
CAPN1-207ENST00000527189 COL3A1P02461 1466 aaPredicted RBP18.01■□□□□ 0.47
CAPN1-207ENST00000527189 U2SURPO15042 1029 aaKnown RBP18.01■□□□□ 0.47
CAPN1-207ENST00000527189 CNGB1Q14028 1251 aaPredicted RBP18.01■□□□□ 0.47
CAPN1-207ENST00000527189 ARHGEF1Q92888 912 aaKnown RBP18■□□□□ 0.47
CAPN1-207ENST00000527189 NUDCQ9Y266 331 aa18■□□□□ 0.47
CAPN1-207ENST00000527189 RFC4P35249 363 aa17.99■□□□□ 0.47
CAPN1-207ENST00000527189 GAS2L2Q8NHY3 880 aa17.99■□□□□ 0.47
CAPN1-207ENST00000527189 ATP10DQ9P241 1426 aa17.98■□□□□ 0.47
CAPN1-207ENST00000527189 COL5A3P25940 1745 aaPredicted RBP17.98■□□□□ 0.47
CAPN1-207ENST00000527189 HSPA6P17066 643 aa17.98■□□□□ 0.47
CAPN1-207ENST00000527189 CRKLP46109 303 aaKnown RBP17.98■□□□□ 0.47
CAPN1-207ENST00000527189 PELP1Q8IZL8 1130 aaKnown RBP17.98■□□□□ 0.47
CAPN1-207ENST00000527189 MRC1P22897 1456 aa17.98■□□□□ 0.47
CAPN1-207ENST00000527189 PPP2R1AP30153 589 aa17.97■□□□□ 0.47
CAPN1-207ENST00000527189 VSIG10Q8N0Z9 540 aa17.97■□□□□ 0.47
CAPN1-207ENST00000527189 PCNTO95613 3336 aa17.97■□□□□ 0.47
CAPN1-207ENST00000527189 GNAT3A8MTJ3 354 aa17.96■□□□□ 0.47
CAPN1-207ENST00000527189 MMP10P09238 476 aa17.96■□□□□ 0.47
CAPN1-207ENST00000527189 CICQ96RK0 1608 aaPredicted RBP17.96■□□□□ 0.47
CAPN1-207ENST00000527189 ADAMTS7Q9UKP4 1686 aa17.96■□□□□ 0.47
CAPN1-207ENST00000527189 GYS1P13807 737 aa17.95■□□□□ 0.46
CAPN1-207ENST00000527189 YBX3P16989 372 aaKnown RBP eCLIP17.95■□□□□ 0.463e-6■□□□□ 8.1
CAPN1-207ENST00000527189 MYH14Q7Z406 1995 aaKnown RBP17.94■□□□□ 0.46
CAPN1-207ENST00000527189 SLC39A6Q13433 755 aa17.94■□□□□ 0.46
CAPN1-207ENST00000527189 INTS5Q6P9B9 1019 aaKnown RBP17.94■□□□□ 0.46
CAPN1-207ENST00000527189 FCHSD2O94868 740 aa17.93■□□□□ 0.46
CAPN1-207ENST00000527189 TGFB2P61812 414 aa17.93■□□□□ 0.46
CAPN1-207ENST00000527189 TEFQ10587 303 aa17.93■□□□□ 0.46
CAPN1-207ENST00000527189 DNAJC10Q8IXB1 793 aa17.93■□□□□ 0.46
CAPN1-207ENST00000527189 IL17REQ8NFR9 667 aa17.93■□□□□ 0.46
CAPN1-207ENST00000527189 RSPH6AQ9H0K4 717 aa17.93■□□□□ 0.46
CAPN1-207ENST00000527189 CCDC87Q9NVE4 849 aa17.93■□□□□ 0.46
CAPN1-207ENST00000527189 CYP19A1P11511 503 aaPredicted RBP17.92■□□□□ 0.46
CAPN1-207ENST00000527189 PRKAR2BP31323 418 aa17.92■□□□□ 0.46
CAPN1-207ENST00000527189 TTC5Q8N0Z6 440 aa17.92■□□□□ 0.46
CAPN1-207ENST00000527189 U2AF1L5P0DN76 240 aaPredicted RBP17.91■□□□□ 0.46
CAPN1-207ENST00000527189 U2AF1Q01081 240 aaKnown RBP eCLIP17.91■□□□□ 0.46
CAPN1-207ENST00000527189 PHACTR3Q96KR7 559 aa17.91■□□□□ 0.46
CAPN1-207ENST00000527189 PARP3Q9Y6F1 533 aa17.91■□□□□ 0.46
CAPN1-207ENST00000527189 TJP1Q07157 1748 aa17.91■□□□□ 0.46
CAPN1-207ENST00000527189 USP42Q9H9J4 1324 aaKnown RBP17.91■□□□□ 0.46
CAPN1-207ENST00000527189 ADCY9O60503 1353 aa17.91■□□□□ 0.46
CAPN1-207ENST00000527189 ZNF790Q6PG37 636 aa17.9■□□□□ 0.46
CAPN1-207ENST00000527189 TEX13AQ9BXU3 409 aaPredicted RBP17.9■□□□□ 0.46
CAPN1-207ENST00000527189 CEMIPQ8WUJ3 1361 aa17.9■□□□□ 0.46
CAPN1-207ENST00000527189 VIRMAQ69YN4 1812 aaKnown RBP17.89■□□□□ 0.45
CAPN1-207ENST00000527189 KCPQ6ZWJ8 1503 aa17.89■□□□□ 0.45
CAPN1-207ENST00000527189 STARD3NLO95772 234 aa17.89■□□□□ 0.45
CAPN1-207ENST00000527189 SOS1Q07889 1333 aaPredicted RBP17.89■□□□□ 0.45
CAPN1-207ENST00000527189 ZPR1O75312 459 aa17.88■□□□□ 0.45
CAPN1-207ENST00000527189 HTATSF1O43719 755 aaKnown RBP17.87■□□□□ 0.45
CAPN1-207ENST00000527189 FKBP8Q14318 412 aa17.87■□□□□ 0.45
CAPN1-207ENST00000527189 GPBP1L1Q9HC44 474 aaPredicted RBP17.87■□□□□ 0.45
CAPN1-207ENST00000527189 SRP68Q9UHB9 627 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms