RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 RTN4Q9NQC3 1192 aaKnown RBP13.3□□□□□ -0.28
PTPMT1-204ENST00000527079 APBB1O00213 710 aa13.29□□□□□ -0.28
PTPMT1-204ENST00000527079 PDE1AP54750 535 aa13.29□□□□□ -0.28
PTPMT1-204ENST00000527079 ATP8B2P98198 1209 aa13.29□□□□□ -0.28
PTPMT1-204ENST00000527079 CLEC17AQ6ZS10 378 aa13.29□□□□□ -0.28
PTPMT1-204ENST00000527079 CHMP4AQ9BY43 222 aa13.29□□□□□ -0.28
PTPMT1-204ENST00000527079 PHF8Q9UPP1 1060 aa13.29□□□□□ -0.28
PTPMT1-204ENST00000527079 ERC2O15083 957 aa13.29□□□□□ -0.28
PTPMT1-204ENST00000527079 NUTM2GQ5VZR2 741 aa13.29□□□□□ -0.28
PTPMT1-204ENST00000527079 FAM43AQ8N2R8 423 aa13.28□□□□□ -0.28
PTPMT1-204ENST00000527079 IP6K1Q92551 441 aa13.28□□□□□ -0.28
PTPMT1-204ENST00000527079 LRRCC1Q9C099 1032 aa13.28□□□□□ -0.28
PTPMT1-204ENST00000527079 SALL3Q9BXA9 1300 aa13.28□□□□□ -0.28
PTPMT1-204ENST00000527079 TUBGCP6Q96RT7 1819 aa13.28□□□□□ -0.28
PTPMT1-204ENST00000527079 GZF1Q9H116 711 aaPredicted RBP13.28□□□□□ -0.28
PTPMT1-204ENST00000527079 CEMIPQ8WUJ3 1361 aa13.27□□□□□ -0.28
PTPMT1-204ENST00000527079 ST18O60284 1047 aa13.27□□□□□ -0.28
PTPMT1-204ENST00000527079 PHRF1Q9P1Y6 1649 aaKnown RBP13.27□□□□□ -0.28
PTPMT1-204ENST00000527079 NFAT5O94916 1531 aa13.27□□□□□ -0.29
PTPMT1-204ENST00000527079 IBTKQ9P2D0 1353 aaPredicted RBP13.27□□□□□ -0.29
PTPMT1-204ENST00000527079 XRCC6P12956 609 aaKnown RBP eCLIP13.27□□□□□ -0.29
PTPMT1-204ENST00000527079 MRE11P49959 708 aa13.27□□□□□ -0.29
PTPMT1-204ENST00000527079 ANKLE2Q86XL3 938 aa13.27□□□□□ -0.29
PTPMT1-204ENST00000527079 LTV1Q96GA3 475 aaPredicted RBP13.27□□□□□ -0.29
PTPMT1-204ENST00000527079 SRCIN1Q9C0H9 1055 aa13.27□□□□□ -0.29
PTPMT1-204ENST00000527079 MED1Q15648 1581 aaPredicted RBP13.26□□□□□ -0.29
PTPMT1-204ENST00000527079 GOLGA6L22H0YM25 854 aa13.26□□□□□ -0.29
PTPMT1-204ENST00000527079 HOXB7P09629 217 aa13.26□□□□□ -0.29
PTPMT1-204ENST00000527079 KCNH5Q8NCM2 988 aa13.26□□□□□ -0.29
PTPMT1-204ENST00000527079 CWC22Q9HCG8 908 aaKnown RBP13.26□□□□□ -0.29
PTPMT1-204ENST00000527079 EXOC6BQ9Y2D4 811 aa13.26□□□□□ -0.29
PTPMT1-204ENST00000527079 NUCB2P80303 420 aa13.25□□□□□ -0.29
PTPMT1-204ENST00000527079 HDGFL1Q5TGJ6 251 aa13.25□□□□□ -0.29
PTPMT1-204ENST00000527079 C14orf37Q86TY3 774 aa13.25□□□□□ -0.29
PTPMT1-204ENST00000527079 ZNF142P52746 1687 aaPredicted RBP13.25□□□□□ -0.29
PTPMT1-204ENST00000527079 FOXD4L1Q9NU39 408 aa13.25□□□□□ -0.29
PTPMT1-204ENST00000527079 STAP2Q9UGK3 403 aa13.25□□□□□ -0.29
PTPMT1-204ENST00000527079 ADGRL3Q9HAR2 1447 aa13.25□□□□□ -0.29
PTPMT1-204ENST00000527079 AOX1Q06278 1338 aa13.25□□□□□ -0.29
PTPMT1-204ENST00000527079 PNMA6EA0A0J9YXQ4 647 aa13.24□□□□□ -0.29
PTPMT1-204ENST00000527079 MX1P20591 662 aa13.24□□□□□ -0.29
PTPMT1-204ENST00000527079 USP44Q9H0E7 712 aa13.24□□□□□ -0.29
PTPMT1-204ENST00000527079 KDM3BQ7LBC6 1761 aa13.24□□□□□ -0.29
PTPMT1-204ENST00000527079 UBTFL1P0CB47 393 aaPredicted RBP13.24□□□□□ -0.29
PTPMT1-204ENST00000527079 LRRFIP2Q9Y608 721 aaKnown RBP13.24□□□□□ -0.29
PTPMT1-204ENST00000527079 LMO7Q8WWI1 1683 aa13.23□□□□□ -0.29
PTPMT1-204ENST00000527079 SSFA2P28290 1259 aa13.23□□□□□ -0.29
PTPMT1-204ENST00000527079 NECTIN2Q92692 538 aa13.23□□□□□ -0.29
PTPMT1-204ENST00000527079 USHBP1Q8N6Y0 703 aa13.23□□□□□ -0.29
PTPMT1-204ENST00000527079 SSH3Q8TE77 659 aa13.23□□□□□ -0.29
PTPMT1-204ENST00000527079 RAB11FIP3O75154 756 aa13.22□□□□□ -0.29
PTPMT1-204ENST00000527079 EIF4A1P60842 406 aaKnown RBP13.22□□□□□ -0.29
PTPMT1-204ENST00000527079 PSME1Q06323 249 aa13.22□□□□□ -0.29
PTPMT1-204ENST00000527079 NBPF6Q5VWK0 638 aa13.22□□□□□ -0.29
PTPMT1-204ENST00000527079 NBPF4Q96M43 638 aa13.22□□□□□ -0.29
PTPMT1-204ENST00000527079 ESYT1Q9BSJ8 1104 aa13.22□□□□□ -0.29
PTPMT1-204ENST00000527079 EPB41L2O43491 1005 aaKnown RBP13.22□□□□□ -0.29
PTPMT1-204ENST00000527079 BAG4O95429 457 aaKnown RBP13.22□□□□□ -0.29
PTPMT1-204ENST00000527079 CYP2E1P05181 493 aaPredicted RBP13.22□□□□□ -0.29
PTPMT1-204ENST00000527079 MCM2P49736 904 aa13.22□□□□□ -0.29
PTPMT1-204ENST00000527079 MCCP23508 829 aa13.21□□□□□ -0.29
PTPMT1-204ENST00000527079 ANAPC15P60006 121 aa13.21□□□□□ -0.29
PTPMT1-204ENST00000527079 AKAP4Q5JQC9 854 aa13.21□□□□□ -0.29
PTPMT1-204ENST00000527079 GRPEL1Q9HAV7 217 aa13.21□□□□□ -0.29
PTPMT1-204ENST00000527079 SETD1BQ9UPS6 1966 aaKnown RBP13.21□□□□□ -0.29
PTPMT1-204ENST00000527079 AK9Q5TCS8 1911 aa13.21□□□□□ -0.3
PTPMT1-204ENST00000527079 AMOTQ4VCS5 1084 aa13.2□□□□□ -0.3
PTPMT1-204ENST00000527079 PHAXQ9H814 394 aaKnown RBP13.2□□□□□ -0.3
PTPMT1-204ENST00000527079 OVOS2A0A0G2JMS6 1433 aa13.2□□□□□ -0.3
PTPMT1-204ENST00000527079 CHMLP26374 656 aa13.2□□□□□ -0.3
PTPMT1-204ENST00000527079 POLA2Q14181 598 aa13.2□□□□□ -0.3
PTPMT1-204ENST00000527079 KLHL40Q2TBA0 621 aa13.2□□□□□ -0.3
PTPMT1-204ENST00000527079 PLEKHO1Q53GL0 409 aaPredicted RBP13.2□□□□□ -0.3
PTPMT1-204ENST00000527079 ESCO1Q5FWF5 840 aa13.2□□□□□ -0.3
PTPMT1-204ENST00000527079 IL17RAQ96F46 866 aa13.2□□□□□ -0.3
PTPMT1-204ENST00000527079 NCAPD2Q15021 1401 aa13.2□□□□□ -0.3
PTPMT1-204ENST00000527079 RGPD2P0DJD1 1756 aa13.19□□□□□ -0.3
PTPMT1-204ENST00000527079 TRIM6-TRIM34B2RNG4 842 aa13.19□□□□□ -0.3
PTPMT1-204ENST00000527079 TEFQ10587 303 aa13.19□□□□□ -0.3
PTPMT1-204ENST00000527079 LGR6Q9HBX8 967 aa13.19□□□□□ -0.3
PTPMT1-204ENST00000527079 DNAAF4Q8WXU2 420 aa13.18□□□□□ -0.3
PTPMT1-204ENST00000527079 ARXQ96QS3 562 aa13.18□□□□□ -0.3
PTPMT1-204ENST00000527079 SLIT3O75094 1523 aa13.18□□□□□ -0.3
PTPMT1-204ENST00000527079 BTBD11A6QL63 1104 aa13.18□□□□□ -0.3
PTPMT1-204ENST00000527079 EIF2S2P20042 333 aaKnown RBP13.18□□□□□ -0.3
PTPMT1-204ENST00000527079 HSP90AB4PQ58FF6 505 aa13.18□□□□□ -0.3
PTPMT1-204ENST00000527079 TSHZ3Q63HK5 1081 aa13.18□□□□□ -0.3
PTPMT1-204ENST00000527079 ZNF530Q6P9A1 599 aaPredicted RBP13.18□□□□□ -0.3
PTPMT1-204ENST00000527079 PPP1R42Q7Z4L9 355 aa13.18□□□□□ -0.3
PTPMT1-204ENST00000527079 RILPL2Q969X0 211 aa13.18□□□□□ -0.3
PTPMT1-204ENST00000527079 PANK2Q9BZ23 570 aa13.18□□□□□ -0.3
PTPMT1-204ENST00000527079 BEND3Q5T5X7 828 aa13.17□□□□□ -0.3
PTPMT1-204ENST00000527079 KIF1BPQ96EK5 621 aa13.17□□□□□ -0.3
PTPMT1-204ENST00000527079 CHPF2Q9P2E5 772 aa13.17□□□□□ -0.3
PTPMT1-204ENST00000527079 SURF6O75683 361 aaKnown RBP13.16□□□□□ -0.3
PTPMT1-204ENST00000527079 NEK4P51957 841 aa13.16□□□□□ -0.3
PTPMT1-204ENST00000527079 ARHGEF25Q86VW2 580 aa13.16□□□□□ -0.3
PTPMT1-204ENST00000527079 DDX49Q9Y6V7 483 aaKnown RBP13.16□□□□□ -0.3
PTPMT1-204ENST00000527079 LMTK3Q96Q04 1460 aa13.16□□□□□ -0.3
PTPMT1-204ENST00000527079 GCP02774 474 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms