RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 WDR7Q9Y4E6 1490 aa9.15□□□□□ -0.95
ATPAF1-208ENST00000526821 ZNF644Q9H582 1327 aaPredicted RBP9.14□□□□□ -0.95
ATPAF1-208ENST00000526821 PREX2Q70Z35 1606 aa9.14□□□□□ -0.95
ATPAF1-208ENST00000526821 BMP2P12643 396 aa9.14□□□□□ -0.95
ATPAF1-208ENST00000526821 ITGAEP38570 1179 aa9.14□□□□□ -0.95
ATPAF1-208ENST00000526821 NR1H3Q13133 447 aa9.14□□□□□ -0.95
ATPAF1-208ENST00000526821 INTS6LQ5JSJ4 861 aaKnown RBP9.14□□□□□ -0.95
ATPAF1-208ENST00000526821 SEPT12Q8IYM1 358 aa9.14□□□□□ -0.95
ATPAF1-208ENST00000526821 OCSTAMPQ9BR26 566 aa9.14□□□□□ -0.95
ATPAF1-208ENST00000526821 TSEN34Q9BSV6 310 aaKnown RBP9.14□□□□□ -0.95
ATPAF1-208ENST00000526821 SNRKQ9NRH2 765 aa9.14□□□□□ -0.95
ATPAF1-208ENST00000526821 CAMSAP2Q08AD1 1489 aa9.14□□□□□ -0.95
ATPAF1-208ENST00000526821 HFM1A2PYH4 1435 aa9.14□□□□□ -0.95
ATPAF1-208ENST00000526821 ABCC5O15440 1437 aa9.14□□□□□ -0.95
ATPAF1-208ENST00000526821 AKNAQ7Z591 1439 aa9.14□□□□□ -0.95
ATPAF1-208ENST00000526821 SETD5Q9C0A6 1442 aa9.14□□□□□ -0.95
ATPAF1-208ENST00000526821 DNMT1P26358 1616 aaKnown RBP9.13□□□□□ -0.95
ATPAF1-208ENST00000526821 RAB15P59190 212 aa9.13□□□□□ -0.95
ATPAF1-208ENST00000526821 LINC00528Q8N1L1 170 aa9.13□□□□□ -0.95
ATPAF1-208ENST00000526821 MEIOBQ8N635 442 aa9.13□□□□□ -0.95
ATPAF1-208ENST00000526821 DAPK1P53355 1430 aa9.13□□□□□ -0.95
ATPAF1-208ENST00000526821 ASXL2Q76L83 1435 aa9.13□□□□□ -0.95
ATPAF1-208ENST00000526821 ARAP3Q8WWN8 1544 aa9.12□□□□□ -0.95
ATPAF1-208ENST00000526821 CDC42BPBQ9Y5S2 1711 aa9.12□□□□□ -0.95
ATPAF1-208ENST00000526821 FBXO45P0C2W1 286 aa9.12□□□□□ -0.95
ATPAF1-208ENST00000526821 C6orf118Q5T5N4 469 aa9.12□□□□□ -0.95
ATPAF1-208ENST00000526821 RNF20Q5VTR2 975 aa9.12□□□□□ -0.95
ATPAF1-208ENST00000526821 PLCH2O75038 1416 aa9.12□□□□□ -0.95
ATPAF1-208ENST00000526821 ROCK1Q13464 1354 aa9.12□□□□□ -0.95
ATPAF1-208ENST00000526821 RAB3GAP2Q9H2M9 1393 aa9.12□□□□□ -0.95
ATPAF1-208ENST00000526821 ABCA9Q8IUA7 1624 aa9.11□□□□□ -0.95
ATPAF1-208ENST00000526821 NAIPQ13075 1403 aa9.11□□□□□ -0.95
ATPAF1-208ENST00000526821 MBD5Q9P267 1494 aa9.1□□□□□ -0.95
ATPAF1-208ENST00000526821 ZEB1P37275 1124 aaPredicted RBP9.1□□□□□ -0.95
ATPAF1-208ENST00000526821 CCER1Q8TC90 406 aaPredicted RBP9.1□□□□□ -0.95
ATPAF1-208ENST00000526821 SLC16A10Q8TF71 515 aa9.1□□□□□ -0.95
ATPAF1-208ENST00000526821 ARHGEF5Q12774 1597 aa9.1□□□□□ -0.95
ATPAF1-208ENST00000526821 SAMD9LQ8IVG5 1584 aa9.1□□□□□ -0.95
ATPAF1-208ENST00000526821 MYO5CQ9NQX4 1742 aa9.1□□□□□ -0.95
ATPAF1-208ENST00000526821 DHX57Q6P158 1386 aaKnown RBP9.1□□□□□ -0.95
ATPAF1-208ENST00000526821 KIAA1107Q9UPP5 1409 aa9.09□□□□□ -0.95
ATPAF1-208ENST00000526821 MAN1A2O60476 641 aa9.09□□□□□ -0.95
ATPAF1-208ENST00000526821 MAPKBP1O60336 1514 aa9.09□□□□□ -0.95
ATPAF1-208ENST00000526821 ADGRL2O95490 1459 aa9.08□□□□□ -0.96
ATPAF1-208ENST00000526821 SHANK2Q9UPX8 1470 aa9.08□□□□□ -0.96
ATPAF1-208ENST00000526821 CROCC2H7BZ55 1655 aa9.08□□□□□ -0.96
ATPAF1-208ENST00000526821 ESPNB1AK53 854 aa9.08□□□□□ -0.96
ATPAF1-208ENST00000526821 CYB5RLQ6IPT4 315 aa9.08□□□□□ -0.96
ATPAF1-208ENST00000526821 TREML4Q6UXN2 200 aa9.08□□□□□ -0.96
ATPAF1-208ENST00000526821 Q6ZVU0 165 aa9.08□□□□□ -0.96
ATPAF1-208ENST00000526821 ESF1Q9H501 851 aaKnown RBP9.08□□□□□ -0.96
ATPAF1-208ENST00000526821 ARHGAP5Q13017 1502 aa9.08□□□□□ -0.96
ATPAF1-208ENST00000526821 PLEKHH2Q8IVE3 1493 aa9.08□□□□□ -0.96
ATPAF1-208ENST00000526821 GCC2Q8IWJ2 1684 aa9.07□□□□□ -0.96
ATPAF1-208ENST00000526821 WFS1O76024 890 aa9.07□□□□□ -0.96
ATPAF1-208ENST00000526821 ZNF777Q9ULD5 760 aaPredicted RBP9.07□□□□□ -0.96
ATPAF1-208ENST00000526821 CLSPNQ9HAW4 1339 aa9.06□□□□□ -0.96
ATPAF1-208ENST00000526821 NCOA1Q15788 1441 aa9.06□□□□□ -0.96
ATPAF1-208ENST00000526821 ERVH48-1M5A8F1 160 aa9.06□□□□□ -0.96
ATPAF1-208ENST00000526821 TERTO14746 1132 aaKnown RBP9.06□□□□□ -0.96
ATPAF1-208ENST00000526821 EIF4G2P78344 907 aaKnown RBP eCLIP9.06□□□□□ -0.96
ATPAF1-208ENST00000526821 CBLBQ13191 982 aa9.06□□□□□ -0.96
ATPAF1-208ENST00000526821 EFCAB2Q5VUJ9 269 aa9.06□□□□□ -0.96
ATPAF1-208ENST00000526821 WWC1Q8IX03 1113 aa9.06□□□□□ -0.96
ATPAF1-208ENST00000526821 NPAS3Q8IXF0 933 aa9.06□□□□□ -0.96
ATPAF1-208ENST00000526821 NXF1Q9UBU9 619 aaKnown RBP9.06□□□□□ -0.96
ATPAF1-208ENST00000526821 ARHGEF12Q9NZN5 1544 aa9.05□□□□□ -0.96
ATPAF1-208ENST00000526821 CCDC141Q6ZP82 1450 aa9.05□□□□□ -0.96
ATPAF1-208ENST00000526821 ZNF784Q8NCA9 323 aaPredicted RBP9.05□□□□□ -0.96
ATPAF1-208ENST00000526821 CHIC2Q9UKJ5 165 aa9.05□□□□□ -0.96
ATPAF1-208ENST00000526821 TBC1D2BQ9UPU7 963 aa9.05□□□□□ -0.96
ATPAF1-208ENST00000526821 ABCC1P33527 1531 aa9.05□□□□□ -0.96
ATPAF1-208ENST00000526821 SYCP2Q9BX26 1530 aa9.05□□□□□ -0.96
ATPAF1-208ENST00000526821 ADGBQ8N7X0 1667 aa9.04□□□□□ -0.96
ATPAF1-208ENST00000526821 MAST1Q9Y2H9 1570 aa9.04□□□□□ -0.96
ATPAF1-208ENST00000526821 GIGYF1O75420 1035 aaPredicted RBP9.04□□□□□ -0.96
ATPAF1-208ENST00000526821 HNRNPMP52272 730 aaKnown RBP eCLIP9.04□□□□□ -0.96
ATPAF1-208ENST00000526821 TMPRSS4Q9NRS4 437 aa9.04□□□□□ -0.96
ATPAF1-208ENST00000526821 RRP7BPQ9NSQ0 103 aa9.04□□□□□ -0.96
ATPAF1-208ENST00000526821 C9orf84Q5VXU9 1444 aa9.04□□□□□ -0.96
ATPAF1-208ENST00000526821 GLI2P10070 1586 aa9.03□□□□□ -0.96
ATPAF1-208ENST00000526821 ANKRD30AQ9BXX3 1397 aa9.03□□□□□ -0.96
ATPAF1-208ENST00000526821 KDM6BO15054 1643 aa9.03□□□□□ -0.96
ATPAF1-208ENST00000526821 TTLL8A6PVC2 850 aa9.03□□□□□ -0.96
ATPAF1-208ENST00000526821 ADH1AP07327 375 aa9.03□□□□□ -0.96
ATPAF1-208ENST00000526821 RELBQ01201 579 aa9.03□□□□□ -0.96
ATPAF1-208ENST00000526821 WASHC4Q2M389 1173 aa9.03□□□□□ -0.96
ATPAF1-208ENST00000526821 ACIN1Q9UKV3 1341 aaKnown RBP9.03□□□□□ -0.96
ATPAF1-208ENST00000526821 FANCAO15360 1455 aa9.02□□□□□ -0.96
ATPAF1-208ENST00000526821 SPINT1O43278 529 aa9.02□□□□□ -0.97
ATPAF1-208ENST00000526821 ABL2P42684 1182 aa9.02□□□□□ -0.97
ATPAF1-208ENST00000526821 MCM6Q14566 821 aa9.02□□□□□ -0.97
ATPAF1-208ENST00000526821 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.02□□□□□ -0.97
ATPAF1-208ENST00000526821 CYLDQ9NQC7 956 aa9.02□□□□□ -0.97
ATPAF1-208ENST00000526821 SOS2Q07890 1332 aaPredicted RBP9.02□□□□□ -0.97
ATPAF1-208ENST00000526821 TSPY4P0CV99 314 aa9.01□□□□□ -0.97
ATPAF1-208ENST00000526821 TSPY10P0CW01 314 aa9.01□□□□□ -0.97
ATPAF1-208ENST00000526821 FLIIQ13045 1269 aa9.01□□□□□ -0.97
ATPAF1-208ENST00000526821 TMEM132AQ24JP5 1023 aa9.01□□□□□ -0.97
ATPAF1-208ENST00000526821 CD109Q6YHK3 1445 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms