RNA–Protein interactions for RNA: ENST00000526369.3

PPFIA1-208, Transcript of PTPRF interacting protein alpha 1, human

TSL 4

Gene PPFIA1, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-208	ENST00000526369	GRIN3B	O60391	1043 aa		13.58	□□□□□ -0.24
PPFIA1-208	ENST00000526369	CCDC27	Q2M243	656 aa		13.58	□□□□□ -0.24
PPFIA1-208	ENST00000526369	MPRIP	Q6WCQ1	1025 aa		13.58	□□□□□ -0.24
PPFIA1-208	ENST00000526369	GOLGB1	Q14789	3259 aa	Known RBP	13.58	□□□□□ -0.24
PPFIA1-208	ENST00000526369	ZNF521	Q96K83	1311 aa		13.58	□□□□□ -0.24
PPFIA1-208	ENST00000526369		E9PSI1	815 aa		13.57	□□□□□ -0.24
PPFIA1-208	ENST00000526369	TAT	P17735	454 aa	Predicted RBP	13.57	□□□□□ -0.24
PPFIA1-208	ENST00000526369	PRKAR2B	P31323	418 aa		13.57	□□□□□ -0.24
PPFIA1-208	ENST00000526369	LMOD3	Q0VAK6	560 aa		13.57	□□□□□ -0.24
PPFIA1-208	ENST00000526369	EIF4A2	Q14240	407 aa	Known RBP	13.57	□□□□□ -0.24
PPFIA1-208	ENST00000526369	RSPH6A	Q9H0K4	717 aa		13.57	□□□□□ -0.24
PPFIA1-208	ENST00000526369	WWC3	Q9ULE0	1092 aa		13.57	□□□□□ -0.24
PPFIA1-208	ENST00000526369	FAM208A	Q9UK61	1670 aa	Known RBP	13.56	□□□□□ -0.24
PPFIA1-208	ENST00000526369	HMOX1	P09601	288 aa		13.55	□□□□□ -0.24
PPFIA1-208	ENST00000526369	NEUROD2	Q15784	382 aa		13.55	□□□□□ -0.24
PPFIA1-208	ENST00000526369	HSP90AB2P	Q58FF8	381 aa		13.55	□□□□□ -0.24
PPFIA1-208	ENST00000526369	SMIM5	Q71RC9	77 aa		13.55	□□□□□ -0.24
PPFIA1-208	ENST00000526369	ZNF526	Q8TF50	670 aa	Predicted RBP	13.55	□□□□□ -0.24
PPFIA1-208	ENST00000526369	PHF14	O94880	888 aa		13.54	□□□□□ -0.24
PPFIA1-208	ENST00000526369	CALD1	Q05682	793 aa	Known RBP	13.54	□□□□□ -0.24
PPFIA1-208	ENST00000526369	PLEKHF1	Q96S99	279 aa		13.54	□□□□□ -0.24
PPFIA1-208	ENST00000526369	RRP7A	Q9Y3A4	280 aa	Known RBP	13.54	□□□□□ -0.24
PPFIA1-208	ENST00000526369	CHD4	Q14839	1912 aa		13.53	□□□□□ -0.24
PPFIA1-208	ENST00000526369	TMPO	P42166	694 aa	Known RBP	13.53	□□□□□ -0.24
PPFIA1-208	ENST00000526369	WDR63	Q8IWG1	891 aa		13.53	□□□□□ -0.24
PPFIA1-208	ENST00000526369	WWC1	Q8IX03	1113 aa		13.53	□□□□□ -0.24
PPFIA1-208	ENST00000526369	AK7	Q96M32	723 aa		13.53	□□□□□ -0.24
PPFIA1-208	ENST00000526369	MYH16	Q9H6N6	1097 aa		13.53	□□□□□ -0.24
PPFIA1-208	ENST00000526369	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.53	□□□□□ -0.24
PPFIA1-208	ENST00000526369	IGSF1	Q8N6C5	1336 aa		13.53	□□□□□ -0.24
PPFIA1-208	ENST00000526369	PALLD	Q8WX93	1383 aa		13.53	□□□□□ -0.24
PPFIA1-208	ENST00000526369	DOT1L	Q8TEK3	1739 aa		13.53	□□□□□ -0.24
PPFIA1-208	ENST00000526369	NFE2L2	Q16236	605 aa		13.52	□□□□□ -0.25
PPFIA1-208	ENST00000526369	SULT6B1	Q6IMI4	303 aa		13.52	□□□□□ -0.25
PPFIA1-208	ENST00000526369	FLAD1	Q8NFF5	587 aa		13.52	□□□□□ -0.25
PPFIA1-208	ENST00000526369	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.52	□□□□□ -0.25
PPFIA1-208	ENST00000526369	RCAN3	Q9UKA8	241 aa		13.52	□□□□□ -0.25
PPFIA1-208	ENST00000526369	CD2AP	Q9Y5K6	639 aa		13.52	□□□□□ -0.25
PPFIA1-208	ENST00000526369	PCDH11X	Q9BZA7	1347 aa		13.52	□□□□□ -0.25
PPFIA1-208	ENST00000526369	PCDH11Y	Q9BZA8	1340 aa		13.52	□□□□□ -0.25
PPFIA1-208	ENST00000526369	KDR	P35968	1356 aa		13.52	□□□□□ -0.25
PPFIA1-208	ENST00000526369	ATP10D	Q9P241	1426 aa		13.52	□□□□□ -0.25
PPFIA1-208	ENST00000526369	CYP27B1	O15528	508 aa		13.51	□□□□□ -0.25
PPFIA1-208	ENST00000526369	CDCA7L	Q96GN5	454 aa		13.51	□□□□□ -0.25
PPFIA1-208	ENST00000526369	IL16	Q14005	1332 aa		13.5	□□□□□ -0.25
PPFIA1-208	ENST00000526369	RIPK4	P57078	832 aa		13.5	□□□□□ -0.25
PPFIA1-208	ENST00000526369	SLFN5	Q08AF3	891 aa		13.5	□□□□□ -0.25
PPFIA1-208	ENST00000526369	FKBP8	Q14318	412 aa		13.5	□□□□□ -0.25
PPFIA1-208	ENST00000526369	AMIGO3	Q86WK7	504 aa		13.5	□□□□□ -0.25
PPFIA1-208	ENST00000526369	DLG5	Q8TDM6	1919 aa		13.49	□□□□□ -0.25
PPFIA1-208	ENST00000526369	TUBGCP6	Q96RT7	1819 aa		13.49	□□□□□ -0.25
PPFIA1-208	ENST00000526369	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.49	□□□□□ -0.25
PPFIA1-208	ENST00000526369	DUSP27	Q5VZP5	1158 aa		13.49	□□□□□ -0.25
PPFIA1-208	ENST00000526369	PIGB	Q92521	554 aa		13.49	□□□□□ -0.25
PPFIA1-208	ENST00000526369	SMARCC1	Q92922	1105 aa	Predicted RBP	13.49	□□□□□ -0.25
PPFIA1-208	ENST00000526369	SHANK3	Q9BYB0	1731 aa		13.49	□□□□□ -0.25
PPFIA1-208	ENST00000526369	QSER1	Q2KHR3	1735 aa		13.48	□□□□□ -0.25
PPFIA1-208	ENST00000526369	HMGB2	P26583	209 aa	Known RBP	13.48	□□□□□ -0.25
PPFIA1-208	ENST00000526369	IFFO2	Q5TF58	517 aa		13.48	□□□□□ -0.25
PPFIA1-208	ENST00000526369	ERICH6B	Q5W0A0	696 aa		13.48	□□□□□ -0.25
PPFIA1-208	ENST00000526369	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.48	□□□□□ -0.25
PPFIA1-208	ENST00000526369	GAS2L2	Q8NHY3	880 aa		13.48	□□□□□ -0.25
PPFIA1-208	ENST00000526369	RGPD2	P0DJD1	1756 aa		13.48	□□□□□ -0.25
PPFIA1-208	ENST00000526369	LY75	O60449	1722 aa		13.47	□□□□□ -0.25
PPFIA1-208	ENST00000526369	AEBP1	Q8IUX7	1158 aa		13.47	□□□□□ -0.25
PPFIA1-208	ENST00000526369	LINC00116	Q8NCU8	138 aa		13.47	□□□□□ -0.25
PPFIA1-208	ENST00000526369	CEP350	Q5VT06	3117 aa		13.47	□□□□□ -0.25
PPFIA1-208	ENST00000526369	RRP1	P56182	461 aa	Known RBP	13.46	□□□□□ -0.25
PPFIA1-208	ENST00000526369	EYA1	Q99502	592 aa		13.46	□□□□□ -0.25
PPFIA1-208	ENST00000526369	SPG7	Q9UQ90	795 aa		13.46	□□□□□ -0.25
PPFIA1-208	ENST00000526369	COL24A1	Q17RW2	1714 aa		13.45	□□□□□ -0.26
PPFIA1-208	ENST00000526369	LOC102724428	A0A0B4J2F2	783 aa		13.45	□□□□□ -0.26
PPFIA1-208	ENST00000526369	GNPAT	O15228	680 aa		13.45	□□□□□ -0.26
PPFIA1-208	ENST00000526369	CT47B1	P0C2W7	299 aa	Predicted RBP	13.45	□□□□□ -0.26
PPFIA1-208	ENST00000526369	SIK1	P57059	783 aa		13.45	□□□□□ -0.26
PPFIA1-208	ENST00000526369	TMOD3	Q9NYL9	352 aa		13.45	□□□□□ -0.26
PPFIA1-208	ENST00000526369	NCAPD2	Q15021	1401 aa		13.45	□□□□□ -0.26
PPFIA1-208	ENST00000526369	PLEKHG2	Q9H7P9	1386 aa		13.45	□□□□□ -0.26
PPFIA1-208	ENST00000526369	RNF123	Q5XPI4	1314 aa		13.44	□□□□□ -0.26
PPFIA1-208	ENST00000526369	FANCI	Q9NVI1	1328 aa		13.44	□□□□□ -0.26
PPFIA1-208	ENST00000526369	ATP6V1A	P38606	617 aa		13.44	□□□□□ -0.26
PPFIA1-208	ENST00000526369	TRMT2A	Q8IZ69	625 aa	Known RBP	13.44	□□□□□ -0.26
PPFIA1-208	ENST00000526369	RTF1	Q92541	710 aa	Known RBP	13.44	□□□□□ -0.26
PPFIA1-208	ENST00000526369	ASAP1	Q9ULH1	1129 aa		13.44	□□□□□ -0.26
PPFIA1-208	ENST00000526369	TRIM35	Q9UPQ4	493 aa		13.44	□□□□□ -0.26
PPFIA1-208	ENST00000526369	HSPA6	P17066	643 aa		13.43	□□□□□ -0.26
PPFIA1-208	ENST00000526369	SSFA2	P28290	1259 aa		13.43	□□□□□ -0.26
PPFIA1-208	ENST00000526369	ITPK1	Q13572	414 aa		13.43	□□□□□ -0.26
PPFIA1-208	ENST00000526369	PHACTR3	Q96KR7	559 aa		13.43	□□□□□ -0.26
PPFIA1-208	ENST00000526369	GNAI1	P63096	354 aa		13.42	□□□□□ -0.26
PPFIA1-208	ENST00000526369	NKX1-1	Q15270	411 aa	Predicted RBP	13.42	□□□□□ -0.26
PPFIA1-208	ENST00000526369	IFT57	Q9NWB7	429 aa		13.42	□□□□□ -0.26
PPFIA1-208	ENST00000526369	C5	P01031	1676 aa		13.42	□□□□□ -0.26
PPFIA1-208	ENST00000526369	MMP10	P09238	476 aa		13.41	□□□□□ -0.26
PPFIA1-208	ENST00000526369	CANX	P27824	592 aa	Known RBP	13.41	□□□□□ -0.26
PPFIA1-208	ENST00000526369	IRX6	P78412	446 aa	Predicted RBP	13.41	□□□□□ -0.26
PPFIA1-208	ENST00000526369	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.41	□□□□□ -0.26
PPFIA1-208	ENST00000526369	ADCY9	O60503	1353 aa		13.41	□□□□□ -0.26
PPFIA1-208	ENST00000526369	C4B	P0C0L5	1744 aa		13.4	□□□□□ -0.26
PPFIA1-208	ENST00000526369	PHKG2	P15735	406 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms