RNA–Protein interactions for RNA: ENST00000525852.3

CTTN-210, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,470 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-210ENST00000525852 ZNF827Q17R98 1081 aa16.35■□□□□ 0.21
CTTN-210ENST00000525852 SLC27A3Q5K4L6 730 aa16.35■□□□□ 0.21
CTTN-210ENST00000525852 NBPF14Q5TI25 921 aa16.35■□□□□ 0.21
CTTN-210ENST00000525852 IL17REQ8NFR9 667 aa16.35■□□□□ 0.21
CTTN-210ENST00000525852 TUBGCP6Q96RT7 1819 aa16.35■□□□□ 0.21
CTTN-210ENST00000525852 SIPA1L3O60292 1781 aaPredicted RBP16.35■□□□□ 0.21
CTTN-210ENST00000525852 SMARCC1Q92922 1105 aaPredicted RBP16.35■□□□□ 0.21
CTTN-210ENST00000525852 PNNQ9H307 717 aaKnown RBP16.35■□□□□ 0.21
CTTN-210ENST00000525852 SLC52A2Q9HAB3 445 aa16.35■□□□□ 0.21
CTTN-210ENST00000525852 CCDC146Q8IYE0 955 aa16.34■□□□□ 0.21
CTTN-210ENST00000525852 PDGFDQ9GZP0 370 aaPredicted RBP16.34■□□□□ 0.21
CTTN-210ENST00000525852 NEFMP07197 916 aa16.33■□□□□ 0.2
CTTN-210ENST00000525852 SLC4A9Q96Q91 983 aa16.33■□□□□ 0.2
CTTN-210ENST00000525852 MAPK8IP3Q9UPT6 1336 aa16.33■□□□□ 0.2
CTTN-210ENST00000525852 CASZ1Q86V15 1759 aa16.32■□□□□ 0.2
CTTN-210ENST00000525852 LOC102724428A0A0B4J2F2 783 aa16.32■□□□□ 0.2
CTTN-210ENST00000525852 SIK1P57059 783 aa16.32■□□□□ 0.2
CTTN-210ENST00000525852 NFE2L2Q16236 605 aa16.32■□□□□ 0.2
CTTN-210ENST00000525852 SLC15A2Q16348 729 aa16.32■□□□□ 0.2
CTTN-210ENST00000525852 AKT1S1Q96B36 256 aa16.32■□□□□ 0.2
CTTN-210ENST00000525852 MRS2Q9HD23 443 aa16.32■□□□□ 0.2
CTTN-210ENST00000525852 STK32BQ9NY57 414 aa16.32■□□□□ 0.2
CTTN-210ENST00000525852 CEMIPQ8WUJ3 1361 aa16.32■□□□□ 0.2
CTTN-210ENST00000525852 ITPK1Q13572 414 aa16.31■□□□□ 0.2
CTTN-210ENST00000525852 DCTN1Q14203 1278 aa16.31■□□□□ 0.2
CTTN-210ENST00000525852 MCM10Q7L590 875 aa16.31■□□□□ 0.2
CTTN-210ENST00000525852 C4BP0C0L5 1744 aa16.31■□□□□ 0.2
CTTN-210ENST00000525852 SLC39A6Q13433 755 aa16.3■□□□□ 0.2
CTTN-210ENST00000525852 HTATSF1O43719 755 aaKnown RBP16.29■□□□□ 0.2
CTTN-210ENST00000525852 PNISRQ8TF01 805 aaKnown RBP16.29■□□□□ 0.2
CTTN-210ENST00000525852 RTF1Q92541 710 aaKnown RBP16.29■□□□□ 0.2
CTTN-210ENST00000525852 RUNDC1Q96C34 613 aa16.29■□□□□ 0.2
CTTN-210ENST00000525852 UBR2Q8IWV8 1755 aa16.29■□□□□ 0.2
CTTN-210ENST00000525852 COL5A3P25940 1745 aaPredicted RBP16.29■□□□□ 0.2
CTTN-210ENST00000525852 QSER1Q2KHR3 1735 aa16.29■□□□□ 0.2
CTTN-210ENST00000525852 ZNF831Q5JPB2 1677 aa16.29■□□□□ 0.2
CTTN-210ENST00000525852 KCPQ6ZWJ8 1503 aa16.29■□□□□ 0.2
CTTN-210ENST00000525852 TJP1Q07157 1748 aa16.29■□□□□ 0.2
CTTN-210ENST00000525852 PTCD1O75127 700 aaKnown RBP16.29■□□□□ 0.2
CTTN-210ENST00000525852 ATP6V1AP38606 617 aa16.29■□□□□ 0.2
CTTN-210ENST00000525852 TEFQ10587 303 aa16.29■□□□□ 0.2
CTTN-210ENST00000525852 LINC00116Q8NCU8 138 aa16.29■□□□□ 0.2
CTTN-210ENST00000525852 RBM42Q9BTD8 480 aaKnown RBP16.29■□□□□ 0.2
CTTN-210ENST00000525852 TMPOP42166 694 aaKnown RBP16.28■□□□□ 0.2
CTTN-210ENST00000525852 RRP7AQ9Y3A4 280 aaKnown RBP16.28■□□□□ 0.2
CTTN-210ENST00000525852 UBR3Q6ZT12 1888 aa16.27■□□□□ 0.2
CTTN-210ENST00000525852 RIPK4P57078 832 aa16.27■□□□□ 0.19
CTTN-210ENST00000525852 AMIGO3Q86WK7 504 aa16.27■□□□□ 0.19
CTTN-210ENST00000525852 THUMPD2Q9BTF0 503 aaKnown RBP16.27■□□□□ 0.19
CTTN-210ENST00000525852 MYH14Q7Z406 1995 aaKnown RBP16.27■□□□□ 0.19
CTTN-210ENST00000525852 PNPLA7Q6ZV29 1317 aa16.26■□□□□ 0.19
CTTN-210ENST00000525852 SMIM5Q71RC9 77 aa16.26■□□□□ 0.19
CTTN-210ENST00000525852 CICQ96RK0 1608 aaPredicted RBP16.26■□□□□ 0.19
CTTN-210ENST00000525852 KCNQ3O43525 872 aa16.25■□□□□ 0.19
CTTN-210ENST00000525852 NEUROD2Q15784 382 aa16.25■□□□□ 0.19
CTTN-210ENST00000525852 TFCP2L1Q9NZI6 479 aa16.25■□□□□ 0.19
CTTN-210ENST00000525852 LRP5O75197 1615 aa16.24■□□□□ 0.19
CTTN-210ENST00000525852 BTBD11A6QL63 1104 aa16.23■□□□□ 0.19
CTTN-210ENST00000525852 APAF1O14727 1248 aa16.23■□□□□ 0.19
CTTN-210ENST00000525852 ZBTB7AO95365 584 aa16.23■□□□□ 0.19
CTTN-210ENST00000525852 DIEXFQ68CQ4 756 aaKnown RBP16.23■□□□□ 0.19
CTTN-210ENST00000525852 ZNF790Q6PG37 636 aa16.22■□□□□ 0.19
CTTN-210ENST00000525852 ZNF496Q96IT1 587 aaPredicted RBP16.22■□□□□ 0.19
CTTN-210ENST00000525852 TRIM35Q9UPQ4 493 aa16.22■□□□□ 0.19
CTTN-210ENST00000525852 TAF7Q15545 349 aaPredicted RBP16.22■□□□□ 0.19
CTTN-210ENST00000525852 COL23A1Q86Y22 540 aaPredicted RBP16.22■□□□□ 0.19
CTTN-210ENST00000525852 DNAJC10Q8IXB1 793 aa16.22■□□□□ 0.19
CTTN-210ENST00000525852 TTC5Q8N0Z6 440 aa16.22■□□□□ 0.19
CTTN-210ENST00000525852 AK7Q96M32 723 aa16.22■□□□□ 0.19
CTTN-210ENST00000525852 MIS18AQ9NYP9 233 aa16.22■□□□□ 0.19
CTTN-210ENST00000525852 KDM3BQ7LBC6 1761 aa16.21■□□□□ 0.19
CTTN-210ENST00000525852 SENP3-EIF4A1A0A087X0R7 540 aa16.21■□□□□ 0.19
CTTN-210ENST00000525852 GNPATO15228 680 aa16.2■□□□□ 0.18
CTTN-210ENST00000525852 PHF14O94880 888 aa16.2■□□□□ 0.18
CTTN-210ENST00000525852 LMOD3Q0VAK6 560 aa16.2■□□□□ 0.18
CTTN-210ENST00000525852 FAM9BQ8IZU0 186 aa16.2■□□□□ 0.18
CTTN-210ENST00000525852 CNTNAP4Q9C0A0 1308 aa16.19■□□□□ 0.18
CTTN-210ENST00000525852 HMGB2P26583 209 aaKnown RBP16.19■□□□□ 0.18
CTTN-210ENST00000525852 ATF5Q9Y2D1 282 aaPredicted RBP16.19■□□□□ 0.18
CTTN-210ENST00000525852 HEG1Q9ULI3 1381 aa16.18■□□□□ 0.18
CTTN-210ENST00000525852 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.18■□□□□ 0.18
CTTN-210ENST00000525852 CRKLP46109 303 aaKnown RBP16.18■□□□□ 0.18
CTTN-210ENST00000525852 VSIG10Q8N0Z9 540 aa16.18■□□□□ 0.18
CTTN-210ENST00000525852 FMNL2Q96PY5 1086 aa16.17■□□□□ 0.18
CTTN-210ENST00000525852 C4AP0C0L4 1744 aa16.17■□□□□ 0.18
CTTN-210ENST00000525852 COL24A1Q17RW2 1714 aa16.17■□□□□ 0.18
CTTN-210ENST00000525852 PRAMEF22A3QJZ6 481 aa16.16■□□□□ 0.18
CTTN-210ENST00000525852 CCER2I3L3R5 266 aa16.16■□□□□ 0.18
CTTN-210ENST00000525852 MSH5O43196 834 aa16.16■□□□□ 0.18
CTTN-210ENST00000525852 CYP19A1P11511 503 aaPredicted RBP16.16■□□□□ 0.18
CTTN-210ENST00000525852 PTGER2P43116 358 aa16.16■□□□□ 0.18
CTTN-210ENST00000525852 RC3H1Q5TC82 1133 aaKnown RBP16.16■□□□□ 0.18
CTTN-210ENST00000525852 INTS5Q6P9B9 1019 aaKnown RBP16.16■□□□□ 0.18
CTTN-210ENST00000525852 MIER1Q8N108 512 aa16.16■□□□□ 0.18
CTTN-210ENST00000525852 MTFR1LQ9H019 292 aa16.16■□□□□ 0.18
CTTN-210ENST00000525852 SPON1Q9HCB6 807 aa16.16■□□□□ 0.18
CTTN-210ENST00000525852 SSFA2P28290 1259 aa16.16■□□□□ 0.18
CTTN-210ENST00000525852 MSL1Q68DK7 614 aa16.15■□□□□ 0.18
CTTN-210ENST00000525852 SGIP1Q9BQI5 828 aa16.15■□□□□ 0.18
CTTN-210ENST00000525852 RPS6KA4O75676 772 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms