RNA–Protein interactions for RNA: ENST00000525733.5

CTSF-203, Transcript of cathepsin F, humanhuman

TSL 3

Gene CTSF, Length 609 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-203ENST00000525733 RGPD2P0DJD1 1756 aa12.25□□□□□ -0.45
CTSF-203ENST00000525733 BRPF1P55201 1214 aaPredicted RBP12.25□□□□□ -0.45
CTSF-203ENST00000525733 ZKSCAN2Q63HK3 967 aa12.25□□□□□ -0.45
CTSF-203ENST00000525733 CCDC125Q86Z20 511 aa12.25□□□□□ -0.45
CTSF-203ENST00000525733 TSPYL6Q8N831 410 aa12.25□□□□□ -0.45
CTSF-203ENST00000525733 CDCA7Q9BWT1 371 aaPredicted RBP12.25□□□□□ -0.45
CTSF-203ENST00000525733 USP35Q9P2H5 1018 aa12.25□□□□□ -0.45
CTSF-203ENST00000525733 SOS1Q07889 1333 aaPredicted RBP12.25□□□□□ -0.45
CTSF-203ENST00000525733 COL14A1Q05707 1796 aaKnown RBP12.25□□□□□ -0.45
CTSF-203ENST00000525733 BTBD11A6QL63 1104 aa12.24□□□□□ -0.45
CTSF-203ENST00000525733 BCL2L13Q9BXK5 485 aa12.24□□□□□ -0.45
CTSF-203ENST00000525733 PCDH11XQ9BZA7 1347 aa12.24□□□□□ -0.45
CTSF-203ENST00000525733 PCDH11YQ9BZA8 1340 aa12.24□□□□□ -0.45
CTSF-203ENST00000525733 THRAP3Q9Y2W1 955 aaKnown RBP12.24□□□□□ -0.45
CTSF-203ENST00000525733 MEGF6O75095 1541 aa12.23□□□□□ -0.45
CTSF-203ENST00000525733 OVOS2A0A0G2JMS6 1433 aa12.23□□□□□ -0.45
CTSF-203ENST00000525733 CYP27B1O15528 508 aa12.23□□□□□ -0.45
CTSF-203ENST00000525733 CCDC9Q9Y3X0 531 aaKnown RBP12.23□□□□□ -0.45
CTSF-203ENST00000525733 KIF16BQ96L93 1317 aa12.22□□□□□ -0.45
CTSF-203ENST00000525733 EXOC5O00471 708 aa12.22□□□□□ -0.45
CTSF-203ENST00000525733 NKX1-1Q15270 411 aaPredicted RBP12.22□□□□□ -0.45
CTSF-203ENST00000525733 DEFB132Q7Z7B7 95 aa12.22□□□□□ -0.45
CTSF-203ENST00000525733 MRPL50Q8N5N7 158 aaKnown RBP12.22□□□□□ -0.45
CTSF-203ENST00000525733 EXOC6Q8TAG9 804 aa12.22□□□□□ -0.45
CTSF-203ENST00000525733 DDX54Q8TDD1 881 aaKnown RBP12.22□□□□□ -0.45
CTSF-203ENST00000525733 ARHGAP45Q92619 1136 aa12.22□□□□□ -0.45
CTSF-203ENST00000525733 CRBNQ96SW2 442 aa12.22□□□□□ -0.45
CTSF-203ENST00000525733 NOB1Q9ULX3 412 aaKnown RBP12.22□□□□□ -0.45
CTSF-203ENST00000525733 NRAPQ86VF7 1730 aa12.22□□□□□ -0.45
CTSF-203ENST00000525733 LRP5O75197 1615 aa12.22□□□□□ -0.45
CTSF-203ENST00000525733 ERVV-2B6SEH9 535 aa12.21□□□□□ -0.45
CTSF-203ENST00000525733 CABP4P57796 275 aa12.21□□□□□ -0.45
CTSF-203ENST00000525733 C20orf194Q5TEA3 1177 aa12.21□□□□□ -0.45
CTSF-203ENST00000525733 CCDC30Q5VVM6 783 aa12.21□□□□□ -0.45
CTSF-203ENST00000525733 SEPT12Q8IYM1 358 aa12.21□□□□□ -0.45
CTSF-203ENST00000525733 SLC52A2Q9HAB3 445 aa12.21□□□□□ -0.45
CTSF-203ENST00000525733 SPATA31A1Q5TZJ5 1347 aa12.2□□□□□ -0.46
CTSF-203ENST00000525733 HOXB7P09629 217 aa12.2□□□□□ -0.46
CTSF-203ENST00000525733 EIF4A1P60842 406 aaKnown RBP12.2□□□□□ -0.46
CTSF-203ENST00000525733 AAMPQ13685 434 aa12.2□□□□□ -0.46
CTSF-203ENST00000525733 ATF7IPQ6VMQ6 1270 aa12.2□□□□□ -0.46
CTSF-203ENST00000525733 FTSJ3Q8IY81 847 aaKnown RBP12.2□□□□□ -0.46
CTSF-203ENST00000525733 DZIP1LQ8IYY4 767 aaKnown RBP12.2□□□□□ -0.46
CTSF-203ENST00000525733 NFATC2IPQ8NCF5 419 aa12.2□□□□□ -0.46
CTSF-203ENST00000525733 STK31Q9BXU1 1019 aa12.2□□□□□ -0.46
CTSF-203ENST00000525733 SPATA31A5Q5VU36 1347 aa12.19□□□□□ -0.46
CTSF-203ENST00000525733 SPATA31A7Q8IWB4 1347 aa12.19□□□□□ -0.46
CTSF-203ENST00000525733 A0A0G2JS52 829 aa12.19□□□□□ -0.46
CTSF-203ENST00000525733 MYT1Q01538 1121 aa12.19□□□□□ -0.46
CTSF-203ENST00000525733 SF3B2Q13435 895 aaKnown RBP12.19□□□□□ -0.46
CTSF-203ENST00000525733 VPS72Q15906 364 aa12.19□□□□□ -0.46
CTSF-203ENST00000525733 KRT24Q2M2I5 525 aa12.19□□□□□ -0.46
CTSF-203ENST00000525733 CCDC136Q96JN2 1154 aa12.19□□□□□ -0.46
CTSF-203ENST00000525733 API5Q9BZZ5 524 aaKnown RBP12.19□□□□□ -0.46
CTSF-203ENST00000525733 TCERG1O14776 1098 aaKnown RBP12.18□□□□□ -0.46
CTSF-203ENST00000525733 SLC4A2P04920 1241 aa12.18□□□□□ -0.46
CTSF-203ENST00000525733 BARGINQ6ZT62 677 aa12.18□□□□□ -0.46
CTSF-203ENST00000525733 PELP1Q8IZL8 1130 aaKnown RBP12.18□□□□□ -0.46
CTSF-203ENST00000525733 TTC5Q8N0Z6 440 aa12.18□□□□□ -0.46
CTSF-203ENST00000525733 PANK1Q8TE04 598 aa12.18□□□□□ -0.46
CTSF-203ENST00000525733 CHMP4BQ9H444 224 aaKnown RBP12.18□□□□□ -0.46
CTSF-203ENST00000525733 KCNQ3O43525 872 aa12.17□□□□□ -0.46
CTSF-203ENST00000525733 ZNF790Q6PG37 636 aa12.17□□□□□ -0.46
CTSF-203ENST00000525733 KRT27Q7Z3Y8 459 aa12.17□□□□□ -0.46
CTSF-203ENST00000525733 CLUAP1Q96AJ1 413 aa12.17□□□□□ -0.46
CTSF-203ENST00000525733 TRIM27P14373 513 aa12.16□□□□□ -0.46
CTSF-203ENST00000525733 DDB1Q16531 1140 aa12.16□□□□□ -0.46
CTSF-203ENST00000525733 HDGFL1Q5TGJ6 251 aa12.16□□□□□ -0.46
CTSF-203ENST00000525733 B4GALNT3Q6L9W6 998 aa12.16□□□□□ -0.46
CTSF-203ENST00000525733 COG6Q9Y2V7 657 aa12.16□□□□□ -0.46
CTSF-203ENST00000525733 KDM6AO15550 1401 aaPredicted RBP12.16□□□□□ -0.46
CTSF-203ENST00000525733 LRRC37A3O60309 1634 aa12.15□□□□□ -0.46
CTSF-203ENST00000525733 PTPRCP08575 1304 aa12.15□□□□□ -0.46
CTSF-203ENST00000525733 PARP4Q9UKK3 1724 aaKnown RBP12.15□□□□□ -0.46
CTSF-203ENST00000525733 DISP2A7MBM2 1401 aa12.15□□□□□ -0.46
CTSF-203ENST00000525733 PSDA5PKW4 1024 aaPredicted RBP12.15□□□□□ -0.46
CTSF-203ENST00000525733 GIGYF1O75420 1035 aaPredicted RBP12.15□□□□□ -0.46
CTSF-203ENST00000525733 EIF2S2P20042 333 aaKnown RBP12.15□□□□□ -0.46
CTSF-203ENST00000525733 MVPQ14764 893 aaKnown RBP12.15□□□□□ -0.46
CTSF-203ENST00000525733 FAM98CQ17RN3 349 aaKnown RBP12.15□□□□□ -0.46
CTSF-203ENST00000525733 DDX19BQ9UMR2 479 aa12.15□□□□□ -0.46
CTSF-203ENST00000525733 PKD1L3Q7Z443 1732 aa12.14□□□□□ -0.47
CTSF-203ENST00000525733 SLC39A6Q13433 755 aa12.14□□□□□ -0.47
CTSF-203ENST00000525733 FMNL2Q96PY5 1086 aa12.14□□□□□ -0.47
CTSF-203ENST00000525733 TMOD3Q9NYL9 352 aa12.14□□□□□ -0.47
CTSF-203ENST00000525733 ONECUT3O60422 494 aaPredicted RBP12.13□□□□□ -0.47
CTSF-203ENST00000525733 SNRPA1P09661 255 aaKnown RBP12.13□□□□□ -0.47
CTSF-203ENST00000525733 RLBP1P12271 317 aa12.13□□□□□ -0.47
CTSF-203ENST00000525733 ITPRIPQ8IWB1 547 aa12.13□□□□□ -0.47
CTSF-203ENST00000525733 NECTIN2Q92692 538 aa12.13□□□□□ -0.47
CTSF-203ENST00000525733 TNNQ9UQP3 1299 aa12.13□□□□□ -0.47
CTSF-203ENST00000525733 TNS1Q9HBL0 1735 aaKnown RBP12.13□□□□□ -0.47
CTSF-203ENST00000525733 FAM182BQ5T319 152 aa12.12□□□□□ -0.47
CTSF-203ENST00000525733 TMEM57Q8N5G2 664 aa12.12□□□□□ -0.47
CTSF-203ENST00000525733 DBF4Q9UBU7 674 aaPredicted RBP12.12□□□□□ -0.47
CTSF-203ENST00000525733 HEG1Q9ULI3 1381 aa12.12□□□□□ -0.47
CTSF-203ENST00000525733 ADAMTS7Q9UKP4 1686 aa12.12□□□□□ -0.47
CTSF-203ENST00000525733 BAG6P46379 1132 aa12.11□□□□□ -0.47
CTSF-203ENST00000525733 ZNF496Q96IT1 587 aaPredicted RBP12.11□□□□□ -0.47
CTSF-203ENST00000525733 THSD7AQ9UPZ6 1657 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms