RNA–Protein interactions for RNA: ENST00000525599.1

CCDC17-208, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 1,403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-208ENST00000525599 SIPA1L3O60292 1781 aaPredicted RBP29.04■■■□□ 2.24
CCDC17-208ENST00000525599 NFATC2IPQ8NCF5 419 aa29.03■■■□□ 2.24
CCDC17-208ENST00000525599 SMARCC1Q92922 1105 aaPredicted RBP29.03■■■□□ 2.24
CCDC17-208ENST00000525599 RRP7AQ9Y3A4 280 aaKnown RBP29.03■■■□□ 2.24
CCDC17-208ENST00000525599 MCM10Q7L590 875 aa29.03■■■□□ 2.24
CCDC17-208ENST00000525599 NGEFQ8N5V2 710 aa29.03■■■□□ 2.24
CCDC17-208ENST00000525599 NEUROD2Q15784 382 aa29.01■■■□□ 2.23
CCDC17-208ENST00000525599 CCDC27Q2M243 656 aa29■■■□□ 2.23
CCDC17-208ENST00000525599 TRIM35Q9UPQ4 493 aa29■■■□□ 2.23
CCDC17-208ENST00000525599 DCTN1Q14203 1278 aa28.99■■■□□ 2.23
CCDC17-208ENST00000525599 CAMKK2Q96RR4 588 aa28.98■■■□□ 2.23
CCDC17-208ENST00000525599 PAPPAQ13219 1627 aa28.98■■■□□ 2.23
CCDC17-208ENST00000525599 LY75O60449 1722 aa28.98■■■□□ 2.23
CCDC17-208ENST00000525599 PALLDQ8WX93 1383 aa28.97■■■□□ 2.23
CCDC17-208ENST00000525599 DEFB132Q7Z7B7 95 aa28.96■■■□□ 2.23
CCDC17-208ENST00000525599 ATG3Q9NT62 314 aa28.96■■■□□ 2.23
CCDC17-208ENST00000525599 EN1Q05925 392 aaPredicted RBP28.95■■■□□ 2.23
CCDC17-208ENST00000525599 ASAP1Q9ULH1 1129 aa28.95■■■□□ 2.23
CCDC17-208ENST00000525599 CALD1Q05682 793 aaKnown RBP28.94■■■□□ 2.22
CCDC17-208ENST00000525599 TAF7Q15545 349 aaPredicted RBP28.94■■■□□ 2.22
CCDC17-208ENST00000525599 HMGB2P26583 209 aaKnown RBP28.94■■■□□ 2.22
CCDC17-208ENST00000525599 SLC27A3Q5K4L6 730 aa28.94■■■□□ 2.22
CCDC17-208ENST00000525599 BABAM1Q9NWV8 329 aa28.94■■■□□ 2.22
CCDC17-208ENST00000525599 RREB1Q92766 1687 aa28.93■■■□□ 2.22
CCDC17-208ENST00000525599 THUMPD2Q9BTF0 503 aaKnown RBP28.93■■■□□ 2.22
CCDC17-208ENST00000525599 ZNF831Q5JPB2 1677 aa28.93■■■□□ 2.22
CCDC17-208ENST00000525599 BTBD11A6QL63 1104 aa28.91■■■□□ 2.22
CCDC17-208ENST00000525599 EZH2Q15910 746 aaKnown RBP28.91■■■□□ 2.22
CCDC17-208ENST00000525599 TXNRD1Q16881 649 aa28.91■■■□□ 2.22
CCDC17-208ENST00000525599 UBR2Q8IWV8 1755 aa28.91■■■□□ 2.22
CCDC17-208ENST00000525599 ZNF790Q6PG37 636 aa28.89■■■□□ 2.22
CCDC17-208ENST00000525599 TTC5Q8N0Z6 440 aa28.89■■■□□ 2.22
CCDC17-208ENST00000525599 WWC1Q8IX03 1113 aa28.88■■■□□ 2.21
CCDC17-208ENST00000525599 PROM2Q8N271 834 aa28.88■■■□□ 2.21
CCDC17-208ENST00000525599 LOC102724428A0A0B4J2F2 783 aa28.87■■■□□ 2.21
CCDC17-208ENST00000525599 SIK1P57059 783 aa28.87■■■□□ 2.21
CCDC17-208ENST00000525599 KDM3BQ7LBC6 1761 aa28.87■■■□□ 2.21
CCDC17-208ENST00000525599 KCPQ6ZWJ8 1503 aa28.87■■■□□ 2.21
CCDC17-208ENST00000525599 CICQ96RK0 1608 aaPredicted RBP28.87■■■□□ 2.21
CCDC17-208ENST00000525599 CCNL1Q9UK58 526 aaPredicted RBP28.86■■■□□ 2.21
CCDC17-208ENST00000525599 SLC39A6Q13433 755 aa28.86■■■□□ 2.21
CCDC17-208ENST00000525599 NUP188Q5SRE5 1749 aa28.85■■■□□ 2.21
CCDC17-208ENST00000525599 IL16Q14005 1332 aa28.84■■■□□ 2.21
CCDC17-208ENST00000525599 WDR63Q8IWG1 891 aa28.84■■■□□ 2.21
CCDC17-208ENST00000525599 VSIG10Q8N0Z9 540 aa28.84■■■□□ 2.21
CCDC17-208ENST00000525599 CFAP44Q96MT7 982 aa28.84■■■□□ 2.21
CCDC17-208ENST00000525599 IFT57Q9NWB7 429 aa28.84■■■□□ 2.21
CCDC17-208ENST00000525599 CHL1O00533 1208 aa28.82■■■□□ 2.2
CCDC17-208ENST00000525599 PTCD1O75127 700 aaKnown RBP28.82■■■□□ 2.2
CCDC17-208ENST00000525599 GNAI1P63096 354 aa28.82■■■□□ 2.2
CCDC17-208ENST00000525599 FMNL2Q96PY5 1086 aa28.82■■■□□ 2.2
CCDC17-208ENST00000525599 RBM42Q9BTD8 480 aaKnown RBP28.82■■■□□ 2.2
CCDC17-208ENST00000525599 LRRC4BQ9NT99 713 aa28.82■■■□□ 2.2
CCDC17-208ENST00000525599 TSPYL4Q9UJ04 414 aa28.82■■■□□ 2.2
CCDC17-208ENST00000525599 TAF1LQ8IZX4 1826 aa28.8■■■□□ 2.2
CCDC17-208ENST00000525599 C5P01031 1676 aa28.8■■■□□ 2.2
CCDC17-208ENST00000525599 ZNF853P0CG23 659 aa28.8■■■□□ 2.2
CCDC17-208ENST00000525599 ATP6V1AP38606 617 aa28.8■■■□□ 2.2
CCDC17-208ENST00000525599 ZNF496Q96IT1 587 aaPredicted RBP28.8■■■□□ 2.2
CCDC17-208ENST00000525599 SALL2Q9Y467 1007 aaPredicted RBP28.79■■■□□ 2.2
CCDC17-208ENST00000525599 ZNF521Q96K83 1311 aa28.79■■■□□ 2.2
CCDC17-208ENST00000525599 HEG1Q9ULI3 1381 aa28.79■■■□□ 2.2
CCDC17-208ENST00000525599 SENP3-EIF4A1A0A087X0R7 540 aa28.78■■■□□ 2.2
CCDC17-208ENST00000525599 SLC4A9Q96Q91 983 aa28.78■■■□□ 2.2
CCDC17-208ENST00000525599 MIS18AQ9NYP9 233 aa28.78■■■□□ 2.2
CCDC17-208ENST00000525599 KCNQ3O43525 872 aa28.77■■■□□ 2.2
CCDC17-208ENST00000525599 TJP1Q07157 1748 aa28.77■■■□□ 2.2
CCDC17-208ENST00000525599 TEX13AQ9BXU3 409 aaPredicted RBP28.77■■■□□ 2.2
CCDC17-208ENST00000525599 COL5A3P25940 1745 aaPredicted RBP28.76■■■□□ 2.19
CCDC17-208ENST00000525599 ITPK1Q13572 414 aa28.76■■■□□ 2.19
CCDC17-208ENST00000525599 NBPF14Q5TI25 921 aa28.76■■■□□ 2.19
CCDC17-208ENST00000525599 LAS1LQ9Y4W2 734 aaKnown RBP28.76■■■□□ 2.19
CCDC17-208ENST00000525599 EIF4A1P60842 406 aaKnown RBP28.75■■■□□ 2.19
CCDC17-208ENST00000525599 SNRPA1P09661 255 aaKnown RBP28.73■■■□□ 2.19
CCDC17-208ENST00000525599 KCNQ4P56696 695 aa28.73■■■□□ 2.19
CCDC17-208ENST00000525599 MBIPQ9NS73 344 aa28.73■■■□□ 2.19
CCDC17-208ENST00000525599 C4BP0C0L5 1744 aa28.73■■■□□ 2.19
CCDC17-208ENST00000525599 LINC00116Q8NCU8 138 aa28.71■■■□□ 2.19
CCDC17-208ENST00000525599 CNTNAP4Q9C0A0 1308 aa28.7■■■□□ 2.19
CCDC17-208ENST00000525599 HNRNPUQ00839 825 aaKnown RBP eCLIP28.7■■■□□ 2.19
CCDC17-208ENST00000525599 RC3H1Q5TC82 1133 aaKnown RBP28.7■■■□□ 2.19
CCDC17-208ENST00000525599 DNAJC10Q8IXB1 793 aa28.7■■■□□ 2.19
CCDC17-208ENST00000525599 STK32BQ9NY57 414 aa28.7■■■□□ 2.19
CCDC17-208ENST00000525599 STARD3NLO95772 234 aa28.69■■■□□ 2.18
CCDC17-208ENST00000525599 AKT1S1Q96B36 256 aa28.69■■■□□ 2.18
CCDC17-208ENST00000525599 GIGYF1O75420 1035 aaPredicted RBP28.69■■■□□ 2.18
CCDC17-208ENST00000525599 GOLGA2Q08379 1002 aa28.69■■■□□ 2.18
CCDC17-208ENST00000525599 MYH16Q9H6N6 1097 aa28.69■■■□□ 2.18
CCDC17-208ENST00000525599 LAMB4A4D0S4 1761 aa28.68■■■□□ 2.18
CCDC17-208ENST00000525599 SLC15A2Q16348 729 aa28.68■■■□□ 2.18
CCDC17-208ENST00000525599 ANO8Q9HCE9 1232 aaPredicted RBP28.68■■■□□ 2.18
CCDC17-208ENST00000525599 HOXB7P09629 217 aa28.67■■■□□ 2.18
CCDC17-208ENST00000525599 CYP19A1P11511 503 aaPredicted RBP28.67■■■□□ 2.18
CCDC17-208ENST00000525599 QSER1Q2KHR3 1735 aa28.66■■■□□ 2.18
CCDC17-208ENST00000525599 AK7Q96M32 723 aa28.66■■■□□ 2.18
CCDC17-208ENST00000525599 SOS1Q07889 1333 aaPredicted RBP28.65■■■□□ 2.18
CCDC17-208ENST00000525599 E9PSI1 815 aa28.65■■■□□ 2.18
CCDC17-208ENST00000525599 CRKLP46109 303 aaKnown RBP28.64■■■□□ 2.18
CCDC17-208ENST00000525599 ZNF827Q17R98 1081 aa28.64■■■□□ 2.18
CCDC17-208ENST00000525599 FANCIQ9NVI1 1328 aa28.64■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms