RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 PHRF1Q9P1Y6 1649 aaKnown RBP20.36■□□□□ 0.85
CCDC90B-203ENST00000525503 DDX11L8A8MPP1 907 aa20.36■□□□□ 0.85
CCDC90B-203ENST00000525503 HSP90AA1P07900 732 aaKnown RBP20.36■□□□□ 0.85
CCDC90B-203ENST00000525503 ATP8B2P98198 1209 aa20.36■□□□□ 0.85
CCDC90B-203ENST00000525503 NECTIN2Q92692 538 aa20.36■□□□□ 0.85
CCDC90B-203ENST00000525503 USP26Q9BXU7 913 aa20.36■□□□□ 0.85
CCDC90B-203ENST00000525503 NPHP4O75161 1426 aaPredicted RBP20.36■□□□□ 0.85
CCDC90B-203ENST00000525503 HOXB7P09629 217 aa20.35■□□□□ 0.85
CCDC90B-203ENST00000525503 RBM33Q96EV2 1170 aaKnown RBP20.35■□□□□ 0.85
CCDC90B-203ENST00000525503 MED1Q15648 1581 aaPredicted RBP20.34■□□□□ 0.85
CCDC90B-203ENST00000525503 REC8O95072 547 aa20.34■□□□□ 0.85
CCDC90B-203ENST00000525503 PDE1AP54750 535 aa20.34■□□□□ 0.85
CCDC90B-203ENST00000525503 LRRCC1Q9C099 1032 aa20.34■□□□□ 0.85
CCDC90B-203ENST00000525503 CACNA1FO60840 1977 aa20.34■□□□□ 0.85
CCDC90B-203ENST00000525503 PLEKHO1Q53GL0 409 aaPredicted RBP20.33■□□□□ 0.85
CCDC90B-203ENST00000525503 ADAMTSL3P82987 1691 aa20.33■□□□□ 0.85
CCDC90B-203ENST00000525503 N4BP2Q86UW6 1770 aaPredicted RBP20.33■□□□□ 0.84
CCDC90B-203ENST00000525503 AMOTQ4VCS5 1084 aa20.33■□□□□ 0.84
CCDC90B-203ENST00000525503 AKAP4Q5JQC9 854 aa20.33■□□□□ 0.84
CCDC90B-203ENST00000525503 L1TD1Q5T7N2 865 aaKnown RBP20.33■□□□□ 0.84
CCDC90B-203ENST00000525503 ZBTB7CA1YPR0 619 aa20.32■□□□□ 0.84
CCDC90B-203ENST00000525503 CD2BP2O95400 341 aaKnown RBP20.32■□□□□ 0.84
CCDC90B-203ENST00000525503 RBM42Q9BTD8 480 aaKnown RBP20.32■□□□□ 0.84
CCDC90B-203ENST00000525503 UBTFL1P0CB47 393 aaPredicted RBP20.31■□□□□ 0.84
CCDC90B-203ENST00000525503 EIF4A1P60842 406 aaKnown RBP20.31■□□□□ 0.84
CCDC90B-203ENST00000525503 GBP4Q96PP9 640 aa20.31■□□□□ 0.84
CCDC90B-203ENST00000525503 EXOC6BQ9Y2D4 811 aa20.31■□□□□ 0.84
CCDC90B-203ENST00000525503 IBTKQ9P2D0 1353 aaPredicted RBP20.31■□□□□ 0.84
CCDC90B-203ENST00000525503 ERC2O15083 957 aa20.31■□□□□ 0.84
CCDC90B-203ENST00000525503 RAB3GAP1Q15042 981 aa20.31■□□□□ 0.84
CCDC90B-203ENST00000525503 LRRFIP2Q9Y608 721 aaKnown RBP20.31■□□□□ 0.84
CCDC90B-203ENST00000525503 SLIT3O75094 1523 aa20.31■□□□□ 0.84
CCDC90B-203ENST00000525503 GCP02774 474 aa20.3■□□□□ 0.84
CCDC90B-203ENST00000525503 PTMSP20962 102 aa20.3■□□□□ 0.84
CCDC90B-203ENST00000525503 TEFQ10587 303 aa20.3■□□□□ 0.84
CCDC90B-203ENST00000525503 ZNF530Q6P9A1 599 aaPredicted RBP20.3■□□□□ 0.84
CCDC90B-203ENST00000525503 ARHGEF25Q86VW2 580 aa20.3■□□□□ 0.84
CCDC90B-203ENST00000525503 NCAPD2Q15021 1401 aa20.3■□□□□ 0.84
CCDC90B-203ENST00000525503 TRAK2O60296 914 aa20.29■□□□□ 0.84
CCDC90B-203ENST00000525503 SRCIN1Q9C0H9 1055 aa20.29■□□□□ 0.84
CCDC90B-203ENST00000525503 USP44Q9H0E7 712 aa20.29■□□□□ 0.84
CCDC90B-203ENST00000525503 LGR6Q9HBX8 967 aa20.29■□□□□ 0.84
CCDC90B-203ENST00000525503 BRPF3Q9ULD4 1205 aa20.29■□□□□ 0.84
CCDC90B-203ENST00000525503 SALL3Q9BXA9 1300 aa20.29■□□□□ 0.84
CCDC90B-203ENST00000525503 PNMA6EA0A0J9YXQ4 647 aa20.29■□□□□ 0.84
CCDC90B-203ENST00000525503 IL27Q8NEV9 243 aa20.29■□□□□ 0.84
CCDC90B-203ENST00000525503 TNPO1Q92973 898 aaKnown RBP20.29■□□□□ 0.84
CCDC90B-203ENST00000525503 OVOS2A0A0G2JMS6 1433 aa20.29■□□□□ 0.84
CCDC90B-203ENST00000525503 LMO7Q8WWI1 1683 aa20.28■□□□□ 0.84
CCDC90B-203ENST00000525503 SETD1BQ9UPS6 1966 aaKnown RBP20.28■□□□□ 0.84
CCDC90B-203ENST00000525503 MX1P20591 662 aa20.27■□□□□ 0.84
CCDC90B-203ENST00000525503 LRRC59Q96AG4 307 aaKnown RBP20.27■□□□□ 0.84
CCDC90B-203ENST00000525503 ORAI2Q96SN7 254 aa20.27■□□□□ 0.84
CCDC90B-203ENST00000525503 PHAXQ9H814 394 aaKnown RBP20.27■□□□□ 0.84
CCDC90B-203ENST00000525503 BTBD11A6QL63 1104 aa20.27■□□□□ 0.84
CCDC90B-203ENST00000525503 C1orf141Q5JVX7 400 aa20.27■□□□□ 0.84
CCDC90B-203ENST00000525503 KDM3BQ7LBC6 1761 aa20.27■□□□□ 0.84
CCDC90B-203ENST00000525503 STAP2Q9UGK3 403 aa20.27■□□□□ 0.84
CCDC90B-203ENST00000525503 AOX1Q06278 1338 aa20.26■□□□□ 0.83
CCDC90B-203ENST00000525503 ST18O60284 1047 aa20.26■□□□□ 0.83
CCDC90B-203ENST00000525503 EIF2S2P20042 333 aaKnown RBP20.26■□□□□ 0.83
CCDC90B-203ENST00000525503 RAB11FIP3O75154 756 aa20.25■□□□□ 0.83
CCDC90B-203ENST00000525503 SSH3Q8TE77 659 aa20.25■□□□□ 0.83
CCDC90B-203ENST00000525503 ANKRD24Q8TF21 1146 aa20.25■□□□□ 0.83
CCDC90B-203ENST00000525503 RNMTO43148 476 aaKnown RBP20.24■□□□□ 0.83
CCDC90B-203ENST00000525503 FOXD4L1Q9NU39 408 aa20.24■□□□□ 0.83
CCDC90B-203ENST00000525503 CHPF2Q9P2E5 772 aa20.24■□□□□ 0.83
CCDC90B-203ENST00000525503 DNAAF4Q8WXU2 420 aa20.23■□□□□ 0.83
CCDC90B-203ENST00000525503 GOLGA6L3A6NEY3 463 aa20.23■□□□□ 0.83
CCDC90B-203ENST00000525503 POLA2Q14181 598 aa20.23■□□□□ 0.83
CCDC90B-203ENST00000525503 SKOR2Q2VWA4 1001 aaPredicted RBP20.23■□□□□ 0.83
CCDC90B-203ENST00000525503 MPRIPQ6WCQ1 1025 aa20.23■□□□□ 0.83
CCDC90B-203ENST00000525503 KRT28Q7Z3Y7 464 aa20.23■□□□□ 0.83
CCDC90B-203ENST00000525503 XPCQ01831 940 aaPredicted RBP20.22■□□□□ 0.83
CCDC90B-203ENST00000525503 LMOD2Q6P5Q4 547 aa20.22■□□□□ 0.83
CCDC90B-203ENST00000525503 PROSER2Q86WR7 435 aaPredicted RBP20.22■□□□□ 0.83
CCDC90B-203ENST00000525503 BEND3Q5T5X7 828 aa20.21■□□□□ 0.83
CCDC90B-203ENST00000525503 ESYT1Q9BSJ8 1104 aa20.21■□□□□ 0.83
CCDC90B-203ENST00000525503 DBF4Q9UBU7 674 aaPredicted RBP20.21■□□□□ 0.83
CCDC90B-203ENST00000525503 KIF1AQ12756 1690 aa20.21■□□□□ 0.83
CCDC90B-203ENST00000525503 MST1RQ04912 1400 aa20.21■□□□□ 0.83
CCDC90B-203ENST00000525503 KCNQ3O43525 872 aa20.21■□□□□ 0.83
CCDC90B-203ENST00000525503 CLEC17AQ6ZS10 378 aa20.21■□□□□ 0.83
CCDC90B-203ENST00000525503 PPP1R42Q7Z4L9 355 aa20.21■□□□□ 0.83
CCDC90B-203ENST00000525503 RGPD2P0DJD1 1756 aa20.21■□□□□ 0.83
CCDC90B-203ENST00000525503 LMTK3Q96Q04 1460 aa20.2■□□□□ 0.82
CCDC90B-203ENST00000525503 FSD2A1L4K1 749 aa20.2■□□□□ 0.82
CCDC90B-203ENST00000525503 MCCP23508 829 aa20.2■□□□□ 0.82
CCDC90B-203ENST00000525503 GZF1Q9H116 711 aaPredicted RBP20.2■□□□□ 0.82
CCDC90B-203ENST00000525503 CWC22Q9HCG8 908 aaKnown RBP20.2■□□□□ 0.82
CCDC90B-203ENST00000525503 TRPM3Q9HCF6 1732 aaPredicted RBP20.2■□□□□ 0.82
CCDC90B-203ENST00000525503 CAMTA1Q9Y6Y1 1673 aa20.2■□□□□ 0.82
CCDC90B-203ENST00000525503 PI4KAP2A4QPH2 592 aa20.19■□□□□ 0.82
CCDC90B-203ENST00000525503 TRIM6-TRIM34B2RNG4 842 aa20.19■□□□□ 0.82
CCDC90B-203ENST00000525503 GOLGA6L22H0YM25 854 aa20.19■□□□□ 0.82
CCDC90B-203ENST00000525503 NUCB2P80303 420 aa20.19■□□□□ 0.82
CCDC90B-203ENST00000525503 TSHZ3Q63HK5 1081 aa20.19■□□□□ 0.82
CCDC90B-203ENST00000525503 PI4KAP1Q8N8J0 262 aa20.19■□□□□ 0.82
CCDC90B-203ENST00000525503 HSP90AB4PQ58FF6 505 aa20.19■□□□□ 0.82
CCDC90B-203ENST00000525503 C19orf44Q9H6X5 657 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms