RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 CABP4P57796 275 aa20.59■□□□□ 0.89
TSPAN4-213ENST00000524895 TSR2Q969E8 191 aaKnown RBP20.59■□□□□ 0.89
TSPAN4-213ENST00000524895 DUSP27Q5VZP5 1158 aa20.58■□□□□ 0.89
TSPAN4-213ENST00000524895 TSPYL4Q9UJ04 414 aa20.58■□□□□ 0.89
TSPAN4-213ENST00000524895 CHL1O00533 1208 aa20.57■□□□□ 0.88
TSPAN4-213ENST00000524895 RGS12O14924 1447 aa20.57■□□□□ 0.88
TSPAN4-213ENST00000524895 TRMT2AQ8IZ69 625 aaKnown RBP20.57■□□□□ 0.88
TSPAN4-213ENST00000524895 MBIPQ9NS73 344 aa20.57■□□□□ 0.88
TSPAN4-213ENST00000524895 BABAM1Q9NWV8 329 aa20.57■□□□□ 0.88
TSPAN4-213ENST00000524895 BRWD3Q6RI45 1802 aa20.56■□□□□ 0.88
TSPAN4-213ENST00000524895 BTBD11A6QL63 1104 aa20.56■□□□□ 0.88
TSPAN4-213ENST00000524895 NFATC2IPQ8NCF5 419 aa20.56■□□□□ 0.88
TSPAN4-213ENST00000524895 MIS18AQ9NYP9 233 aa20.56■□□□□ 0.88
TSPAN4-213ENST00000524895 KDM3BQ7LBC6 1761 aa20.56■□□□□ 0.88
TSPAN4-213ENST00000524895 TMOD3Q9NYL9 352 aa20.55■□□□□ 0.88
TSPAN4-213ENST00000524895 KRT27Q7Z3Y8 459 aa20.54■□□□□ 0.88
TSPAN4-213ENST00000524895 SYTL4Q96C24 671 aaPredicted RBP20.54■□□□□ 0.88
TSPAN4-213ENST00000524895 ITGB4P16144 1822 aa20.53■□□□□ 0.88
TSPAN4-213ENST00000524895 ACSBG1Q96GR2 724 aa20.52■□□□□ 0.88
TSPAN4-213ENST00000524895 PAPPAQ13219 1627 aa20.52■□□□□ 0.88
TSPAN4-213ENST00000524895 BCL9O00512 1426 aa20.52■□□□□ 0.87
TSPAN4-213ENST00000524895 PRIM1P49642 420 aaKnown RBP20.51■□□□□ 0.87
TSPAN4-213ENST00000524895 EXOSC9Q06265 439 aaKnown RBP20.51■□□□□ 0.87
TSPAN4-213ENST00000524895 FAM182BQ5T319 152 aa20.51■□□□□ 0.87
TSPAN4-213ENST00000524895 TTC5Q8N0Z6 440 aa20.5■□□□□ 0.87
TSPAN4-213ENST00000524895 NHSQ6T4R5 1651 aa20.5■□□□□ 0.87
TSPAN4-213ENST00000524895 PIGBQ92521 554 aa20.49■□□□□ 0.87
TSPAN4-213ENST00000524895 SLC39A6Q13433 755 aa20.48■□□□□ 0.87
TSPAN4-213ENST00000524895 ZNF790Q6PG37 636 aa20.48■□□□□ 0.87
TSPAN4-213ENST00000524895 KCNQ3O43525 872 aa20.47■□□□□ 0.87
TSPAN4-213ENST00000524895 FAM196AQ6ZSG2 479 aa20.47■□□□□ 0.87
TSPAN4-213ENST00000524895 UBR2Q8IWV8 1755 aa20.46■□□□□ 0.87
TSPAN4-213ENST00000524895 KCNQ2O43526 872 aa20.45■□□□□ 0.86
TSPAN4-213ENST00000524895 CT47B1P0C2W7 299 aaPredicted RBP20.45■□□□□ 0.86
TSPAN4-213ENST00000524895 EIF4A1P60842 406 aaKnown RBP20.45■□□□□ 0.86
TSPAN4-213ENST00000524895 C8orf58Q8NAV2 365 aa20.45■□□□□ 0.86
TSPAN4-213ENST00000524895 SBF2Q86WG5 1849 aa20.45■□□□□ 0.86
TSPAN4-213ENST00000524895 KCPQ6ZWJ8 1503 aa20.44■□□□□ 0.86
TSPAN4-213ENST00000524895 KRT24Q2M2I5 525 aa20.44■□□□□ 0.86
TSPAN4-213ENST00000524895 TWISTNBQ3B726 338 aaPredicted RBP20.44■□□□□ 0.86
TSPAN4-213ENST00000524895 KAT6BQ8WYB5 2073 aa20.43■□□□□ 0.86
TSPAN4-213ENST00000524895 ELL2O00472 640 aaPredicted RBP20.43■□□□□ 0.86
TSPAN4-213ENST00000524895 TSPYL6Q8N831 410 aa20.43■□□□□ 0.86
TSPAN4-213ENST00000524895 FMNL2Q96PY5 1086 aa20.43■□□□□ 0.86
TSPAN4-213ENST00000524895 ATG3Q9NT62 314 aa20.43■□□□□ 0.86
TSPAN4-213ENST00000524895 ASAP1Q9ULH1 1129 aa20.43■□□□□ 0.86
TSPAN4-213ENST00000524895 ZNF496Q96IT1 587 aaPredicted RBP20.42■□□□□ 0.86
TSPAN4-213ENST00000524895 RCAN3Q9UKA8 241 aa20.42■□□□□ 0.86
TSPAN4-213ENST00000524895 BTAF1O14981 1849 aa20.41■□□□□ 0.86
TSPAN4-213ENST00000524895 SOS1Q07889 1333 aaPredicted RBP20.41■□□□□ 0.86
TSPAN4-213ENST00000524895 PTCD1O75127 700 aaKnown RBP20.4■□□□□ 0.86
TSPAN4-213ENST00000524895 HOXB7P09629 217 aa20.4■□□□□ 0.86
TSPAN4-213ENST00000524895 SMARCC1Q92922 1105 aaPredicted RBP20.4■□□□□ 0.86
TSPAN4-213ENST00000524895 HEG1Q9ULI3 1381 aa20.4■□□□□ 0.86
TSPAN4-213ENST00000524895 C5P01031 1676 aa20.39■□□□□ 0.86
TSPAN4-213ENST00000524895 PALLDQ8WX93 1383 aa20.39■□□□□ 0.85
TSPAN4-213ENST00000524895 VAMP4O75379 141 aa20.39■□□□□ 0.85
TSPAN4-213ENST00000524895 ZNF428Q96B54 188 aa20.39■□□□□ 0.85
TSPAN4-213ENST00000524895 BCL11BQ9C0K0 894 aaPredicted RBP20.39■□□□□ 0.85
TSPAN4-213ENST00000524895 GIGYF1O75420 1035 aaPredicted RBP20.38■□□□□ 0.85
TSPAN4-213ENST00000524895 PTF1AQ7RTS3 328 aa20.38■□□□□ 0.85
TSPAN4-213ENST00000524895 RBM42Q9BTD8 480 aaKnown RBP20.38■□□□□ 0.85
TSPAN4-213ENST00000524895 LAMB4A4D0S4 1761 aa20.38■□□□□ 0.85
TSPAN4-213ENST00000524895 TRIM37O94972 964 aa20.37■□□□□ 0.85
TSPAN4-213ENST00000524895 SNRPA1P09661 255 aaKnown RBP20.37■□□□□ 0.85
TSPAN4-213ENST00000524895 RARSP54136 660 aaKnown RBP20.36■□□□□ 0.85
TSPAN4-213ENST00000524895 HDGFL1Q5TGJ6 251 aa20.36■□□□□ 0.85
TSPAN4-213ENST00000524895 CHMP4AQ9BY43 222 aa20.36■□□□□ 0.85
TSPAN4-213ENST00000524895 ALDH1L2Q3SY69 923 aa20.35■□□□□ 0.85
TSPAN4-213ENST00000524895 VSIG10Q8N0Z9 540 aa20.35■□□□□ 0.85
TSPAN4-213ENST00000524895 SMC4Q9NTJ3 1288 aa20.35■□□□□ 0.85
TSPAN4-213ENST00000524895 PRAMEF22A3QJZ6 481 aa20.34■□□□□ 0.85
TSPAN4-213ENST00000524895 EIF2S2P20042 333 aaKnown RBP20.34■□□□□ 0.85
TSPAN4-213ENST00000524895 BCL2L13Q9BXK5 485 aa20.34■□□□□ 0.85
TSPAN4-213ENST00000524895 CCDC30Q5VVM6 783 aa20.33■□□□□ 0.85
TSPAN4-213ENST00000524895 SSH1Q8WYL5 1049 aa20.33■□□□□ 0.85
TSPAN4-213ENST00000524895 NECTIN2Q92692 538 aa20.33■□□□□ 0.85
TSPAN4-213ENST00000524895 STK31Q9BXU1 1019 aa20.33■□□□□ 0.85
TSPAN4-213ENST00000524895 TJP1Q07157 1748 aa20.33■□□□□ 0.84
TSPAN4-213ENST00000524895 CICQ96RK0 1608 aaPredicted RBP20.32■□□□□ 0.84
TSPAN4-213ENST00000524895 LOC102724428A0A0B4J2F2 783 aa20.32■□□□□ 0.84
TSPAN4-213ENST00000524895 TCERG1O14776 1098 aaKnown RBP20.32■□□□□ 0.84
TSPAN4-213ENST00000524895 SIK1P57059 783 aa20.32■□□□□ 0.84
TSPAN4-213ENST00000524895 TNS1Q9HBL0 1735 aaKnown RBP20.31■□□□□ 0.84
TSPAN4-213ENST00000524895 BCAR3O75815 825 aa20.31■□□□□ 0.84
TSPAN4-213ENST00000524895 TEX13AQ9BXU3 409 aaPredicted RBP20.31■□□□□ 0.84
TSPAN4-213ENST00000524895 ZNF831Q5JPB2 1677 aa20.31■□□□□ 0.84
TSPAN4-213ENST00000524895 EP400Q96L91 3159 aa20.31■□□□□ 0.84
TSPAN4-213ENST00000524895 LY75O60449 1722 aa20.3■□□□□ 0.84
TSPAN4-213ENST00000524895 ATP6V1AP38606 617 aa20.3■□□□□ 0.84
TSPAN4-213ENST00000524895 DNAJC10Q8IXB1 793 aa20.3■□□□□ 0.84
TSPAN4-213ENST00000524895 SLC4A9Q96Q91 983 aa20.3■□□□□ 0.84
TSPAN4-213ENST00000524895 SUPT16HQ9Y5B9 1047 aaKnown RBP20.3■□□□□ 0.84
TSPAN4-213ENST00000524895 USP16Q9Y5T5 823 aa20.29■□□□□ 0.84
TSPAN4-213ENST00000524895 KIF16BQ96L93 1317 aa20.28■□□□□ 0.84
TSPAN4-213ENST00000524895 STARD3NLO95772 234 aa20.28■□□□□ 0.84
TSPAN4-213ENST00000524895 CANXP27824 592 aaKnown RBP20.28■□□□□ 0.84
TSPAN4-213ENST00000524895 MRPL50Q8N5N7 158 aaKnown RBP20.28■□□□□ 0.84
TSPAN4-213ENST00000524895 CHPF2Q9P2E5 772 aa20.28■□□□□ 0.84
TSPAN4-213ENST00000524895 SLC4A2P04920 1241 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms